RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 OAZ2O95190 189 aa16.26■□□□□ 0.19
LSM6-201ENST00000296581 KRT10P13645 584 aa16.26■□□□□ 0.19
LSM6-201ENST00000296581 ECHS1P30084 290 aa16.26■□□□□ 0.19
LSM6-201ENST00000296581 GATMP50440 423 aa16.26■□□□□ 0.19
LSM6-201ENST00000296581 YWHAHQ04917 246 aaPredicted RBP16.26■□□□□ 0.19
LSM6-201ENST00000296581 ADCY2Q08462 1091 aa16.26■□□□□ 0.19
LSM6-201ENST00000296581 KCNT1Q5JUK3 1230 aa16.26■□□□□ 0.19
LSM6-201ENST00000296581 LRRTM3Q86VH5 581 aa16.26■□□□□ 0.19
LSM6-201ENST00000296581 FAM172AQ8WUF8 416 aa16.26■□□□□ 0.19
LSM6-201ENST00000296581 FAM114A2Q9NRY5 505 aa16.26■□□□□ 0.19
LSM6-201ENST00000296581 TMLHEQ9NVH6 421 aa16.26■□□□□ 0.19
LSM6-201ENST00000296581 PRG3Q9Y2Y8 225 aaPredicted RBP16.26■□□□□ 0.19
LSM6-201ENST00000296581 VWA8A3KMH1 1905 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 PATJQ8NI35 1801 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 DAB1O75553 588 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 ENDOD1O94919 500 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 TKTL1P51854 596 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 DRG2P55039 364 aaKnown RBP16.25■□□□□ 0.19
LSM6-201ENST00000296581 ATP11AP98196 1134 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 TSPY1Q01534 308 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 NNTQ13423 1086 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 PKN2Q16513 984 aaKnown RBP16.25■□□□□ 0.19
LSM6-201ENST00000296581 CDO1Q16878 200 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 CCDC105Q8IYK2 499 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 SIX6OS1Q8N1H7 587 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 TMEM209Q96SK2 561 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 KCNK16Q96T55 309 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 MRPL9Q9BYD2 267 aaKnown RBP16.25■□□□□ 0.19
LSM6-201ENST00000296581 NGRNQ9NPE2 291 aaKnown RBP16.25■□□□□ 0.19
LSM6-201ENST00000296581 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.25■□□□□ 0.19
LSM6-201ENST00000296581 NRP1O14786 923 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 SYN3O14994 580 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 DAPK3O43293 454 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 PRPSAP2O60256 369 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 MATKP42679 507 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 KCNJ1P48048 391 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 NDUFV1P49821 464 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 ARSEP51690 589 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 HDAC4P56524 1084 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 C1QTNF8P60827 252 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 DDX42Q86XP3 938 aaKnown RBP eCLIP16.25■□□□□ 0.19
LSM6-201ENST00000296581 TEKT4Q8WW24 435 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 ATG4AQ8WYN0 398 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 TBCBQ99426 244 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 CNGB3Q9NQW8 809 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 ATP11BQ9Y2G3 1177 aa16.25■□□□□ 0.19
LSM6-201ENST00000296581 TADA2AO75478 443 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 BOLA3Q53S33 107 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 KAZNQ674X7 775 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 DRICH1Q6PGQ1 229 aaPredicted RBP16.24■□□□□ 0.19
LSM6-201ENST00000296581 DEFB128Q7Z7B8 93 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 TMEM175Q9BSA9 504 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 VIPAS39Q9H9C1 493 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 ADAM21Q9UKJ8 722 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 ADAM28Q9UKQ2 775 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 ECEL1O95672 775 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 TFE3P19532 575 aaPredicted RBP16.24■□□□□ 0.19
LSM6-201ENST00000296581 RFC2P35250 354 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 CDR1P51861 262 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 DAOAP59103 153 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 YWHAZP63104 245 aaKnown RBP16.24■□□□□ 0.19
LSM6-201ENST00000296581 CNKSR3Q6P9H4 555 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 LEKR1Q6ZMV7 388 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 SYDE1Q6ZW31 735 aaPredicted RBP16.24■□□□□ 0.19
LSM6-201ENST00000296581 BBS12Q6ZW61 710 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 SND1Q7KZF4 910 aaKnown RBP eCLIP16.24■□□□□ 0.19
LSM6-201ENST00000296581 STRADAQ7RTN6 431 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 GPRIN1Q7Z2K8 1008 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 DEFB106AQ8N104 65 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 KCTD6Q8NC69 237 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 NDRG1Q92597 394 aaKnown RBP16.24■□□□□ 0.19
LSM6-201ENST00000296581 VWCEQ96DN2 955 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 SLC2A13Q96QE2 648 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 COLEC11Q9BWP8 271 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 RHOBTB2Q9BYZ6 727 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 ADAM33Q9BZ11 813 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 ULBP1Q9BZM6 244 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 C11orf49Q9H6J7 331 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 PNPLA8Q9NP80 782 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 MARCH5Q9NX47 278 aa16.24■□□□□ 0.19
LSM6-201ENST00000296581 COL4A4P53420 1690 aaPredicted RBP16.23■□□□□ 0.19
LSM6-201ENST00000296581 CCDC189A1A4V9 331 aa16.23■□□□□ 0.19
LSM6-201ENST00000296581 CD48P09326 243 aa16.23■□□□□ 0.19
LSM6-201ENST00000296581 CLTBP09497 229 aa16.23■□□□□ 0.19
LSM6-201ENST00000296581 BDNFP23560 247 aa16.23■□□□□ 0.19
LSM6-201ENST00000296581 SLC11A1P49279 550 aa16.23■□□□□ 0.19
LSM6-201ENST00000296581 SNX1Q13596 522 aa16.23■□□□□ 0.19
LSM6-201ENST00000296581 BNIPLQ7Z465 357 aa16.23■□□□□ 0.19
LSM6-201ENST00000296581 ATL2Q8NHH9 583 aa16.23■□□□□ 0.19
LSM6-201ENST00000296581 GRK7Q8WTQ7 553 aa16.23■□□□□ 0.19
LSM6-201ENST00000296581 HSPH1Q92598 858 aa16.23■□□□□ 0.19
LSM6-201ENST00000296581 NT5C3BQ969T7 300 aa16.23■□□□□ 0.19
LSM6-201ENST00000296581 ZCWPW1Q9H0M4 648 aa16.23■□□□□ 0.19
LSM6-201ENST00000296581 DPH5Q9H2P9 285 aa16.23■□□□□ 0.19
LSM6-201ENST00000296581 DMAP1Q9NPF5 467 aaPredicted RBP16.23■□□□□ 0.19
LSM6-201ENST00000296581 TMEM39AQ9NV64 488 aa16.23■□□□□ 0.19
LSM6-201ENST00000296581 LTBP2Q14767 1821 aa16.23■□□□□ 0.19
LSM6-201ENST00000296581 TBKBP1A7MCY6 615 aa16.22■□□□□ 0.19
LSM6-201ENST00000296581 MDM4O15151 490 aa16.22■□□□□ 0.19
LSM6-201ENST00000296581 CPP00450 1065 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms