RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 RAB42Q8N4Z0 105 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 VPS45Q9NRW7 570 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 COL15A1P39059 1388 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 FLT1P17948 1338 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 IDH3BO43837 385 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 USP39Q53GS9 565 aaKnown RBP13.03□□□□□ -0.32
USP38-201ENST00000307017 BNC2Q6ZN30 1099 aaPredicted RBP13.03□□□□□ -0.32
USP38-201ENST00000307017 ATG14Q6ZNE5 492 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 ZKSCAN4Q969J2 545 aaPredicted RBP13.03□□□□□ -0.32
USP38-201ENST00000307017 EPB41L4AQ9HCS5 686 aaPredicted RBP13.03□□□□□ -0.32
USP38-201ENST00000307017 SNPHO15079 494 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 FYNP06241 537 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 CCSAPQ6IQ19 270 aaPredicted RBP13.03□□□□□ -0.32
USP38-201ENST00000307017 CBWD2Q8IUF1 395 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 RHBGQ9H310 441 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 FBXO28Q9NVF7 368 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 WBP11Q9Y2W2 641 aaKnown RBP13.03□□□□□ -0.32
USP38-201ENST00000307017 KDM5DQ9BY66 1539 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 PRR36Q9H6K5 1346 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 TCOF1Q13428 1488 aaKnown RBP13.03□□□□□ -0.32
USP38-201ENST00000307017 A0A1W2PQC6 194 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 VWA5AO00534 786 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 BUD23O43709 281 aaKnown RBP13.03□□□□□ -0.32
USP38-201ENST00000307017 RXRBP28702 533 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 CCT8P50990 548 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 TOMM20Q15388 145 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 POTEAQ6S8J7 498 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 SCIMPQ6UWF3 145 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 FEM1CQ96JP0 617 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 TNIP3Q96KP6 325 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 ILKAPQ9H0C8 392 aaPredicted RBP13.03□□□□□ -0.32
USP38-201ENST00000307017 SMARCAD1Q9H4L7 1026 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 STK39Q9UEW8 545 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 CYP19A1P11511 503 aaPredicted RBP13.02□□□□□ -0.32
USP38-201ENST00000307017 ATN1P54259 1190 aaPredicted RBP13.02□□□□□ -0.32
USP38-201ENST00000307017 FGD3Q5JSP0 725 aa13.02□□□□□ -0.32
USP38-201ENST00000307017 RAET1EQ8TD07 263 aa13.02□□□□□ -0.32
USP38-201ENST00000307017 TSPAN17Q96FV3 270 aa13.02□□□□□ -0.32
USP38-201ENST00000307017 PDLIM2Q96JY6 352 aa13.02□□□□□ -0.32
USP38-201ENST00000307017 PWWP2AQ96N64 755 aa13.02□□□□□ -0.32
USP38-201ENST00000307017 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.02□□□□□ -0.32
USP38-201ENST00000307017 DPP3Q9NY33 737 aa13.02□□□□□ -0.32
USP38-201ENST00000307017 ROBO2Q9HCK4 1378 aa13.02□□□□□ -0.32
USP38-201ENST00000307017 CDH2P19022 906 aaPredicted RBP13.02□□□□□ -0.32
USP38-201ENST00000307017 KPNB1Q14974 876 aaKnown RBP13.02□□□□□ -0.32
USP38-201ENST00000307017 PDZK1Q5T2W1 519 aa13.02□□□□□ -0.32
USP38-201ENST00000307017 TOR3AQ9H497 397 aa13.02□□□□□ -0.32
USP38-201ENST00000307017 CRYL1Q9Y2S2 319 aa13.02□□□□□ -0.32
USP38-201ENST00000307017 RPS6KA5O75582 802 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 FUT4P22083 530 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 CDH18Q13634 790 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 ATP6AP1LQ52LC2 224 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 FAM182AQ5T1J6 154 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 TRIM72Q6ZMU5 477 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 ZBTB49Q6ZSB9 765 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 DSG4Q86SJ6 1040 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 MARCH7Q9H992 704 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 IL1RAPL1Q9NZN1 696 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 ACO1P21399 889 aaKnown RBP13.02□□□□□ -0.33
USP38-201ENST00000307017 ATG9AQ7Z3C6 839 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 WDR36Q8NI36 951 aaKnown RBP13.02□□□□□ -0.33
USP38-201ENST00000307017 SPPL2AQ8TCT8 520 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 NT5C1AQ9BXI3 368 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 ALDH1A1P00352 501 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 ASS1P00966 412 aaKnown RBP13.02□□□□□ -0.33
USP38-201ENST00000307017 SSTR1P30872 391 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 ANTXR2P58335 489 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 ARMC3Q5W041 872 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 NPNTQ6UXI9 565 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 CACTIN-AS1Q8N1I8 211 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 GIMAP8Q8ND71 665 aaPredicted RBP13.02□□□□□ -0.33
USP38-201ENST00000307017 MAGEB18Q96M61 343 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 SEMA4AQ9H3S1 761 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 SYBUQ9NX95 663 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 MED24O75448 989 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 ATP6V1C1P21283 382 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 SFNP31947 248 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 PLCL1Q15111 1095 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 FAM83EQ2M2I3 478 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 BBS7Q8IWZ6 715 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 PCDH20Q8N6Y1 951 aaKnown RBP13.02□□□□□ -0.33
USP38-201ENST00000307017 CLIP3Q96DZ5 547 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 FAM167AQ96KS9 214 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 BLOC1S6Q9UL45 172 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 SHOC2Q9UQ13 582 aa13.02□□□□□ -0.33
USP38-201ENST00000307017 LBPP18428 481 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 RBP5P82980 135 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 PPP1R10Q96QC0 940 aaKnown RBP13.01□□□□□ -0.33
USP38-201ENST00000307017 CBWD1Q9BRT8 395 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 PSD3Q9NYI0 1048 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 PAK5Q9P286 719 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 COG5Q9UP83 839 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 PCDHB7Q9Y5E2 793 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 EFEMP1Q12805 493 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 ARMCX4Q5H9R4 360 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 ACAD10Q6JQN1 1059 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 WDR93Q6P2C0 686 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 PIM2Q9P1W9 311 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 KLHL20Q9Y2M5 609 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 LYVE1Q9Y5Y7 322 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms