RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 MRPS5P82675 430 aaKnown RBP21.5■■□□□ 1.03
LYSMD2-201ENST00000267838 TLE2Q04725 743 aa21.5■■□□□ 1.03
LYSMD2-201ENST00000267838 TAZQ16635 292 aa21.5■■□□□ 1.03
LYSMD2-201ENST00000267838 CFAP58Q5T655 872 aa21.5■■□□□ 1.03
LYSMD2-201ENST00000267838 ZMIZ2Q8NF64 920 aa21.5■■□□□ 1.03
LYSMD2-201ENST00000267838 OR10T2Q8NGX3 314 aa21.5■■□□□ 1.03
LYSMD2-201ENST00000267838 PKMYT1Q99640 499 aa21.5■■□□□ 1.03
LYSMD2-201ENST00000267838 C11orf84Q9BUA3 381 aaPredicted RBP21.5■■□□□ 1.03
LYSMD2-201ENST00000267838 DDX23Q9BUQ8 820 aaKnown RBP21.5■■□□□ 1.03
LYSMD2-201ENST00000267838 PPP1R12CQ9BZL4 782 aa21.5■■□□□ 1.03
LYSMD2-201ENST00000267838 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.5■■□□□ 1.03
LYSMD2-201ENST00000267838 TET1Q8NFU7 2136 aa21.5■■□□□ 1.03
LYSMD2-201ENST00000267838 IRAK1P51617 712 aa21.49■■□□□ 1.03
LYSMD2-201ENST00000267838 TKTL1P51854 596 aa21.49■■□□□ 1.03
LYSMD2-201ENST00000267838 CACNA2D1P54289 1103 aa21.49■■□□□ 1.03
LYSMD2-201ENST00000267838 PPP1R7Q15435 360 aa21.49■■□□□ 1.03
LYSMD2-201ENST00000267838 SCYL2Q6P3W7 929 aa21.49■■□□□ 1.03
LYSMD2-201ENST00000267838 FOXR1Q6PIV2 292 aa21.49■■□□□ 1.03
LYSMD2-201ENST00000267838 ATL2Q8NHH9 583 aa21.49■■□□□ 1.03
LYSMD2-201ENST00000267838 NDRG1Q92597 394 aaKnown RBP21.49■■□□□ 1.03
LYSMD2-201ENST00000267838 ZNF333Q96JL9 665 aa21.49■■□□□ 1.03
LYSMD2-201ENST00000267838 CASD1Q96PB1 797 aa21.49■■□□□ 1.03
LYSMD2-201ENST00000267838 KCNK16Q96T55 309 aa21.49■■□□□ 1.03
LYSMD2-201ENST00000267838 FAM118BQ9BPY3 351 aa21.49■■□□□ 1.03
LYSMD2-201ENST00000267838 TMEM30AQ9NV96 361 aa21.49■■□□□ 1.03
LYSMD2-201ENST00000267838 PRG3Q9Y2Y8 225 aaPredicted RBP21.49■■□□□ 1.03
LYSMD2-201ENST00000267838 SNX24Q9Y343 169 aa21.49■■□□□ 1.03
LYSMD2-201ENST00000267838 CD48P09326 243 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 NDUFV1P49821 464 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 TSPY1Q01534 308 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 KRT17Q04695 432 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 YWHAHQ04917 246 aaPredicted RBP21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 BOLA3Q53S33 107 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 SYDE1Q6ZW31 735 aaPredicted RBP21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 C10orf67Q8IYJ2 551 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 CENPIQ92674 756 aaPredicted RBP21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 TMEM209Q96SK2 561 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 EIF3HO15372 352 aaKnown RBP eCLIP21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 DAB1O75553 588 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 FBXO21O94952 628 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 TFE3P19532 575 aaPredicted RBP21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 MATKP42679 507 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 MAGEA9P43362 315 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 GATMP50440 423 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 RABGGTBP53611 331 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 HDAC4P56524 1084 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 MAPRE1Q15691 268 aaKnown RBP21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 RAB41Q5JT25 222 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 C1orf53Q5VUE5 145 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 TEKT4Q8WW24 435 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 FAM149B1Q96BN6 582 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 CCDC114Q96M63 670 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 ZIM3Q96PE6 472 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 RHOBTB2Q9BYZ6 727 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 NRDE2Q9H7Z3 1164 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 CSNK1G1Q9HCP0 422 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 TMLHEQ9NVH6 421 aa21.48■■□□□ 1.03
LYSMD2-201ENST00000267838 HHLA1C9JL84 531 aa21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 HOXA2O43364 376 aa21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 TRAPPC3O43617 180 aa21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 LIASO43766 372 aa21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 ENDOD1O94919 500 aa21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 GAS8O95995 478 aa21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 GBP1P32455 592 aa21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 CYP2C18P33260 490 aa21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 RPL21P46778 160 aaKnown RBP21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 CDH6P55285 790 aa21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 CORO7P57737 925 aa21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 YWHAZP63104 245 aaKnown RBP21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 DRICH1Q6PGQ1 229 aaPredicted RBP21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 CTU1Q7Z7A3 348 aaKnown RBP21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 LRRTM3Q86VH5 581 aa21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 DEFB106AQ8N104 65 aa21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 CRIPAKQ8N1N5 446 aa21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 DIS3LQ8TF46 1054 aaKnown RBP21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 TBCBQ99426 244 aa21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 ULBP1Q9BZM6 244 aa21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 TTC3P53804 2025 aa21.47■■□□□ 1.03
LYSMD2-201ENST00000267838 TADA2AO75478 443 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 BDNFP23560 247 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 ARSEP51690 589 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 PTK6Q13882 451 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 BBS12Q6ZW61 710 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 GPRIN1Q7Z2K8 1008 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 NPAS4Q8IUM7 802 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 IQCKQ8N0W5 287 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 CALN1Q9BXU9 219 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 ADAM33Q9BZ11 813 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 CNGB3Q9NQW8 809 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 ZDHHC18Q9NUE0 388 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 GRHL1Q9NZI5 618 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 NLRC5Q86WI3 1866 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 CST8O60676 142 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 DAOAP59103 153 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 GNGT1P63211 74 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 TTMPQ5BVD1 217 aa21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 FBXO46Q6PJ61 603 aaPredicted RBP21.46■■□□□ 1.03
LYSMD2-201ENST00000267838 STRADAQ7RTN6 431 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms