RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 EURLQ9NYK6 297 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 MAP3K20Q9NYL2 800 aaKnown RBP14.05□□□□□ -0.16
VHL-201ENST00000256474 BTBD7Q9P203 1132 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 HES2Q9Y543 173 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 WASF2Q9Y6W5 498 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 CCDC22O60826 627 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 HOXC6P09630 235 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 ZCCHC18P0CG32 403 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 STAG3L1P0CL83 205 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 NME8Q8N427 588 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 FAM172AQ8WUF8 416 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 UCMAQ8WVF2 138 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 NDRG1Q92597 394 aaKnown RBP14.05□□□□□ -0.16
VHL-201ENST00000256474 FOXP3Q9BZS1 431 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 TSPAN16Q9UKR8 245 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 DOCK5Q9H7D0 1870 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 ZNF831Q5JPB2 1677 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 LYPLA1O75608 230 aaPredicted RBP14.05□□□□□ -0.16
VHL-201ENST00000256474 KCNA4P22459 653 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 BST1Q10588 318 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 PEX6Q13608 980 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 SNX30Q5VWJ9 437 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 CATSPERGQ6ZRH7 1159 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 MPP5Q8N3R9 675 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 CDT1Q9H211 546 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 PGAP2Q9UHJ9 254 aa14.05□□□□□ -0.16
VHL-201ENST00000256474 NVLO15381 856 aaKnown RBP14.04□□□□□ -0.16
VHL-201ENST00000256474 KRT37O76014 449 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 LSM8O95777 96 aaKnown RBP14.04□□□□□ -0.16
VHL-201ENST00000256474 GPD1P21695 349 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 OSBPP22059 807 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 RTP1P59025 263 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 RPL10AP62906 217 aaKnown RBP14.04□□□□□ -0.16
VHL-201ENST00000256474 XRRA1Q6P2D8 792 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 MPZL3Q6UWV2 235 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 DENND5BQ6ZUT9 1274 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 FAM183BPQ6ZVS7 135 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 SMC1BQ8NDV3 1235 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 TMEM176AQ96HP8 235 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 ELP3Q9H9T3 547 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 KCNG1Q9UIX4 513 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 LTBP1Q14766 1721 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 KIF13BQ9NQT8 1826 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 USP1O94782 785 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 TFE3P19532 575 aaPredicted RBP14.04□□□□□ -0.16
VHL-201ENST00000256474 EFNA5P52803 228 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 PDE1BQ01064 536 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 ACVR2BQ13705 512 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 UBAP2LQ14157 1087 aaKnown RBP14.04□□□□□ -0.16
VHL-201ENST00000256474 GOLGA7BQ2TAP0 167 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 BANPQ8N9N5 519 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 PPFIBP2Q8ND30 876 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 KIF12Q96FN5 646 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 CLMNQ96JQ2 1002 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 KANSL3Q9P2N6 904 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 APOC4-APOC2K7ER74 178 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 ZMPSTE24O75844 475 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 TRUB2O95900 331 aaKnown RBP14.04□□□□□ -0.16
VHL-201ENST00000256474 APOC2P02655 101 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 TXNP10599 105 aaKnown RBP14.04□□□□□ -0.16
VHL-201ENST00000256474 NCF2P19878 526 aaPredicted RBP14.04□□□□□ -0.16
VHL-201ENST00000256474 RXRBP28702 533 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 RFC5P40937 340 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 ACSBG2Q5FVE4 666 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 MAP1SQ66K74 1059 aaPredicted RBP14.04□□□□□ -0.16
VHL-201ENST00000256474 ADGRD1Q6QNK2 874 aa14.04□□□□□ -0.16
VHL-201ENST00000256474 CPSF3Q9UKF6 684 aaKnown RBP14.04□□□□□ -0.16
VHL-201ENST00000256474 C2CD2LO14523 706 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 TXNDC9O14530 226 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 NPTXRO95502 500 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 AMPD1P23109 780 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 SDC4P31431 198 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 NUMBP49757 651 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 POLE2P56282 527 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 GBE1Q04446 702 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 SLC45A4Q5BKX6 768 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 SLC4A11Q8NBS3 891 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 CLEC4CQ8WTT0 213 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 E2F7Q96AV8 911 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 BTBD10Q9BSF8 475 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 FARP1Q9Y4F1 1045 aaPredicted RBP14.03□□□□□ -0.16
VHL-201ENST00000256474 MYH9P35579 1960 aaKnown RBP14.03□□□□□ -0.16
VHL-201ENST00000256474 COL4A5P29400 1685 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 DPPA5A6NC42 116 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 SOWAHBA6NEL2 793 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 SPDYE5A6NIY4 337 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 USP12O75317 370 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 KCNA3P22001 575 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 TUBP50607 506 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 C1orf146Q5VVC0 180 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 IER5Q5VY09 327 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 MAP7D3Q8IWC1 876 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 KLC2Q9H0B6 622 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 XYLT2Q9H1B5 865 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 VPS11Q9H270 941 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 RSAD1Q9HA92 442 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 TAS2R1Q9NYW7 299 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 TXNDC16Q9P2K2 825 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 MFHAS1Q9Y4C4 1052 aa14.03□□□□□ -0.16
VHL-201ENST00000256474 APOL1O14791 398 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms