RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 FAM210AQ96ND0 272 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 OSBPL8Q9BZF1 889 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 SLCO1B3Q9NPD5 702 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 TBK1Q9UHD2 729 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 K7ENM7 598 aa10.78□□□□□ -0.68
UPF3B-201ENST00000276201 ENTPD5O75356 428 aa10.78□□□□□ -0.68
UPF3B-201ENST00000276201 CBX6O95503 412 aa10.78□□□□□ -0.68
UPF3B-201ENST00000276201 OATP04181 439 aa10.78□□□□□ -0.68
UPF3B-201ENST00000276201 CYP1A1P04798 512 aaPredicted RBP10.78□□□□□ -0.68
UPF3B-201ENST00000276201 PLS3P13797 630 aa10.78□□□□□ -0.68
UPF3B-201ENST00000276201 RFC2P35250 354 aa10.78□□□□□ -0.68
UPF3B-201ENST00000276201 CCDC6Q16204 474 aa10.78□□□□□ -0.68
UPF3B-201ENST00000276201 LRRC38Q5VT99 294 aa10.78□□□□□ -0.68
UPF3B-201ENST00000276201 PSRC1Q6PGN9 363 aaPredicted RBP10.78□□□□□ -0.68
UPF3B-201ENST00000276201 TRMT1LQ7Z2T5 733 aaKnown RBP10.78□□□□□ -0.68
UPF3B-201ENST00000276201 DEFB128Q7Z7B8 93 aa10.78□□□□□ -0.68
UPF3B-201ENST00000276201 ADGRG6Q86SQ4 1221 aa10.78□□□□□ -0.68
UPF3B-201ENST00000276201 PTPRN2Q92932 1015 aa10.78□□□□□ -0.68
UPF3B-201ENST00000276201 FAM167AQ96KS9 214 aa10.78□□□□□ -0.68
UPF3B-201ENST00000276201 FRMD8P1Q9BZ68 369 aaPredicted RBP10.78□□□□□ -0.68
UPF3B-201ENST00000276201 SAYSD1Q9NPB0 183 aa10.78□□□□□ -0.68
UPF3B-201ENST00000276201 DLGAP2Q9P1A6 1054 aa10.78□□□□□ -0.68
UPF3B-201ENST00000276201 ANGPTL2Q9UKU9 493 aa10.78□□□□□ -0.68
UPF3B-201ENST00000276201 COL1A2P08123 1366 aa10.78□□□□□ -0.68
UPF3B-201ENST00000276201 KLF11O14901 512 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 LIASO43766 372 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 SPAG7O75391 227 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 STBD1O95210 358 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 DHRS4L1P0CG22 281 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 RALAP11233 206 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 CA4P22748 312 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 NCKAP1LP55160 1127 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 CDK16Q00536 496 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 ZNF484Q5JVG2 852 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 TAF2Q6P1X5 1199 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 ADGRD1Q6QNK2 874 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 PCGF5Q86SE9 256 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 USP37Q86T82 979 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 RCOR2Q8IZ40 523 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 ALLCQ8N6M5 410 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 TET1Q8NFU7 2136 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.77□□□□□ -0.68
UPF3B-201ENST00000276201 MZB1Q8WU39 189 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 SCG3Q8WXD2 468 aaKnown RBP10.77□□□□□ -0.68
UPF3B-201ENST00000276201 MFSD14AQ96MC6 490 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 FBXL18Q96ME1 805 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 GORASP1Q9BQQ3 440 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 TRIM55Q9BYV6 548 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 TRIM4Q9C037 500 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 C17orf75Q9HAS0 396 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 DMAP1Q9NPF5 467 aaPredicted RBP10.77□□□□□ -0.68
UPF3B-201ENST00000276201 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.77□□□□□ -0.68
UPF3B-201ENST00000276201 EXOC7Q9UPT5 735 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 TBC1D30Q9Y2I9 924 aa10.77□□□□□ -0.68
UPF3B-201ENST00000276201 SOX1O00570 391 aaPredicted RBP10.77□□□□□ -0.69
UPF3B-201ENST00000276201 NBNO60934 754 aa10.77□□□□□ -0.69
UPF3B-201ENST00000276201 CSDE1O75534 798 aaKnown RBP10.77□□□□□ -0.69
UPF3B-201ENST00000276201 PDHA1P08559 390 aa10.77□□□□□ -0.69
UPF3B-201ENST00000276201 CTSHP09668 335 aa10.77□□□□□ -0.69
UPF3B-201ENST00000276201 RFC5P40937 340 aa10.77□□□□□ -0.69
UPF3B-201ENST00000276201 CLCN2P51788 898 aa10.77□□□□□ -0.69
UPF3B-201ENST00000276201 GEMIN4P57678 1058 aaKnown RBP10.77□□□□□ -0.69
UPF3B-201ENST00000276201 CUL3Q13618 768 aa10.77□□□□□ -0.69
UPF3B-201ENST00000276201 RCN1Q15293 331 aa10.77□□□□□ -0.69
UPF3B-201ENST00000276201 KLHL38Q2WGJ6 581 aa10.77□□□□□ -0.69
UPF3B-201ENST00000276201 P3H1Q32P28 736 aa10.77□□□□□ -0.69
UPF3B-201ENST00000276201 ACSBG2Q5FVE4 666 aa10.77□□□□□ -0.69
UPF3B-201ENST00000276201 PPP1R15BQ5SWA1 713 aa10.77□□□□□ -0.69
UPF3B-201ENST00000276201 RNASEH2BQ5TBB1 312 aaKnown RBP10.77□□□□□ -0.69
UPF3B-201ENST00000276201 ZNF449Q6P9G9 518 aa10.77□□□□□ -0.69
UPF3B-201ENST00000276201 LVRNQ6Q4G3 990 aa10.77□□□□□ -0.69
UPF3B-201ENST00000276201 CENPUQ71F23 418 aa10.77□□□□□ -0.69
UPF3B-201ENST00000276201 MON1BQ7L1V2 547 aa10.77□□□□□ -0.69
UPF3B-201ENST00000276201 MTDHQ86UE4 582 aaKnown RBP10.77□□□□□ -0.69
UPF3B-201ENST00000276201 NRG4Q8WWG1 115 aa10.77□□□□□ -0.69
UPF3B-201ENST00000276201 SPOCK2Q92563 424 aa10.77□□□□□ -0.69
UPF3B-201ENST00000276201 SEMA4DQ92854 862 aa10.77□□□□□ -0.69
UPF3B-201ENST00000276201 NKD2Q969F2 451 aaPredicted RBP10.77□□□□□ -0.69
UPF3B-201ENST00000276201 RBM41Q96IZ5 413 aaKnown RBP10.77□□□□□ -0.69
UPF3B-201ENST00000276201 GPAMQ9HCL2 828 aa10.77□□□□□ -0.69
UPF3B-201ENST00000276201 MRPL47Q9HD33 250 aaKnown RBP10.77□□□□□ -0.69
UPF3B-201ENST00000276201 WRAP73Q9P2S5 460 aaPredicted RBP10.77□□□□□ -0.69
UPF3B-201ENST00000276201 TMEM150BA6NC51 233 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 MAP3K7O43318 606 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 AP1G2O75843 785 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 RNF8O76064 485 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 C22orf31O95567 290 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 CXCL10P02778 98 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 PFKMP08237 780 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 KRT15P19012 456 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 PHBP35232 272 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 PSMC5P62195 406 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 RCN2Q14257 317 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 TRIP13Q15645 432 aaPredicted RBP10.76□□□□□ -0.69
UPF3B-201ENST00000276201 LRIT3Q3SXY7 679 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 FAM26DQ5JW98 314 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 LIN9Q5TKA1 542 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 RASIP1Q5U651 963 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 PADI6Q6TGC4 694 aa10.76□□□□□ -0.69
UPF3B-201ENST00000276201 NET1Q7Z628 596 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms