RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 TMEM240Q5SV17 173 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 PPP1R15BQ5SWA1 713 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 C9orf50Q5SZB4 431 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 MIB1Q86YT6 1006 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 CCDC105Q8IYK2 499 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 DCP1BQ8IZD4 617 aaKnown RBP10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 PEBP4Q96S96 227 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 VN1R3Q9BXE9 311 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 DDIT4Q9NX09 232 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 CALCOCO1Q9P1Z2 691 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 TMEM59LQ9UK28 342 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 R3HDM2Q9Y2K5 976 aaKnown RBP10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 TTI1O43156 1089 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 MSI1O43347 362 aaKnown RBP10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 ATP2A2P16615 1042 aaKnown RBP10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 KRT81Q14533 505 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 SYCP2LQ5T4T6 812 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 BSPRYQ5W0U4 402 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 FAM171BQ6P995 826 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 C4orf50Q6ZRC1 276 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 FIBCD1Q8N539 461 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 CD101Q93033 1021 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 HSFY1Q96LI6 401 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 TRIM51Q9BSJ1 452 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 EPB41L5Q9HCM4 733 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 CHST7Q9NS84 486 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 PCDHB5Q9Y5E4 795 aa10.26□□□□□ -0.77
PPP4R1-201ENST00000285124 CHD9Q3L8U1 2897 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 RAD51CO43502 376 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 IFNB1P01574 187 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 CYP11A1P05108 521 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 PRLRP16471 622 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 PLA2G4AP47712 749 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 GABRB2P47870 512 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 ZNF143P52747 638 aaPredicted RBP10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 VSNL1P62760 191 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 MTM1Q13496 603 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 C1orf228Q6PIY5 440 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 RBM23Q86U06 439 aaKnown RBP10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 RFX6Q8HWS3 928 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 KLHL23Q8NBE8 558 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 CNPY3Q9BT09 278 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 OSBPL8Q9BZF1 889 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.25□□□□□ -0.775e-13■■□□□ 11.6
PPP4R1-201ENST00000285124 HEY1Q9Y5J3 304 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 NR2E3Q9Y5X4 410 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 WDR27A2RRH5 827 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 F5H423 210 aaPredicted RBP10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 CTIFO43310 598 aaKnown RBP10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 MTA2O94776 668 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 OAZ2O95190 189 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 GJB5O95377 273 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 GLI1P08151 1106 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 TYMPP19971 482 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 SLC1A1P43005 524 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 ACADSBP45954 432 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 NRLP54845 237 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 SNX16P57768 344 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 PPIGQ13427 754 aaKnown RBP eCLIP10.25□□□□□ -0.779e-9■■□□□ 11.6
PPP4R1-201ENST00000285124 HLTFQ14527 1009 aaKnown RBP eCLIP10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 FBXO38Q6PIJ6 1188 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 NPNTQ6UXI9 565 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 ZC3H18Q86VM9 953 aaKnown RBP10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 SLC13A5Q86YT5 568 aaPredicted RBP10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 CCDC185Q8N715 623 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 MAK16Q9BXY0 300 aaKnown RBP10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 CARD9Q9H257 536 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 ANKZF1Q9H8Y5 726 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 PRDM10Q9NQV6 1147 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 SPG21Q9NZD8 308 aa10.25□□□□□ -0.77
PPP4R1-201ENST00000285124 ARHGEF37A1IGU5 675 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 HEXIM1O94992 359 aaKnown RBP10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 LTFP02788 710 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 SRGAP2BP0DMP2 458 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 HADHBP55084 474 aaKnown RBP10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 HDAC4P56524 1084 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 ROR1Q01973 937 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 DEUP1Q05D60 604 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 BTBD8Q5XKL5 378 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 GSTA5Q7RTV2 222 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 ST13P5Q8NFI4 369 aaPredicted RBP10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 FAM204AQ9H8W3 233 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 PCDHB12Q9Y5F1 795 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 A0A1W2PQH9 124 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 MTMR11A4FU01 709 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 PRRG1O14668 218 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 PER2O15055 1255 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 CST8O60676 142 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 FGF18O76093 207 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 CTNNB1P35222 781 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 DAOAP59103 153 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 TUBB2AQ13885 445 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 MAPRE1Q15691 268 aaKnown RBP10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 EFHC1Q5JVL4 640 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 PLPP4Q5VZY2 271 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 CCDC70Q6NSX1 233 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 PPP1R2P3Q6NXS1 205 aa10.24□□□□□ -0.77
PPP4R1-201ENST00000285124 ANKS3Q6ZW76 656 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms