RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 C3orf67Q6ZVT6 689 aa13.21□□□□□ -0.29
PTCD1-201ENST00000292478 C17orf80Q9BSJ5 609 aa13.21□□□□□ -0.29
PTCD1-201ENST00000292478 UBXN6Q9BZV1 441 aa13.21□□□□□ -0.29
PTCD1-201ENST00000292478 GANQ9H2C0 597 aa13.21□□□□□ -0.29
PTCD1-201ENST00000292478 GDF3Q9NR23 364 aa13.21□□□□□ -0.29
PTCD1-201ENST00000292478 RUVBL2Q9Y230 463 aaKnown RBP13.21□□□□□ -0.29
PTCD1-201ENST00000292478 RIPK2O43353 540 aa13.21□□□□□ -0.3
PTCD1-201ENST00000292478 DEAF1O75398 565 aaPredicted RBP13.21□□□□□ -0.3
PTCD1-201ENST00000292478 CRTAMO95727 393 aa13.21□□□□□ -0.3
PTCD1-201ENST00000292478 LRG1P02750 347 aa13.21□□□□□ -0.3
PTCD1-201ENST00000292478 VTNP04004 478 aa13.21□□□□□ -0.3
PTCD1-201ENST00000292478 BFSP2Q13515 415 aa13.21□□□□□ -0.3
PTCD1-201ENST00000292478 TATDN2Q93075 761 aa13.21□□□□□ -0.3
PTCD1-201ENST00000292478 TMEM121Q9BTD3 319 aa13.21□□□□□ -0.3
PTCD1-201ENST00000292478 TMEM134Q9H6X4 195 aa13.21□□□□□ -0.3
PTCD1-201ENST00000292478 A0A087X0B3 334 aa13.21□□□□□ -0.3
PTCD1-201ENST00000292478 PGK2P07205 417 aa13.21□□□□□ -0.3
PTCD1-201ENST00000292478 EIF4BP23588 611 aaKnown RBP13.21□□□□□ -0.3
PTCD1-201ENST00000292478 DNAJB2P25686 324 aa13.21□□□□□ -0.3
PTCD1-201ENST00000292478 MAPK1P28482 360 aa13.21□□□□□ -0.3
PTCD1-201ENST00000292478 NAB1Q13506 487 aa13.21□□□□□ -0.3
PTCD1-201ENST00000292478 CACHD1Q5VU97 1274 aa13.21□□□□□ -0.3
PTCD1-201ENST00000292478 TMCO5AQ8N6Q1 288 aa13.21□□□□□ -0.3
PTCD1-201ENST00000292478 CPB2Q96IY4 423 aa13.21□□□□□ -0.3
PTCD1-201ENST00000292478 SIKE1Q9BRV8 207 aa13.21□□□□□ -0.3
PTCD1-201ENST00000292478 HACD1B0YJ81 288 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 H3BRB1 525 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 CYP2F1P24903 491 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 WASHC5Q12768 1159 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 CYB5D1Q6P9G0 228 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 NT5DC3Q86UY8 548 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 THAP11Q96EK4 314 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 TUT1Q9H6E5 874 aaKnown RBP13.2□□□□□ -0.3
PTCD1-201ENST00000292478 SELENONQ9NZV5 590 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 FAM95CA0A1B0GW59 222 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 PTPN7P35236 360 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 RAP1GAPP47736 663 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 ALDH5A1P51649 535 aaPredicted RBP13.2□□□□□ -0.3
PTCD1-201ENST00000292478 OXCT1P55809 520 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 ARHGEF19Q8IW93 802 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 ACTL9Q8TC94 416 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 KCNMB3Q9NPA1 279 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 KANSL3Q9P2N6 904 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 SCAF8Q9UPN6 1271 aaKnown RBP13.2□□□□□ -0.3
PTCD1-201ENST00000292478 PRG3Q9Y2Y8 225 aaPredicted RBP13.2□□□□□ -0.3
PTCD1-201ENST00000292478 ZSCAN9O15535 394 aaPredicted RBP13.2□□□□□ -0.3
PTCD1-201ENST00000292478 UPP2O95045 317 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 ATP6V1E1P36543 226 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 AMHR2Q16671 573 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 ZNF662Q6ZS27 426 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 SLC22A9Q8IVM8 553 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 REPS2Q8NFH8 660 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 TLR10Q9BXR5 811 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 PDGFCQ9NRA1 345 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 SCN3BQ9NY72 215 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 WWOXQ9NZC7 414 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 PDP2Q9P2J9 529 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 RNF112Q9ULX5 631 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 TRIM66O15016 1216 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 CXCL8P10145 99 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 ADRM1Q16186 407 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 TMEM154Q6P9G4 183 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 SLC27A1Q6PCB7 646 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 ATXN2LQ8WWM7 1075 aaKnown RBP13.2□□□□□ -0.3
PTCD1-201ENST00000292478 ZNF333Q96JL9 665 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 EMILIN2Q9BXX0 1053 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 TAGLN3Q9UI15 199 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 TRHDEQ9UKU6 1024 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 RAD54BQ9Y620 910 aa13.2□□□□□ -0.3
PTCD1-201ENST00000292478 BTNL10A8MVZ5 291 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 DDX3XO00571 662 aaKnown RBP eCLIP13.19□□□□□ -0.31e-7■■■□□ 18.9
PTCD1-201ENST00000292478 SEC24DO94855 1032 aaPredicted RBP13.19□□□□□ -0.3
PTCD1-201ENST00000292478 KCNMA1Q12791 1236 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 SEL1L3Q68CR1 1132 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 TMEM169Q96HH4 297 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 ACOT9Q9Y305 439 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 KIF1AQ12756 1690 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 LOC100653049A0A140TA62 436 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 KRT34O76011 436 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 FKBP9O95302 570 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 TARSP26639 723 aaKnown RBP13.19□□□□□ -0.3
PTCD1-201ENST00000292478 SCTRP47872 440 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 NUDT2P50583 147 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 ORC1Q13415 861 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 DMC1Q14565 340 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 KPNB1Q14974 876 aaKnown RBP13.19□□□□□ -0.3
PTCD1-201ENST00000292478 GRIK4Q16099 956 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 ZNF280DQ6N043 979 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 FKBP9P1Q75LS8 142 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 LZTR1Q8N653 840 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 BLOC1S5Q8TDH9 187 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 DDX4Q9NQI0 724 aaKnown RBP13.19□□□□□ -0.3
PTCD1-201ENST00000292478 IARS2Q9NSE4 1012 aaKnown RBP13.19□□□□□ -0.3
PTCD1-201ENST00000292478 GIMAP4Q9NUV9 329 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 SIK3Q9Y2K2 1263 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 ADGRA2Q96PE1 1338 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 INSRRP14616 1297 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 TNFRSF8P28908 595 aa13.19□□□□□ -0.3
PTCD1-201ENST00000292478 HNRNPH1P31943 449 aaKnown RBP13.19□□□□□ -0.3
PTCD1-201ENST00000292478 TMEM132BQ14DG7 1078 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms