RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 HOXA11P31270 313 aaPredicted RBP14.11□□□□□ -0.15
TTC39B-201ENST00000297615 SESN3P58005 492 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 CCNA1P78396 465 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 CAV1Q03135 178 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 LACTB2Q53H82 288 aaPredicted RBP14.11□□□□□ -0.15
TTC39B-201ENST00000297615 DCAF6Q58WW2 860 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 CDCA2Q69YH5 1023 aaPredicted RBP14.11□□□□□ -0.15
TTC39B-201ENST00000297615 PNPLA1Q8N8W4 532 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 ARRDC4Q8NCT1 418 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 EDEM1Q92611 657 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 TMEM109Q9BVC6 243 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 UBP1Q9NZI7 540 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 WDR81Q562E7 1941 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 MYADML2A6NDP7 307 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 F8W810 466 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 UPP2O95045 317 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 CSPG5O95196 566 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 GCAP28676 217 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 ELK3P41970 407 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 RBP5P82980 135 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 PIGHQ14442 188 aaPredicted RBP14.11□□□□□ -0.15
TTC39B-201ENST00000297615 TRABD2AQ86V40 505 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 BBOF1Q8ND07 529 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 UBN1Q9NPG3 1134 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 NMRK2Q9NPI5 230 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 SLC17A7Q9P2U7 560 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 HESX1Q9UBX0 185 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 MARCOQ9UEW3 520 aaPredicted RBP14.11□□□□□ -0.15
TTC39B-201ENST00000297615 SLC12A4Q9UP95 1085 aa14.11□□□□□ -0.15
TTC39B-201ENST00000297615 B4GALT4O60513 344 aa14.1□□□□□ -0.15
TTC39B-201ENST00000297615 DIAPH2O60879 1101 aa14.1□□□□□ -0.15
TTC39B-201ENST00000297615 GABBR2O75899 941 aa14.1□□□□□ -0.15
TTC39B-201ENST00000297615 MMP3P08254 477 aa14.1□□□□□ -0.15
TTC39B-201ENST00000297615 SMIM10L2AP0DMW4 78 aa14.1□□□□□ -0.15
TTC39B-201ENST00000297615 SMIM10L2BP0DMW5 78 aa14.1□□□□□ -0.15
TTC39B-201ENST00000297615 MDH1BQ5I0G3 518 aa14.1□□□□□ -0.15
TTC39B-201ENST00000297615 SYDE1Q6ZW31 735 aaPredicted RBP14.1□□□□□ -0.15
TTC39B-201ENST00000297615 PRPF39Q86UA1 669 aaKnown RBP14.1□□□□□ -0.15
TTC39B-201ENST00000297615 CPT1BQ92523 772 aa14.1□□□□□ -0.15
TTC39B-201ENST00000297615 KCNK16Q96T55 309 aa14.1□□□□□ -0.15
TTC39B-201ENST00000297615 LGMNQ99538 433 aa14.1□□□□□ -0.15
TTC39B-201ENST00000297615 UNKQ9C0B0 810 aaKnown RBP14.1□□□□□ -0.15
TTC39B-201ENST00000297615 SLC5A4Q9NY91 659 aa14.1□□□□□ -0.15
TTC39B-201ENST00000297615 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.1□□□□□ -0.15
TTC39B-201ENST00000297615 IKBKGQ9Y6K9 419 aa14.1□□□□□ -0.15
TTC39B-201ENST00000297615 TRIP12Q14669 1992 aaPredicted RBP14.1□□□□□ -0.15
TTC39B-201ENST00000297615 SIGLEC16A6NMB1 481 aa14.1□□□□□ -0.15
TTC39B-201ENST00000297615 LGR5O75473 907 aa14.1□□□□□ -0.15
TTC39B-201ENST00000297615 SAT1P21673 171 aa14.1□□□□□ -0.15
TTC39B-201ENST00000297615 EIF4BP23588 611 aaKnown RBP14.1□□□□□ -0.15
TTC39B-201ENST00000297615 ZNF157P51786 506 aaPredicted RBP14.1□□□□□ -0.15
TTC39B-201ENST00000297615 BCAR1P56945 870 aa14.1□□□□□ -0.15
TTC39B-201ENST00000297615 SESN2P58004 480 aaPredicted RBP14.1□□□□□ -0.15
TTC39B-201ENST00000297615 SLC25A11Q02978 314 aaKnown RBP14.1□□□□□ -0.15
TTC39B-201ENST00000297615 SETDB1Q15047 1291 aa14.1□□□□□ -0.15
TTC39B-201ENST00000297615 SOWAHAQ2M3V2 549 aa14.1□□□□□ -0.15
TTC39B-201ENST00000297615 SLCO2A1Q92959 643 aa14.1□□□□□ -0.15
TTC39B-201ENST00000297615 MS4A4AQ96JQ5 239 aa14.1□□□□□ -0.15
TTC39B-201ENST00000297615 GBA2Q9HCG7 927 aaPredicted RBP14.1□□□□□ -0.15
TTC39B-201ENST00000297615 GOLGA8TH3BQL2 631 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 KCNK1O00180 336 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 MCF2LO15068 1137 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 PAPSS1O43252 624 aaPredicted RBP14.09□□□□□ -0.15
TTC39B-201ENST00000297615 MED7O43513 233 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 SKAP2O75563 359 aaPredicted RBP14.09□□□□□ -0.15
TTC39B-201ENST00000297615 DNAJC8O75937 253 aaPredicted RBP14.09□□□□□ -0.15
TTC39B-201ENST00000297615 GPX6P59796 221 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 LMNB2Q03252 620 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 TAF1CQ15572 869 aaPredicted RBP14.09□□□□□ -0.15
TTC39B-201ENST00000297615 DGKDQ16760 1214 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 TRIM68Q6AZZ1 485 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 TEX2Q8IWB9 1127 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 MAML1Q92585 1016 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 USP6NLQ92738 828 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 MAGEB18Q96M61 343 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 PAFAH2Q99487 392 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 ARHGAP39Q9C0H5 1083 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 KCNH4Q9UQ05 1017 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 MYO7AQ13402 2215 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 POMCP01189 267 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 GPD1P21695 349 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 SDC4P31431 198 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 MSH2P43246 934 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 CLNS1AP54105 237 aaKnown RBP14.09□□□□□ -0.15
TTC39B-201ENST00000297615 TRIM32Q13049 653 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 ZNF792Q3KQV3 632 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 CCDC14Q49A88 953 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 TNFAIP8L3Q5GJ75 292 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 GNASQ5JWF2 1037 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 TLK2Q86UE8 772 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 CCDC185Q8N715 623 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 LRRC37BQ96QE4 947 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 KCNG1Q9UIX4 513 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 BARX2Q9UMQ3 279 aaPredicted RBP14.09□□□□□ -0.15
TTC39B-201ENST00000297615 TRUB2O95900 331 aaKnown RBP14.09□□□□□ -0.15
TTC39B-201ENST00000297615 GNL1P36915 607 aaPredicted RBP14.09□□□□□ -0.15
TTC39B-201ENST00000297615 MAP3K7CLP57077 242 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 ZBTB16Q05516 673 aa14.09□□□□□ -0.15
TTC39B-201ENST00000297615 RNASEH2BQ5TBB1 312 aaKnown RBP14.09□□□□□ -0.15
TTC39B-201ENST00000297615 WSCD1Q658N2 575 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms