RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 PCDHA11Q9Y5I1 949 aa23.75■■□□□ 1.39
UFD1-201ENST00000263202 LAMA2P24043 3122 aaKnown RBP23.74■■□□□ 1.39
UFD1-201ENST00000263202 TEX28O15482 410 aa23.74■■□□□ 1.39
UFD1-201ENST00000263202 SEC24AO95486 1093 aa23.74■■□□□ 1.39
UFD1-201ENST00000263202 LTFP02788 710 aa23.74■■□□□ 1.39
UFD1-201ENST00000263202 FYNP06241 537 aa23.74■■□□□ 1.39
UFD1-201ENST00000263202 RPL10AP62906 217 aaKnown RBP23.74■■□□□ 1.39
UFD1-201ENST00000263202 IFRD2Q12894 506 aaPredicted RBP23.74■■□□□ 1.39
UFD1-201ENST00000263202 TMC7Q7Z402 723 aa23.74■■□□□ 1.39
UFD1-201ENST00000263202 SPPL3Q8TCT6 385 aa23.74■■□□□ 1.39
UFD1-201ENST00000263202 GPR152Q8TDT2 470 aa23.74■■□□□ 1.39
UFD1-201ENST00000263202 MS4A14Q96JA4 679 aa23.74■■□□□ 1.39
UFD1-201ENST00000263202 CXCL14O95715 111 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 TFE3P19532 575 aaPredicted RBP23.73■■□□□ 1.39
UFD1-201ENST00000263202 NOS2P35228 1153 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 TUFMP49411 452 aaKnown RBP23.73■■□□□ 1.39
UFD1-201ENST00000263202 RWDD2BP57060 319 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 ERVFC1P60507 584 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 ATP11AP98196 1134 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 CDO1Q16878 200 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 RAB6CQ53S08 254 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 CARD6Q9BX69 1037 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 ADAM33Q9BZ11 813 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 RAB6CQ9H0N0 254 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 IL37Q9NZH6 218 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.73■■□□□ 1.39
UFD1-201ENST00000263202 RB1P06400 928 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 CNPP09543 421 aaKnown RBP23.73■■□□□ 1.39
UFD1-201ENST00000263202 ATF6P18850 670 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 DNAJB1P25685 340 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 CA8P35219 290 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 PCK1P35558 622 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 USP46P62068 366 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 SLC25A11Q02978 314 aaKnown RBP23.73■■□□□ 1.39
UFD1-201ENST00000263202 DCAF6Q58WW2 860 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 LRRC38Q5VT99 294 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 FAM172AQ8WUF8 416 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 POF1BQ8WVV4 589 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 CENPIQ92674 756 aaPredicted RBP23.73■■□□□ 1.39
UFD1-201ENST00000263202 TCF25Q9BQ70 676 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 FBXO44Q9H4M3 255 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 EHD2Q9NZN4 543 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 MTUS1Q9ULD2 1270 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 SCML2Q9UQR0 700 aa23.73■■□□□ 1.39
UFD1-201ENST00000263202 YBX2Q9Y2T7 364 aaKnown RBP23.73■■□□□ 1.39
UFD1-201ENST00000263202 PDE2AO00408 941 aaPredicted RBP23.72■■□□□ 1.39
UFD1-201ENST00000263202 CEP104O60308 925 aa23.72■■□□□ 1.39
UFD1-201ENST00000263202 MIPP30301 263 aa23.72■■□□□ 1.39
UFD1-201ENST00000263202 UBE3AQ05086 875 aa23.72■■□□□ 1.39
UFD1-201ENST00000263202 ZNF211Q13398 564 aaPredicted RBP23.72■■□□□ 1.39
UFD1-201ENST00000263202 SYPL2Q5VXT5 272 aa23.72■■□□□ 1.39
UFD1-201ENST00000263202 TXNRD3NBQ6F5E7 133 aa23.72■■□□□ 1.39
UFD1-201ENST00000263202 DENND5BQ6ZUT9 1274 aa23.72■■□□□ 1.39
UFD1-201ENST00000263202 NT5C3BQ969T7 300 aa23.72■■□□□ 1.39
UFD1-201ENST00000263202 NAALADL1Q9UQQ1 740 aa23.72■■□□□ 1.39
UFD1-201ENST00000263202 IRAK3Q9Y616 596 aa23.72■■□□□ 1.39
UFD1-201ENST00000263202 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.71■■□□□ 1.39
UFD1-201ENST00000263202 DESP17661 470 aa23.71■■□□□ 1.39
UFD1-201ENST00000263202 GJC1P36383 396 aa23.71■■□□□ 1.39
UFD1-201ENST00000263202 SLC25A52Q3SY17 297 aa23.71■■□□□ 1.39
UFD1-201ENST00000263202 BSPRYQ5W0U4 402 aa23.71■■□□□ 1.39
UFD1-201ENST00000263202 RASGEF1CQ8N431 466 aa23.71■■□□□ 1.39
UFD1-201ENST00000263202 GOLGA1Q92805 767 aa23.71■■□□□ 1.39
UFD1-201ENST00000263202 CEP295NLQ96MC4 621 aa23.71■■□□□ 1.39
UFD1-201ENST00000263202 TBCBQ99426 244 aa23.71■■□□□ 1.39
UFD1-201ENST00000263202 NPY6RQ99463 290 aa23.71■■□□□ 1.39
UFD1-201ENST00000263202 CYP4F11Q9HBI6 524 aa23.71■■□□□ 1.39
UFD1-201ENST00000263202 NGRNQ9NPE2 291 aaKnown RBP23.71■■□□□ 1.39
UFD1-201ENST00000263202 ENTPD7Q9NQZ7 604 aa23.71■■□□□ 1.39
UFD1-201ENST00000263202 SMARCAL1Q9NZC9 954 aa23.71■■□□□ 1.39
UFD1-201ENST00000263202 RNF14Q9UBS8 474 aa23.71■■□□□ 1.39
UFD1-201ENST00000263202 FAM92AA1XBS5 289 aa23.7■■□□□ 1.39
UFD1-201ENST00000263202 H0YGN5 161 aa23.7■■□□□ 1.39
UFD1-201ENST00000263202 CAPN9O14815 690 aa23.7■■□□□ 1.39
UFD1-201ENST00000263202 RTN3O95197 1032 aaPredicted RBP23.7■■□□□ 1.39
UFD1-201ENST00000263202 SLU7O95391 586 aaKnown RBP23.7■■□□□ 1.39
UFD1-201ENST00000263202 PYGMP11217 842 aa23.7■■□□□ 1.39
UFD1-201ENST00000263202 IL1R2P27930 398 aa23.7■■□□□ 1.39
UFD1-201ENST00000263202 HDAC4P56524 1084 aa23.7■■□□□ 1.39
UFD1-201ENST00000263202 HADHQ16836 314 aaKnown RBP23.7■■□□□ 1.39
UFD1-201ENST00000263202 ATP13A4Q4VNC1 1196 aa23.7■■□□□ 1.39
UFD1-201ENST00000263202 POLNQ7Z5Q5 900 aa23.7■■□□□ 1.39
UFD1-201ENST00000263202 KATNAL2Q8IYT4 538 aa23.7■■□□□ 1.39
UFD1-201ENST00000263202 CEP112Q8N8E3 955 aa23.7■■□□□ 1.39
UFD1-201ENST00000263202 GIPC2Q8TF65 315 aa23.7■■□□□ 1.39
UFD1-201ENST00000263202 SAMD11Q96NU1 681 aa23.7■■□□□ 1.39
UFD1-201ENST00000263202 TGS1Q96RS0 853 aaKnown RBP23.7■■□□□ 1.39
UFD1-201ENST00000263202 COMMD8Q9NX08 183 aa23.7■■□□□ 1.39
UFD1-201ENST00000263202 STAP1Q9ULZ2 295 aa23.7■■□□□ 1.39
UFD1-201ENST00000263202 USP18Q9UMW8 372 aa23.7■■□□□ 1.39
UFD1-201ENST00000263202 NCAM1P13591 858 aa23.7■■□□□ 1.38
UFD1-201ENST00000263202 PBX2P40425 430 aa23.7■■□□□ 1.38
UFD1-201ENST00000263202 SULT1E1P49888 294 aa23.7■■□□□ 1.38
UFD1-201ENST00000263202 YWHAGP61981 247 aaKnown RBP eCLIP23.7■■□□□ 1.38
UFD1-201ENST00000263202 PITX1P78337 314 aaPredicted RBP23.7■■□□□ 1.38
UFD1-201ENST00000263202 CKAP4Q07065 602 aaKnown RBP23.7■■□□□ 1.38
UFD1-201ENST00000263202 MTMR3Q13615 1198 aa23.7■■□□□ 1.38
UFD1-201ENST00000263202 CCDC181Q5TID7 509 aa23.7■■□□□ 1.38
UFD1-201ENST00000263202 OTUD1Q5VV17 481 aaPredicted RBP23.7■■□□□ 1.38
UFD1-201ENST00000263202 AADACL2Q6P093 401 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms