RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 SMARCD1Q96GM5 515 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 TMEM39AQ9NV64 488 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 TBX21Q9UL17 535 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 KIAA0100Q14667 2235 aaKnown RBP19.76■□□□□ 0.75
TRIM47-201ENST00000254816 TBKBP1A7MCY6 615 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 NT5C1B-RDH14C9J2C7 533 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 TMEM189-UBE2V1I3L0A0 370 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 PAX3P23760 479 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 ECHS1P30084 290 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 LBX1P52954 281 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 TTMPQ5BVD1 217 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 FOXR1Q6PIV2 292 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 HFE2Q6ZVN8 426 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 KCTD6Q8NC69 237 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 SPATA18Q8TC71 538 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 B3GALT6Q96L58 329 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 ULBP1Q9BZM6 244 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 GPATCH2LQ9NWQ4 482 aa19.76■□□□□ 0.75
TRIM47-201ENST00000254816 ZNF638Q14966 1978 aaKnown RBP19.75■□□□□ 0.75
TRIM47-201ENST00000254816 PRPSAP2O60256 369 aa19.75■□□□□ 0.75
TRIM47-201ENST00000254816 GJA8P48165 433 aa19.75■□□□□ 0.75
TRIM47-201ENST00000254816 HDAC4P56524 1084 aa19.75■□□□□ 0.75
TRIM47-201ENST00000254816 DYNLT1P63172 113 aa19.75■□□□□ 0.75
TRIM47-201ENST00000254816 LRRC26Q2I0M4 334 aa19.75■□□□□ 0.75
TRIM47-201ENST00000254816 EFHC1Q5JVL4 640 aa19.75■□□□□ 0.75
TRIM47-201ENST00000254816 ALS2CLQ60I27 953 aa19.75■□□□□ 0.75
TRIM47-201ENST00000254816 NPAS4Q8IUM7 802 aa19.75■□□□□ 0.75
TRIM47-201ENST00000254816 DEFB106AQ8N104 65 aa19.75■□□□□ 0.75
TRIM47-201ENST00000254816 ERP44Q9BS26 406 aa19.75■□□□□ 0.75
TRIM47-201ENST00000254816 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.75■□□□□ 0.75
TRIM47-201ENST00000254816 FAM187AA6NFU0 413 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 HHLA1C9JL84 531 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 KRT14P02533 472 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 SLC11A1P49279 550 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 FNTAP49354 379 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 COPS2P61201 443 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 C1orf53Q5VUE5 145 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 CEP57Q86XR8 500 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 ARMC5Q96C12 935 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 VWCEQ96DN2 955 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 TBCBQ99426 244 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 RAB17Q9H0T7 212 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.74■□□□□ 0.75
TRIM47-201ENST00000254816 SNX24Q9Y343 169 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 PATJQ8NI35 1801 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 OPA1O60313 960 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 TJP3O95049 919 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 SCNN1AP37088 669 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 PITX1P78337 314 aaPredicted RBP19.74■□□□□ 0.75
TRIM47-201ENST00000254816 TSPY1Q01534 308 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 MMRN1Q13201 1228 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 ZC3H12AQ5D1E8 599 aaKnown RBP19.74■□□□□ 0.75
TRIM47-201ENST00000254816 DNAJC21Q5F1R6 531 aaKnown RBP19.74■□□□□ 0.75
TRIM47-201ENST00000254816 DUPD1Q68J44 220 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 LRRC31Q6UY01 552 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 CMASQ8NFW8 434 aaPredicted RBP19.74■□□□□ 0.75
TRIM47-201ENST00000254816 C11orf84Q9BUA3 381 aaPredicted RBP19.74■□□□□ 0.75
TRIM47-201ENST00000254816 CALN1Q9BXU9 219 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 GPR62Q9BZJ7 368 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 MARCH5Q9NX47 278 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 ADAM28Q9UKQ2 775 aa19.74■□□□□ 0.75
TRIM47-201ENST00000254816 ARHGEF37A1IGU5 675 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 GOLGA8KD6RF30 607 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 CLTBP09497 229 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 USP17L7P0C7H9 530 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 PTPN9P43378 593 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 DCAF6Q58WW2 860 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 CFAP58Q5T655 872 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 PIK3R5Q8WYR1 880 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 SEC14L1Q92503 715 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 CCDC114Q96M63 670 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 DDX23Q9BUQ8 820 aaKnown RBP19.73■□□□□ 0.75
TRIM47-201ENST00000254816 C11orf49Q9H6J7 331 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 CSNK1G1Q9HCP0 422 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 SAE1Q9UBE0 346 aaPredicted RBP19.73■□□□□ 0.75
TRIM47-201ENST00000254816 RASAL2Q9UJF2 1139 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 ALDH2P05091 517 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 CDH6P55285 790 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 YWHAZP63104 245 aaKnown RBP19.73■□□□□ 0.75
TRIM47-201ENST00000254816 CUL1Q13616 776 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 CCNG2Q16589 344 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 CA9Q16790 459 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 SLC39A12Q504Y0 691 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 RAB41Q5JT25 222 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 FAM171A1Q5VUB5 890 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 MAGEB5Q9BZ81 275 aa19.73■□□□□ 0.75
TRIM47-201ENST00000254816 SYNJ2BP-COX16A0A087WUM0 186 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 YJEFN3A6XGL0 299 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 E7ENQ6 273 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 TRAPPC3O43617 180 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 ECEL1O95672 775 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 ITGB8P26012 769 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 PTPN7P35236 360 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 MATKP42679 507 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 SULT1E1P49888 294 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 DAOAP59103 153 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 KRT17Q04695 432 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 PPP1R7Q15435 360 aa19.72■□□□□ 0.75
TRIM47-201ENST00000254816 TRIP13Q15645 432 aaPredicted RBP19.72■□□□□ 0.75
TRIM47-201ENST00000254816 VARS2Q5ST30 1063 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms