RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 EXOC4Q96A65 974 aa17.8■□□□□ 0.44
NDUFA3-201ENST00000303553 ZFYVE19Q96K21 471 aa17.8■□□□□ 0.44
NDUFA3-201ENST00000303553 FAM83CQ9BQN1 747 aa17.8■□□□□ 0.44
NDUFA3-201ENST00000303553 RNF38Q9H0F5 515 aa17.8■□□□□ 0.44
NDUFA3-201ENST00000303553 VPS16Q9H269 839 aa17.8■□□□□ 0.44
NDUFA3-201ENST00000303553 CCSER2Q9H7U1 834 aa17.8■□□□□ 0.44
NDUFA3-201ENST00000303553 SIX2Q9NPC8 291 aa17.8■□□□□ 0.44
NDUFA3-201ENST00000303553 GKN1Q9NS71 199 aa17.8■□□□□ 0.44
NDUFA3-201ENST00000303553 DUS2Q9NX74 493 aaKnown RBP17.8■□□□□ 0.44
NDUFA3-201ENST00000303553 CLIC5Q9NZA1 410 aa17.8■□□□□ 0.44
NDUFA3-201ENST00000303553 LIMA1Q9UHB6 759 aaKnown RBP17.8■□□□□ 0.44
NDUFA3-201ENST00000303553 NAGPAQ9UK23 515 aa17.8■□□□□ 0.44
NDUFA3-201ENST00000303553 SIT1Q9Y3P8 196 aa17.8■□□□□ 0.44
NDUFA3-201ENST00000303553 ARIH1Q9Y4X5 557 aaPredicted RBP17.8■□□□□ 0.44
NDUFA3-201ENST00000303553 SYCE3A1L190 88 aa17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 BECN2A8MW95 431 aa17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 LEFTY2O00292 366 aa17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 CAVIN2O95810 425 aa17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 ZBED1O96006 694 aa17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 ZNF18P17022 549 aa17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 ATP5C1P36542 298 aaKnown RBP17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 MAGEA9P43362 315 aa17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 ZNF165P49910 485 aa17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 VCPP55072 806 aaKnown RBP17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 BPIFB4P59827 614 aa17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 PTK2Q05397 1052 aa17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 RUNX3Q13761 415 aa17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 UBXN2BQ14CS0 331 aa17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 UBA3Q8TBC4 463 aa17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 SECISBP2LQ93073 1101 aaKnown RBP17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 LSM14BQ9BX40 385 aaKnown RBP17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 LTB4R2Q9NPC1 389 aa17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 PLCB1Q9NQ66 1216 aa17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 CNGB3Q9NQW8 809 aa17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 ZNF318Q5VUA4 2279 aa17.79■□□□□ 0.44
NDUFA3-201ENST00000303553 A0A1W2PQH9 124 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 THAP12O43422 761 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 NFATC1O95644 943 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 RARGP13631 454 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 COPB1P53618 953 aaKnown RBP17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 TPM4P67936 248 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 ADIGQ0VDE8 80 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 NR1H3Q13133 447 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 RAPGEF1Q13905 1077 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 NCAPHQ15003 741 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 KLHDC7AQ5VTJ3 777 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 SCML4Q8N228 414 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 TMEM105Q8N8V8 129 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 SLC35F5Q8WV83 523 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 ZNF606Q8WXB4 792 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 FAM3CQ92520 227 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 HSFY1Q96LI6 401 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 SMPD4Q9NXE4 827 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 GTSE1Q9NYZ3 720 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 TBC1D14Q9P2M4 693 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 DNMT3LQ9UJW3 386 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 SH3BP1Q9Y3L3 701 aa17.78■□□□□ 0.44
NDUFA3-201ENST00000303553 ZDBF2Q9HCK1 2354 aa17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 E2F8A0AVK6 867 aa17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 LRRC10BA6NIK2 292 aa17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 LGALS16A8MUM7 142 aa17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 SPECC1L-ADORA2AF8WAN1 911 aa17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 FBXO21O94952 628 aa17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 UCHL3P15374 230 aa17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 CTHP32929 405 aa17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 ACADSBP45954 432 aa17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 APBA1Q02410 837 aa17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 KCNMA1Q12791 1236 aa17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 C10orf120Q5SQS8 335 aa17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 IER5LQ5T953 404 aa17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 PM20D1Q6GTS8 502 aa17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 RSRC2Q7L4I2 434 aaKnown RBP17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 GOLGA1Q92805 767 aa17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 OTUB2Q96DC9 234 aa17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 ZSWIM1Q9BR11 485 aa17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 FOXQ1Q9C009 403 aa17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 EBF3Q9H4W6 596 aa17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 OLA1Q9NTK5 396 aaKnown RBP17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 CFAP97Q9P2B7 532 aa17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 LSM7Q9UK45 103 aaKnown RBP17.77■□□□□ 0.44
NDUFA3-201ENST00000303553 FAM170BA6NMN3 283 aa17.76■□□□□ 0.43
NDUFA3-201ENST00000303553 TULP2O00295 520 aa17.76■□□□□ 0.43
NDUFA3-201ENST00000303553 SART1O43290 800 aaKnown RBP17.76■□□□□ 0.43
NDUFA3-201ENST00000303553 YWHAGP61981 247 aaKnown RBP eCLIP17.76■□□□□ 0.43
NDUFA3-201ENST00000303553 TNK2Q07912 1038 aa17.76■□□□□ 0.43
NDUFA3-201ENST00000303553 TRIM68Q6AZZ1 485 aa17.76■□□□□ 0.43
NDUFA3-201ENST00000303553 CCDC105Q8IYK2 499 aa17.76■□□□□ 0.43
NDUFA3-201ENST00000303553 RIN3Q8TB24 985 aa17.76■□□□□ 0.43
NDUFA3-201ENST00000303553 STK32AQ8WU08 396 aa17.76■□□□□ 0.43
NDUFA3-201ENST00000303553 IRGQQ8WZA9 623 aa17.76■□□□□ 0.43
NDUFA3-201ENST00000303553 PCMTD1Q96MG8 357 aaPredicted RBP17.76■□□□□ 0.43
NDUFA3-201ENST00000303553 NOX5Q96PH1 765 aa17.76■□□□□ 0.43
NDUFA3-201ENST00000303553 FUCA2Q9BTY2 467 aa17.76■□□□□ 0.43
NDUFA3-201ENST00000303553 TRIM62Q9BVG3 475 aa17.76■□□□□ 0.43
NDUFA3-201ENST00000303553 ULBP1Q9BZM6 244 aa17.76■□□□□ 0.43
NDUFA3-201ENST00000303553 IRF2BPLQ9H1B7 796 aa17.76■□□□□ 0.43
NDUFA3-201ENST00000303553 NMUR1Q9HB89 426 aa17.76■□□□□ 0.43
NDUFA3-201ENST00000303553 HPS4Q9NQG7 708 aa17.76■□□□□ 0.43
NDUFA3-201ENST00000303553 STRIP2Q9ULQ0 834 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms