RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 C9orf57Q5W0N0 161 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 LRRC52Q8N7C0 313 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 MAGEB18Q96M61 343 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 DCTN4Q9UJW0 460 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 M0QYT0 321 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 KRT38O76015 456 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 KLRC2P26717 231 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 SESN2P58004 480 aaPredicted RBP16.35■□□□□ 0.21
RFX1-201ENST00000254325 IRX4P78413 519 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 ADIGQ0VDE8 80 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 MFSD14CQ5VZR4 134 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 MCRS1Q96EZ8 462 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 UBN1Q9NPG3 1134 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 AAASQ9NRG9 546 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 RGPD3A6NKT7 1758 aaPredicted RBP16.35■□□□□ 0.21
RFX1-201ENST00000254325 RGPD4Q7Z3J3 1758 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 PPEF2O14830 753 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 ALOX15BO15296 676 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 FAM200BP0CF97 657 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 ZDHHC17Q8IUH5 632 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 SLC7A14Q8TBB6 771 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 FAXDC2Q96IV6 333 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 SLC13A1Q9BZW2 595 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 ZFYVE28Q9HCC9 887 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 SLC38A7Q9NVC3 462 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 TIMM13Q9Y5L4 95 aaPredicted RBP16.34■□□□□ 0.21
RFX1-201ENST00000254325 TREHO43280 583 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 GDF10P55107 478 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 ACTN3Q08043 901 aaPredicted RBP16.34■□□□□ 0.21
RFX1-201ENST00000254325 ITIH4Q14624 930 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 FSCN1Q16658 493 aaKnown RBP16.34■□□□□ 0.21
RFX1-201ENST00000254325 RNASEH2BQ5TBB1 312 aaKnown RBP16.34■□□□□ 0.21
RFX1-201ENST00000254325 ZNF467Q7Z7K2 595 aaPredicted RBP16.34■□□□□ 0.21
RFX1-201ENST00000254325 GPATCH11Q8N954 259 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 NPLOC4Q8TAT6 608 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 PRCCQ92733 491 aaPredicted RBP16.34■□□□□ 0.21
RFX1-201ENST00000254325 SMIM35A0A1B0GVV1 85 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 TGM2P21980 687 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 SNX17Q15036 470 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 ANKRD20A8PQ5CZ79 823 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 ZNF449Q6P9G9 518 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 LPIN3Q9BQK8 851 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 EPB41L4BQ9H329 900 aa16.34■□□□□ 0.21
RFX1-201ENST00000254325 A0A0G2JND7 137 aa16.33■□□□□ 0.21
RFX1-201ENST00000254325 SMIM28A0A1B0GU29 152 aa16.33■□□□□ 0.21
RFX1-201ENST00000254325 IVDP26440 423 aa16.33■□□□□ 0.21
RFX1-201ENST00000254325 FKBP1BP68106 108 aa16.33■□□□□ 0.21
RFX1-201ENST00000254325 MXRA7P84157 204 aa16.33■□□□□ 0.21
RFX1-201ENST00000254325 SLC25A11Q02978 314 aaKnown RBP16.33■□□□□ 0.21
RFX1-201ENST00000254325 MDH1BQ5I0G3 518 aa16.33■□□□□ 0.21
RFX1-201ENST00000254325 PID1Q7Z2X4 250 aa16.33■□□□□ 0.21
RFX1-201ENST00000254325 SLC35B2Q8TB61 432 aa16.33■□□□□ 0.21
RFX1-201ENST00000254325 L3MBTL3Q96JM7 780 aaPredicted RBP16.33■□□□□ 0.21
RFX1-201ENST00000254325 ECT2Q9H8V3 914 aa16.33■□□□□ 0.21
RFX1-201ENST00000254325 DERAQ9Y315 318 aa16.33■□□□□ 0.21
RFX1-201ENST00000254325 C2CD4BA6NLJ0 364 aa16.33■□□□□ 0.21
RFX1-201ENST00000254325 ABLIM1O14639 778 aa16.33■□□□□ 0.21
RFX1-201ENST00000254325 FAM189A1O60320 539 aa16.33■□□□□ 0.21
RFX1-201ENST00000254325 SCTRP47872 440 aa16.33■□□□□ 0.21
RFX1-201ENST00000254325 ANKRD22Q5VYY1 191 aa16.33■□□□□ 0.21
RFX1-201ENST00000254325 RHBDF2Q6PJF5 856 aa16.33■□□□□ 0.21
RFX1-201ENST00000254325 DEFB106AQ8N104 65 aa16.33■□□□□ 0.21
RFX1-201ENST00000254325 UBR7Q8N806 425 aa16.33■□□□□ 0.21
RFX1-201ENST00000254325 SNX27Q96L92 541 aa16.33■□□□□ 0.21
RFX1-201ENST00000254325 DPEP3Q9H4B8 488 aa16.33■□□□□ 0.21
RFX1-201ENST00000254325 FER1L6Q2WGJ9 1857 aa16.33■□□□□ 0.2
RFX1-201ENST00000254325 KBTBD13C9JR72 458 aa16.33■□□□□ 0.2
RFX1-201ENST00000254325 TULP2O00295 520 aa16.33■□□□□ 0.2
RFX1-201ENST00000254325 SPAG6O75602 509 aa16.33■□□□□ 0.2
RFX1-201ENST00000254325 MAP3K7CLP57077 242 aa16.33■□□□□ 0.2
RFX1-201ENST00000254325 EMC10Q5UCC4 262 aa16.33■□□□□ 0.2
RFX1-201ENST00000254325 ANKRD52Q8NB46 1076 aa16.33■□□□□ 0.2
RFX1-201ENST00000254325 CPT1BQ92523 772 aa16.33■□□□□ 0.2
RFX1-201ENST00000254325 KIF9Q9HAQ2 790 aa16.33■□□□□ 0.2
RFX1-201ENST00000254325 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.33■□□□□ 0.2
RFX1-201ENST00000254325 AMPD1P23109 780 aa16.33■□□□□ 0.2
RFX1-201ENST00000254325 RWDD4Q6NW29 188 aaKnown RBP16.33■□□□□ 0.2
RFX1-201ENST00000254325 ANKS1BQ7Z6G8 1248 aa16.33■□□□□ 0.2
RFX1-201ENST00000254325 CYP4X1Q8N118 509 aa16.33■□□□□ 0.2
RFX1-201ENST00000254325 CKAP2Q8WWK9 683 aa16.33■□□□□ 0.2
RFX1-201ENST00000254325 ATXN2LQ8WWM7 1075 aaKnown RBP16.33■□□□□ 0.2
RFX1-201ENST00000254325 LRRC37BQ96QE4 947 aa16.33■□□□□ 0.2
RFX1-201ENST00000254325 AP1G2O75843 785 aa16.32■□□□□ 0.2
RFX1-201ENST00000254325 PAN2Q504Q3 1202 aaKnown RBP16.32■□□□□ 0.2
RFX1-201ENST00000254325 SREK1Q8WXA9 508 aaKnown RBP16.32■□□□□ 0.2
RFX1-201ENST00000254325 ALKBH8Q96BT7 664 aaKnown RBP16.32■□□□□ 0.2
RFX1-201ENST00000254325 KLC4Q9NSK0 619 aa16.32■□□□□ 0.2
RFX1-201ENST00000254325 GGA2Q9UJY4 613 aa16.32■□□□□ 0.2
RFX1-201ENST00000254325 EEF2KO00418 725 aaKnown RBP16.32■□□□□ 0.2
RFX1-201ENST00000254325 RASSF2P50749 326 aa16.32■□□□□ 0.2
RFX1-201ENST00000254325 OASLQ15646 514 aaKnown RBP16.32■□□□□ 0.2
RFX1-201ENST00000254325 FAM182AQ5T1J6 154 aa16.32■□□□□ 0.2
RFX1-201ENST00000254325 YTHDF3Q7Z739 585 aaKnown RBP16.32■□□□□ 0.2
RFX1-201ENST00000254325 GIMAP7Q8NHV1 300 aa16.32■□□□□ 0.2
RFX1-201ENST00000254325 TFB1MQ8WVM0 346 aaKnown RBP16.32■□□□□ 0.2
RFX1-201ENST00000254325 TBC1D31Q96DN5 1066 aa16.32■□□□□ 0.2
RFX1-201ENST00000254325 KRT82Q9NSB4 513 aa16.32■□□□□ 0.2
RFX1-201ENST00000254325 COL11A1P12107 1806 aaPredicted RBP16.32■□□□□ 0.2
RFX1-201ENST00000254325 TPI1P60174 286 aa16.32■□□□□ 0.2
RFX1-201ENST00000254325 PAF1Q8N7H5 531 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms