RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 TTC33Q6PID6 262 aaPredicted RBP12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 NPNTQ6UXI9 565 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 NETO2Q8NC67 525 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 HELQQ8TDG4 1101 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 SEPT8Q92599 483 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 RMI1Q9H9A7 625 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 LINC00854A0A1B0GVQ3 168 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 DYNC1LI2O43237 492 aaPredicted RBP12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 STAG3L1P0CL83 205 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 CHRNB2P17787 502 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 RAP1GDS1P52306 607 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 PLOD1Q02809 727 aaPredicted RBP12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 PTPN11Q06124 597 aaPredicted RBP12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 FAM131BQ86XD5 332 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 RIBC1Q8N443 379 aaPredicted RBP12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 FAM172AQ8WUF8 416 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 APOL2Q9BQE5 337 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 MYLK2Q9H1R3 596 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 LRRC19Q9H756 370 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 RXFP1Q9HBX9 757 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 CNGB3Q9NQW8 809 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 BFARQ9NZS9 450 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 RNF181Q9P0P0 153 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 APPL1Q9UKG1 709 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 LRP6O75581 1613 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 FSCN2O14926 492 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 OASLQ15646 514 aaKnown RBP12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 FASTKD1Q53R41 847 aaKnown RBP12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 DENND5BQ6ZUT9 1274 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 CLEC4FQ8N1N0 589 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 COPS5Q92905 334 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 E2F7Q96AV8 911 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 PAK5Q9P286 719 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 NUP188Q5SRE5 1749 aa12.99□□□□□ -0.33
SLC6A1-201ENST00000287766 O00370 1275 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 ATP4AP20648 1035 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 DSG3P32926 999 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 SULT1E1P49888 294 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 DRG2P55039 364 aaKnown RBP12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 C15orf59Q2T9L4 293 aaPredicted RBP12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 ZACNQ401N2 412 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 MPZL3Q6UWV2 235 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 NANOGNBQ7Z5D8 188 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 SLFN11Q7Z7L1 901 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 PLD3Q8IV08 490 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 ZFYVE19Q96K21 471 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 CATSPER2Q96P56 530 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 AVENQ9NQS1 362 aaPredicted RBP12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 MYH15Q9Y2K3 1946 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 A0A1W2PPM1 405 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 ZNF862O60290 1169 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 MMP13P45452 471 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 ARMC3Q5W041 872 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 TMC5Q6UXY8 1006 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 NIPA1Q7RTP0 329 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 SCUBE3Q8IX30 993 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 CMTM5Q96DZ9 223 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 MRIQ9BWK5 157 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 AP5M1Q9H0R1 490 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 DMAC2Q9NW81 257 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 V9GYQ6 96 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 CICQ96RK0 1608 aaPredicted RBP12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 HNRNPCL2B2RXH8 293 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 KBTBD13C9JR72 458 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 MIPP30301 263 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 ADSSP30520 456 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 EIF2B2P49770 351 aaKnown RBP12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 NOMO3P69849 1222 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 MMRN1Q13201 1228 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 FASTKD3Q14CZ7 662 aaKnown RBP12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 SCN4BQ8IWT1 228 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 SCUBE1Q8IWY4 988 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 ALKBH8Q96BT7 664 aaKnown RBP12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 PLIN4Q96Q06 1357 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 ADARP55265 1226 aaKnown RBP12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 CCDC103Q8IW40 242 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 CKAP2Q8WWK9 683 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 SCG3Q8WXD2 468 aaKnown RBP12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 PBXIP1Q96AQ6 731 aa12.98□□□□□ -0.33
SLC6A1-201ENST00000287766 NUP98P52948 1817 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 GHRP10912 638 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 TAC1P20366 129 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 PMLP29590 882 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 CLK1P49759 484 aaKnown RBP12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 GPR162Q16538 588 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 EFHC2Q5JST6 749 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 ZCCHC23Q6ZST2 131 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 ZNF572Q7Z3I7 529 aaPredicted RBP12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 WDR49Q8IV35 697 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 CHST13Q8NET6 341 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 SPATA17Q96L03 361 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 MBOAT7Q96N66 472 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 CYLDQ9NQC7 956 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 DPP3Q9NY33 737 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 GRHL1Q9NZI5 618 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 WBP4O75554 376 aaKnown RBP12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 SERPINI2O75830 405 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 CST3P01034 146 aaPredicted RBP12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 FAAP100Q0VG06 881 aa12.97□□□□□ -0.33
SLC6A1-201ENST00000287766 GCOM2Q9BZD3 368 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms