RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 PCK1P35558 622 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 ITGA8P53708 1063 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 BCAT1P54687 386 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 PAN2Q504Q3 1202 aaKnown RBP21.92■■□□□ 1.1
YBX3-202ENST00000279550 SPDYCQ5MJ68 293 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 DRICH1Q6PGQ1 229 aaPredicted RBP21.92■■□□□ 1.1
YBX3-202ENST00000279550 DCLRE1AQ6PJP8 1040 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 CMASQ8NFW8 434 aaPredicted RBP21.92■■□□□ 1.1
YBX3-202ENST00000279550 FEZ2Q9UHY8 353 aaPredicted RBP21.92■■□□□ 1.1
YBX3-202ENST00000279550 ALPK3Q96L96 1907 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 LTBP2Q14767 1821 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 EFCAB14O75071 495 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 UPP2O95045 317 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 ITIH2P19823 946 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 PAX3P23760 479 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 CHKAP35790 457 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 DYNLT1P63172 113 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 CALCOCO2Q13137 446 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 BYSLQ13895 437 aaKnown RBP21.92■■□□□ 1.1
YBX3-202ENST00000279550 CDO1Q16878 200 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 TIGD5Q53EQ6 642 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 KIAA0319Q5VV43 1072 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 CD300LGQ6UXG3 332 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 DSTYKQ6XUX3 929 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 HASPINQ8TF76 798 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 MRPL9Q9BYD2 267 aaKnown RBP21.92■■□□□ 1.1
YBX3-202ENST00000279550 FAM129AQ9BZQ8 928 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 SEMA4AQ9H3S1 761 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 IL23AQ9NPF7 189 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 DNAJB4Q9UDY4 337 aa21.92■■□□□ 1.1
YBX3-202ENST00000279550 TBKBP1A7MCY6 615 aa21.91■■□□□ 1.1
YBX3-202ENST00000279550 SHBGP04278 402 aa21.91■■□□□ 1.1
YBX3-202ENST00000279550 FAM163BP0C2L3 166 aa21.91■■□□□ 1.1
YBX3-202ENST00000279550 ADCY8P40145 1251 aa21.91■■□□□ 1.1
YBX3-202ENST00000279550 RPL34P49207 117 aaKnown RBP21.91■■□□□ 1.1
YBX3-202ENST00000279550 CDR1P51861 262 aa21.91■■□□□ 1.1
YBX3-202ENST00000279550 VCPP55072 806 aaKnown RBP21.91■■□□□ 1.1
YBX3-202ENST00000279550 ATP11AP98196 1134 aa21.91■■□□□ 1.1
YBX3-202ENST00000279550 OASLQ15646 514 aaKnown RBP21.91■■□□□ 1.1
YBX3-202ENST00000279550 BBS12Q6ZW61 710 aa21.91■■□□□ 1.1
YBX3-202ENST00000279550 ZNF365Q70YC5 407 aa21.91■■□□□ 1.1
YBX3-202ENST00000279550 C7orf61Q8IZ16 206 aa21.91■■□□□ 1.1
YBX3-202ENST00000279550 KCTD6Q8NC69 237 aa21.91■■□□□ 1.1
YBX3-202ENST00000279550 B3GALNT2Q8NCR0 500 aa21.91■■□□□ 1.1
YBX3-202ENST00000279550 TOP1MTQ969P6 601 aa21.91■■□□□ 1.1
YBX3-202ENST00000279550 ATP6V1G3Q96LB4 118 aa21.91■■□□□ 1.1
YBX3-202ENST00000279550 PABPC3Q9H361 631 aaKnown RBP21.91■■□□□ 1.1
YBX3-202ENST00000279550 SAE1Q9UBE0 346 aaPredicted RBP21.91■■□□□ 1.1
YBX3-202ENST00000279550 F8W810 466 aa21.9■■□□□ 1.1
YBX3-202ENST00000279550 CLDN5O00501 218 aa21.9■■□□□ 1.1
YBX3-202ENST00000279550 ITGB1P05556 798 aa21.9■■□□□ 1.1
YBX3-202ENST00000279550 ZSCAN5DPP0CG00 497 aa21.9■■□□□ 1.1
YBX3-202ENST00000279550 LCP1P13796 627 aa21.9■■□□□ 1.1
YBX3-202ENST00000279550 ETS1P14921 441 aa21.9■■□□□ 1.1
YBX3-202ENST00000279550 TFE3P19532 575 aaPredicted RBP21.9■■□□□ 1.1
YBX3-202ENST00000279550 OR1G1P47890 313 aa21.9■■□□□ 1.1
YBX3-202ENST00000279550 ARSEP51690 589 aa21.9■■□□□ 1.1
YBX3-202ENST00000279550 CCDC25Q86WR0 208 aa21.9■■□□□ 1.1
YBX3-202ENST00000279550 FUKQ8N0W3 1084 aa21.9■■□□□ 1.1
YBX3-202ENST00000279550 ALLCQ8N6M5 410 aa21.9■■□□□ 1.1
YBX3-202ENST00000279550 SLC35B2Q8TB61 432 aa21.9■■□□□ 1.1
YBX3-202ENST00000279550 NKD2Q969F2 451 aaPredicted RBP21.9■■□□□ 1.1
YBX3-202ENST00000279550 NRDE2Q9H7Z3 1164 aa21.9■■□□□ 1.1
YBX3-202ENST00000279550 GPATCH2LQ9NWQ4 482 aa21.9■■□□□ 1.1
YBX3-202ENST00000279550 ZNF148Q9UQR1 794 aa21.9■■□□□ 1.1
YBX3-202ENST00000279550 EFR3BQ9Y2G0 817 aa21.9■■□□□ 1.1
YBX3-202ENST00000279550 TMEM189-UBE2V1I3L0A0 370 aa21.89■■□□□ 1.1
YBX3-202ENST00000279550 GABRDO14764 452 aa21.89■■□□□ 1.1
YBX3-202ENST00000279550 CST8O60676 142 aa21.89■■□□□ 1.1
YBX3-202ENST00000279550 DGKIO75912 1065 aa21.89■■□□□ 1.1
YBX3-202ENST00000279550 BAIAP3O94812 1187 aa21.89■■□□□ 1.1
YBX3-202ENST00000279550 AMHP03971 560 aa21.89■■□□□ 1.1
YBX3-202ENST00000279550 BRCC3P46736 316 aa21.89■■□□□ 1.1
YBX3-202ENST00000279550 WDR5P61964 334 aaKnown RBP21.89■■□□□ 1.1
YBX3-202ENST00000279550 MMRN1Q13201 1228 aa21.89■■□□□ 1.1
YBX3-202ENST00000279550 DNAJC21Q5F1R6 531 aaKnown RBP21.89■■□□□ 1.1
YBX3-202ENST00000279550 PAQR9Q6ZVX9 377 aa21.89■■□□□ 1.1
YBX3-202ENST00000279550 GSTA5Q7RTV2 222 aa21.89■■□□□ 1.1
YBX3-202ENST00000279550 TMEM86AQ8N2M4 240 aa21.89■■□□□ 1.1
YBX3-202ENST00000279550 BADQ92934 168 aa21.89■■□□□ 1.1
YBX3-202ENST00000279550 TNIP3Q96KP6 325 aa21.89■■□□□ 1.1
YBX3-202ENST00000279550 PWWP2AQ96N64 755 aa21.89■■□□□ 1.1
YBX3-202ENST00000279550 ADAM33Q9BZ11 813 aa21.89■■□□□ 1.1
YBX3-202ENST00000279550 ANAPC5Q9UJX4 755 aa21.89■■□□□ 1.1
YBX3-202ENST00000279550 DRG1Q9Y295 367 aaKnown RBP21.89■■□□□ 1.1
YBX3-202ENST00000279550 I3L4J1 428 aa21.89■■□□□ 1.09
YBX3-202ENST00000279550 ODC1P11926 461 aa21.89■■□□□ 1.09
YBX3-202ENST00000279550 PTPN1P18031 435 aaKnown RBP21.89■■□□□ 1.09
YBX3-202ENST00000279550 DEFB103AP81534 67 aa21.89■■□□□ 1.09
YBX3-202ENST00000279550 OTUD4Q01804 1114 aaKnown RBP21.89■■□□□ 1.09
YBX3-202ENST00000279550 PPIGQ13427 754 aaKnown RBP eCLIP21.89■■□□□ 1.093e-7■■□□□ 13.1
YBX3-202ENST00000279550 IZUMO3Q5VZ72 239 aa21.89■■□□□ 1.09
YBX3-202ENST00000279550 RFX6Q8HWS3 928 aa21.89■■□□□ 1.09
YBX3-202ENST00000279550 LRRC43Q8N309 656 aa21.89■■□□□ 1.09
YBX3-202ENST00000279550 ACTL9Q8TC94 416 aa21.89■■□□□ 1.09
YBX3-202ENST00000279550 FAM172AQ8WUF8 416 aa21.89■■□□□ 1.09
YBX3-202ENST00000279550 HNRNPABQ99729 332 aaKnown RBP21.89■■□□□ 1.09
YBX3-202ENST00000279550 C10orf88Q9H8K7 445 aa21.89■■□□□ 1.09
YBX3-202ENST00000279550 NGRNQ9NPE2 291 aaKnown RBP21.89■■□□□ 1.09
YBX3-202ENST00000279550 HCSTQ9UBK5 93 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms