RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 CACNA2D2Q9NY47 1150 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 ETAA1Q9NY74 926 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 KCNK4Q9NYG8 393 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 SFMBT1Q9UHJ3 866 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 SMIM31A0A1B0GVY4 71 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 SAMD4BQ5PRF9 694 aaKnown RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 GRTP1Q5TC63 336 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 TMC5Q6UXY8 1006 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 PALB2Q86YC2 1186 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 STK32AQ8WU08 396 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 SLC20A1Q8WUM9 679 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 MPP4Q96JB8 637 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 CCDC28BQ9BUN5 200 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 ARMC7Q9H6L4 198 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 TCF7L2Q9NQB0 619 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 TPRKBQ9Y3C4 175 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 ACTL7BQ9Y614 415 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 FAM25AB3EWG3 89 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 FAM25CB3EWG5 89 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 FAM25GB3EWG6 89 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 RHOBTB1O94844 696 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 FOXD4Q12950 439 aaPredicted RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 ATP6AP1LQ52LC2 224 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 ATP8B4Q8TF62 1192 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 THUMPD3Q9BV44 507 aaKnown RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 ZSCAN32Q9NX65 697 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 HPS5Q9UPZ3 1129 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 HPSEQ9Y251 543 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 HOXB8P17481 243 aaPredicted RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 GNL1P36915 607 aaPredicted RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 ETFBP38117 255 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 HARS2P49590 506 aaKnown RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 ZNF135P52742 658 aaPredicted RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 NET1Q7Z628 596 aaPredicted RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 PGM2Q96G03 612 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 AGAP3Q96P47 875 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 THAP2Q9H0W7 228 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 SPACA6W5XKT8 324 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 ZNF862O60290 1169 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 UBOX5O94941 541 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 ANXA6P08133 673 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 CRABP2P29373 138 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 BLVRAP53004 296 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 LRRC74AQ0VAA2 488 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 SMTNL2Q2TAL5 461 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 AADATQ8N5Z0 425 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 ZNF398Q8TD17 642 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 SEPT1Q8WYJ6 367 aa7.88□□□□□ -1.15
SF3B3-201ENST00000302516 PABPC5Q96DU9 382 aaKnown RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 PIN4Q9Y237 131 aaKnown RBP7.88□□□□□ -1.15
SF3B3-201ENST00000302516 ZBTB39O15060 712 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 HOXD10P28358 340 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 SOAT1P35610 550 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 CAPZA2P47755 286 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 COX10Q12887 443 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 TRIM25Q14258 630 aaKnown RBP7.87□□□□□ -1.15
SF3B3-201ENST00000302516 KCNT1Q5JUK3 1230 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 B3GNT6Q6ZMB0 384 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 DPP10Q8N608 796 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 OR6Y1Q8NGX8 325 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 GPRASP2Q96D09 838 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 TBCBQ99426 244 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 UGT2B28Q9BY64 529 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 GDF3Q9NR23 364 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 KBTBD4Q9NVX7 518 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.87□□□□□ -1.15
SF3B3-201ENST00000302516 KIDINS220Q9ULH0 1771 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 UBXN8O00124 270 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 CRTAMO95727 393 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 PGAM1P18669 254 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 ST8SIA6P61647 398 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 TWF1Q12792 350 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 DCAF6Q58WW2 860 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 PPP1R10Q96QC0 940 aaKnown RBP7.87□□□□□ -1.15
SF3B3-201ENST00000302516 MXRA8Q9BRK3 442 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 VTA1Q9NP79 307 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 TMEM114B3SHH9 223 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 AKR1B1P15121 316 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 DNAJB2P25686 324 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 MMP14P50281 582 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 TOP3AQ13472 1001 aaPredicted RBP7.87□□□□□ -1.15
SF3B3-201ENST00000302516 GPR63Q9BZJ6 419 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 TBC1D13Q9NVG8 400 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 ERAP1Q9NZ08 941 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 STK39Q9UEW8 545 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 CD163L1Q9NR16 1453 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 TPBGLP0DKB5 382 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 IL12RB1P42701 662 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 BCAT1P54687 386 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 XIAPP98170 497 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 ZDHHC17Q8IUH5 632 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 KRT78Q8N1N4 520 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.87□□□□□ -1.15
SF3B3-201ENST00000302516 FAM84BQ96KN1 310 aaPredicted RBP7.87□□□□□ -1.15
SF3B3-201ENST00000302516 DEPDC7Q96QD5 511 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 PRKD2Q9BZL6 878 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 PHACTR1Q9C0D0 580 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 USP18Q9UMW8 372 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 MAPRE3Q9UPY8 281 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms