RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 CKAP4Q07065 602 aaKnown RBP13.93□□□□□ -0.18
ACER3-201ENST00000278544 MTM1Q13496 603 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 RSRC2Q7L4I2 434 aaKnown RBP13.93□□□□□ -0.18
ACER3-201ENST00000278544 TMC7Q7Z402 723 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 SIK2Q9H0K1 926 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 TMEM59LQ9UK28 342 aa13.93□□□□□ -0.18
ACER3-201ENST00000278544 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.93□□□□□ -0.18
ACER3-201ENST00000278544 WDR27A2RRH5 827 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 PRPSAP2O60256 369 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 ZBED1O96006 694 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 ATP2A2P16615 1042 aaKnown RBP13.92□□□□□ -0.18
ACER3-201ENST00000278544 C8orf74Q6P047 294 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 MIB1Q86YT6 1006 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.92□□□□□ -0.18
ACER3-201ENST00000278544 CCDC185Q8N715 623 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 DNAI2Q9GZS0 605 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 CHST7Q9NS84 486 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 VWA8A3KMH1 1905 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 CCDC66A2RUB6 948 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 F5H423 210 aaPredicted RBP13.92□□□□□ -0.18
ACER3-201ENST00000278544 TTI1O43156 1089 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 CREB3O43889 395 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 GJB5O95377 273 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 CYP11A1P05108 521 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 PLA2G4AP47712 749 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 ROR1Q01973 937 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 GUCY2DQ02846 1103 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 FAM171BQ6P995 826 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 RBM23Q86U06 439 aaKnown RBP13.92□□□□□ -0.18
ACER3-201ENST00000278544 KLHL23Q8NBE8 558 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 MAGOHBQ96A72 148 aaKnown RBP13.92□□□□□ -0.18
ACER3-201ENST00000278544 FAXDC2Q96IV6 333 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 CCDC114Q96M63 670 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 DDIT4Q9NX09 232 aa13.92□□□□□ -0.18
ACER3-201ENST00000278544 RAD51CO43502 376 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 MTA2O94776 668 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 USP41Q3LFD5 358 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 NPNTQ6UXI9 565 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 C17orf80Q9BSJ5 609 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 ANKZF1Q9H8Y5 726 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 WDR35Q9P2L0 1181 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 SART1O43290 800 aaKnown RBP13.91□□□□□ -0.18
ACER3-201ENST00000278544 GABRB2P47870 512 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 ZNF143P52747 638 aaPredicted RBP13.91□□□□□ -0.18
ACER3-201ENST00000278544 HDAC4P56524 1084 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 VSNL1P62760 191 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 PIGHQ14442 188 aaPredicted RBP13.91□□□□□ -0.18
ACER3-201ENST00000278544 BSPRYQ5W0U4 402 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 FBXO38Q6PIJ6 1188 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 C4orf50Q6ZRC1 276 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 FIBCD1Q8N539 461 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 PBKQ96KB5 322 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.91□□□□□ -0.18
ACER3-201ENST00000278544 MIF4GDA9UHW6 222 aaKnown RBP13.91□□□□□ -0.18
ACER3-201ENST00000278544 PARNO95453 639 aaKnown RBP13.91□□□□□ -0.18
ACER3-201ENST00000278544 KRT81Q14533 505 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 PLPP4Q5VZY2 271 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 C1orf228Q6PIY5 440 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 CNPY3Q9BT09 278 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 NMUR1Q9HB89 426 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 PRDM10Q9NQV6 1147 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 ASNSD1Q9NWL6 643 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 MFHAS1Q9Y4C4 1052 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 PCDHB5Q9Y5E4 795 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 HEY1Q9Y5J3 304 aa13.91□□□□□ -0.18
ACER3-201ENST00000278544 MTMR11A4FU01 709 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 OAZ2O95190 189 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 GLI1P08151 1106 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 TYMPP19971 482 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 CTNNA2P26232 953 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 CTNNB1P35222 781 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 DAOAP59103 153 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 PPIGQ13427 754 aaKnown RBP eCLIP13.9□□□□□ -0.18
ACER3-201ENST00000278544 SLC13A5Q86YT5 568 aaPredicted RBP13.9□□□□□ -0.18
ACER3-201ENST00000278544 CCDC105Q8IYK2 499 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 DCP1BQ8IZD4 617 aaKnown RBP13.9□□□□□ -0.18
ACER3-201ENST00000278544 COLGALT1Q8NBJ5 622 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 OSBPL8Q9BZF1 889 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 FAM204AQ9H8W3 233 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.9□□□□□ -0.182e-7■□□□□ 8.7
ACER3-201ENST00000278544 A0A1W2PQH9 124 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 CTIFO43310 598 aaKnown RBP13.9□□□□□ -0.18
ACER3-201ENST00000278544 FGF18O76093 207 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 FYNP06241 537 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 MYBL2P10244 700 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 TAF12Q16514 161 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 ZNF697Q5TEC3 545 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 UBE2Q1Q7Z7E8 422 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 RFX6Q8HWS3 928 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 HSFY1Q96LI6 401 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 CLSTN3Q9BQT9 956 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 CARD9Q9H257 536 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 EPB41L5Q9HCM4 733 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 PIGVQ9NUD9 493 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 HHLA1C9JL84 531 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 PER2O15055 1255 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 HEXIM1O94992 359 aaKnown RBP13.9□□□□□ -0.18
ACER3-201ENST00000278544 IFNB1P01574 187 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 LTFP02788 710 aa13.9□□□□□ -0.18
ACER3-201ENST00000278544 FGFR3P22607 806 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms