RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 ASGR1P07306 291 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 UBA1P22314 1058 aaKnown RBP14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 ACAT1P24752 427 aaKnown RBP14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 CHI3L1P36222 383 aaPredicted RBP14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 ATP5C1P36542 298 aaKnown RBP14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 CARSP49589 748 aaKnown RBP14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 MYL6P60660 151 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 TTC39BQ5VTQ0 682 aaPredicted RBP14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 EXD1Q8NHP7 514 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 IL17RAQ96F46 866 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 DNAJC1Q96KC8 554 aaKnown RBP14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 CAMKK2Q96RR4 588 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 FICDQ9BVA6 458 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 FRMD8Q9BZ67 464 aaPredicted RBP14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 EXO5Q9H790 373 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 ANLNQ9NQW6 1124 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 AP4E1Q9UPM8 1137 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 EIF3LQ9Y262 564 aaKnown RBP14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 GPC1P35052 558 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 RFX3P48380 749 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 PTPN11Q06124 597 aaPredicted RBP14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 BCL2L1Q07817 233 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 HECTD3Q5T447 861 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 CACUL1Q86Y37 369 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 KRT78Q8N1N4 520 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 AGR3Q8TD06 166 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 SLC5A5Q92911 643 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 ABCG4Q9H172 646 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 FANCEQ9HB96 536 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 TDRKHQ9Y2W6 561 aaKnown RBP14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 GUCA1CO95843 209 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 ITIH2P19823 946 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 STK4Q13043 487 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 CENPPQ6IPU0 288 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 ILDR1Q86SU0 546 aaPredicted RBP14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 ING2Q9H160 280 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 PPCSQ9HAB8 311 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 CYP39A1Q9NYL5 469 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 FAM198AQ9UFP1 575 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 TRIM16O95361 564 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 FAM83EQ2M2I3 478 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 CACHD1Q5VU97 1274 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 USP45Q70EL2 814 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 B4GALNT2Q8NHY0 566 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 ZNF669Q96BR6 464 aaPredicted RBP14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 C17orf80Q9BSJ5 609 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 OSBPL8Q9BZF1 889 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 SNX5Q9Y5X3 404 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 TMEM131LA2VDJ0 1609 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 APODP05090 189 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 PLA2G4AP47712 749 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 ARFIP2P53365 341 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 GIT2Q14161 759 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 FAM163AQ96GL9 167 aaPredicted RBP14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 GAD1Q99259 594 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 XAB2Q9HCS7 855 aaKnown RBP14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 ABCC13Q9NSE7 274 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 CDYLQ9Y232 598 aa14.03□□□□□ -0.16
PDGFRB-201ENST00000261799 SSU72P8A0A1W2PR75 194 aa14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 CCDC22O60826 627 aa14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 USP17L7P0C7H9 530 aa14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 RAB30Q15771 203 aa14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 EPC2Q52LR7 807 aa14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 FAM71DQ8N9W8 422 aa14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 TMEM159Q96B96 161 aa14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 SAE1Q9UBE0 346 aaPredicted RBP14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 PHLPP1O60346 1717 aa14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 A0A088AWK7 358 aa14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 SLC9A1P19634 815 aa14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 ZNF10P21506 573 aaPredicted RBP14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 MAP3K10Q02779 954 aa14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 TROAPQ12815 778 aa14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 CDC16Q13042 620 aa14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 IFT88Q13099 833 aa14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 SNCBQ16143 134 aa14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 ZPBP2Q6X784 338 aa14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 ADGRA1Q86SQ6 560 aa14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 MSL3Q8N5Y2 521 aaKnown RBP14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 MRGBPQ9NV56 204 aa14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 NEU2Q9Y3R4 380 aa14.02□□□□□ -0.16
PDGFRB-201ENST00000261799 OR56A5P0C7T3 313 aa14.02□□□□□ -0.17
PDGFRB-201ENST00000261799 IL10P22301 178 aa14.02□□□□□ -0.17
PDGFRB-201ENST00000261799 ADIGQ0VDE8 80 aa14.02□□□□□ -0.17
PDGFRB-201ENST00000261799 C6orf10Q5SRN2 563 aa14.02□□□□□ -0.17
PDGFRB-201ENST00000261799 AGAP9Q5VTM2 703 aa14.02□□□□□ -0.17
PDGFRB-201ENST00000261799 PRUNE1Q86TP1 453 aa14.02□□□□□ -0.17
PDGFRB-201ENST00000261799 FAM162AQ96A26 154 aa14.02□□□□□ -0.17
PDGFRB-201ENST00000261799 PHF21AQ96BD5 680 aa14.02□□□□□ -0.17
PDGFRB-201ENST00000261799 A0A1W2PQJ5 194 aa14.02□□□□□ -0.17
PDGFRB-201ENST00000261799 BTBD19C9JJ37 291 aa14.02□□□□□ -0.17
PDGFRB-201ENST00000261799 INHAP05111 366 aa14.02□□□□□ -0.17
PDGFRB-201ENST00000261799 XRCC4Q13426 336 aa14.02□□□□□ -0.17
PDGFRB-201ENST00000261799 FOXR1Q6PIV2 292 aa14.02□□□□□ -0.17
PDGFRB-201ENST00000261799 PPIL6Q8IXY8 311 aa14.02□□□□□ -0.17
PDGFRB-201ENST00000261799 EDEM1Q92611 657 aa14.02□□□□□ -0.17
PDGFRB-201ENST00000261799 ERLEC1Q96DZ1 483 aa14.02□□□□□ -0.17
PDGFRB-201ENST00000261799 STAMBPL1Q96FJ0 436 aa14.02□□□□□ -0.17
PDGFRB-201ENST00000261799 CISHQ9NSE2 258 aa14.02□□□□□ -0.17
PDGFRB-201ENST00000261799 GIT1Q9Y2X7 761 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms