RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 SULT2A1Q06520 285 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 BRDTQ58F21 947 aaPredicted RBP11.31□□□□□ -0.6
ZNF558-201ENST00000301475 TDRD10Q5VZ19 366 aaKnown RBP11.31□□□□□ -0.6
ZNF558-201ENST00000301475 TMEM179Q6ZVK1 233 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 CTAGE3PQ8IX95 158 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 MARVELD2Q8N4S9 558 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 FAM71DQ8N9W8 422 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 CLMNQ96JQ2 1002 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 MMP19Q99542 508 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 RIT2Q99578 217 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 FAM213AQ9BRX8 229 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 PCDHB4Q9Y5E5 795 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 ASTN2O75129 1339 aaPredicted RBP11.31□□□□□ -0.6
ZNF558-201ENST00000301475 LTBP1Q14766 1721 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 RGPD3A6NKT7 1758 aaPredicted RBP11.31□□□□□ -0.6
ZNF558-201ENST00000301475 RGPD4Q7Z3J3 1758 aa11.31□□□□□ -0.6
ZNF558-201ENST00000301475 TTLL13PA6NNM8 815 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 DHX15O43143 795 aaKnown RBP11.3□□□□□ -0.6
ZNF558-201ENST00000301475 DNAJA2O60884 412 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 LYPLA1O75608 230 aaPredicted RBP11.3□□□□□ -0.6
ZNF558-201ENST00000301475 SETSIPP0DME0 302 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 TSHRP16473 764 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 AOC3Q16853 763 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 KCNT1Q5JUK3 1230 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 OGFRL1Q5TC84 451 aaPredicted RBP11.3□□□□□ -0.6
ZNF558-201ENST00000301475 TTC39BQ5VTQ0 682 aaPredicted RBP11.3□□□□□ -0.6
ZNF558-201ENST00000301475 SLC26A11Q86WA9 606 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 ICA1LQ8NDH6 482 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 SNRNP27Q8WVK2 155 aaKnown RBP11.3□□□□□ -0.6
ZNF558-201ENST00000301475 RSAD2Q8WXG1 361 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 LZICQ8WZA0 190 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 JADE3Q92613 823 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 PDGFDQ9GZP0 370 aaPredicted RBP11.3□□□□□ -0.6
ZNF558-201ENST00000301475 PLAC1Q9HBJ0 212 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 KCNH7Q9NS40 1196 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 LZTS1Q9Y250 596 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 DTNAQ9Y4J8 743 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 MAD1L1Q9Y6D9 718 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 SPDYE2BA6NHP3 402 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 CD48P09326 243 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 SPDYE6P0CI01 402 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 SLC5A2P31639 672 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 COPAP53621 1224 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 ADARP55265 1226 aaKnown RBP11.3□□□□□ -0.6
ZNF558-201ENST00000301475 CDK18Q07002 472 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 WASHC5Q12768 1159 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 SPDYE2Q495Y8 402 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 TRIM42Q8IWZ5 723 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 IL31RAQ8NI17 732 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 PIP4K2CQ8TBX8 421 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 ACTRT2Q8TDY3 377 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 CFAP36Q96G28 342 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 DCUN1D1Q96GG9 259 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 APOL6Q9BWW8 343 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 SMYD2Q9NRG4 433 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 RGS17Q9UGC6 210 aaPredicted RBP11.3□□□□□ -0.6
ZNF558-201ENST00000301475 EXOC7Q9UPT5 735 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 ITM2AO43736 263 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 VNN1O95497 513 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 IL1R2P27930 398 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 L1CAMP32004 1257 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 QARSP47897 775 aaKnown RBP11.3□□□□□ -0.6
ZNF558-201ENST00000301475 RPL26P61254 145 aaKnown RBP11.3□□□□□ -0.6
ZNF558-201ENST00000301475 MYBPC1Q00872 1141 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 CUL2Q13617 745 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 C1QTNF12Q5T7M4 302 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 ANGEL2Q5VTE6 544 aaKnown RBP11.3□□□□□ -0.6
ZNF558-201ENST00000301475 SCARA3Q6AZY7 606 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 TATDN1Q6P1N9 297 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 KBTBD6Q86V97 674 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 GPD1LQ8N335 351 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 MXRA8Q9BRK3 442 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 XAB2Q9HCS7 855 aaKnown RBP11.3□□□□□ -0.6
ZNF558-201ENST00000301475 APPL1Q9UKG1 709 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 AGTPBP1Q9UPW5 1226 aa11.3□□□□□ -0.6
ZNF558-201ENST00000301475 PEX1O43933 1283 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 SIN3BO75182 1162 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 ITGBL1O95965 494 aaPredicted RBP11.29□□□□□ -0.6
ZNF558-201ENST00000301475 GH2P01242 217 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 BPGMP07738 259 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 SNRPAP09012 282 aaKnown RBP11.29□□□□□ -0.6
ZNF558-201ENST00000301475 ITGAXP20702 1163 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 ALDH1A3P47895 512 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 IRX4P78413 519 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 PLOD1Q02809 727 aaPredicted RBP11.29□□□□□ -0.6
ZNF558-201ENST00000301475 TMED1Q13445 227 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 ABCB5Q2M3G0 1257 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 ZACNQ401N2 412 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 WDR44Q5JSH3 913 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 DNAJC24Q6P3W2 148 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 DCUN1D2Q6PH85 259 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 ATG14Q6ZNE5 492 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 MAVSQ7Z434 540 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 DEFB107AQ8IZN7 70 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 TTC13Q8NBP0 860 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 CEP70Q8NHQ1 597 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 FAM198AQ9UFP1 575 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 HNRNPDLO14979 420 aaKnown RBP11.29□□□□□ -0.6
ZNF558-201ENST00000301475 DENRO43583 198 aaKnown RBP11.29□□□□□ -0.6
ZNF558-201ENST00000301475 ZMPSTE24O75844 475 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms