RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 RSAD1Q9HA92 442 aa19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 SRRDQ9UH36 339 aa19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 KIAA1257Q9ULG3 409 aa19.53■□□□□ 0.72
PDLIM4-201ENST00000253754 TRIP11Q15643 1979 aa19.52■□□□□ 0.72
PDLIM4-201ENST00000253754 C17orf102A2RUQ5 167 aa19.52■□□□□ 0.72
PDLIM4-201ENST00000253754 PAPSS1O43252 624 aaPredicted RBP19.52■□□□□ 0.72
PDLIM4-201ENST00000253754 MAP2K2P36507 400 aa19.52■□□□□ 0.72
PDLIM4-201ENST00000253754 BASP1P80723 227 aaKnown RBP19.52■□□□□ 0.72
PDLIM4-201ENST00000253754 CA9Q16790 459 aa19.52■□□□□ 0.72
PDLIM4-201ENST00000253754 ZNF618Q5T7W0 954 aa19.52■□□□□ 0.72
PDLIM4-201ENST00000253754 TRABD2AQ86V40 505 aa19.52■□□□□ 0.72
PDLIM4-201ENST00000253754 SESTD1Q86VW0 696 aa19.52■□□□□ 0.72
PDLIM4-201ENST00000253754 CKAP2Q8WWK9 683 aa19.52■□□□□ 0.72
PDLIM4-201ENST00000253754 FRMD8P1Q9BZ68 369 aaPredicted RBP19.52■□□□□ 0.72
PDLIM4-201ENST00000253754 TRIM6Q9C030 488 aaPredicted RBP19.52■□□□□ 0.72
PDLIM4-201ENST00000253754 RNF39Q9H2S5 420 aa19.52■□□□□ 0.72
PDLIM4-201ENST00000253754 PLEKHA5Q9HAU0 1116 aa19.52■□□□□ 0.72
PDLIM4-201ENST00000253754 UBN1Q9NPG3 1134 aa19.52■□□□□ 0.72
PDLIM4-201ENST00000253754 VGLL3A8MV65 326 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 H0YHG0 523 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 ENDOD1O94919 500 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 PDGFRBP09619 1106 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 CCDC130P13994 396 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 DARSP14868 501 aaKnown RBP19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 STX2P32856 288 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 C1QTNF8P60827 252 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 C9orf57Q5W0N0 161 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 NUGGCQ68CJ6 796 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 NOTUMQ6P988 496 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 DARS2Q6PI48 645 aaKnown RBP19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 C4orf33Q8N1A6 199 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 CFHR5Q9BXR6 569 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 GOLGA2P5Q9HBQ8 144 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 XPNPEP3Q9NQH7 507 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 XPO7Q9UIA9 1087 aaKnown RBP19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 GGT7Q9UJ14 662 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 KPNA6O60684 536 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 FGFR1P11362 822 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 IL4RP24394 825 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 CDC42EP1Q00587 391 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 ROR1Q01973 937 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 KRT81Q14533 505 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 NOMO1Q15155 1222 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 PCGF5Q86SE9 256 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 BEST2Q8NFU1 509 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 SLC35F5Q8WV83 523 aa19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 MTG1Q9BT17 334 aaPredicted RBP19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 PIN4Q9Y237 131 aaKnown RBP19.51■□□□□ 0.71
PDLIM4-201ENST00000253754 A8MXQ7 604 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 SPTLC1O15269 473 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 SNX3O60493 162 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 GNAT1P11488 350 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 LMO2P25791 158 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 HOXD10P28358 340 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 ADORA2BP29275 332 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 ATXN1P54253 815 aaKnown RBP19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 ARL4CP56559 192 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 SLC6A3Q01959 620 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 BBS9Q3SYG4 887 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 ALKAL1Q6UXT8 129 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 TTC39CQ8N584 583 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 ANKS4BQ8N8V4 417 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 FBXO36Q8NEA4 188 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 PYROXD1Q8WU10 500 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 P3H4Q92791 437 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 TGS1Q96RS0 853 aaKnown RBP19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 PAIP2Q9BPZ3 127 aaKnown RBP19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 SLC4A5Q9BY07 1137 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 NSRP1Q9H0G5 558 aaKnown RBP19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 UPF3AQ9H1J1 476 aaKnown RBP19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 NKIRAS1Q9NYS0 192 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 CCT8L1PA6NM43 557 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 KRT15P19012 456 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 WDR4P57081 412 aaKnown RBP19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 NBPF20Q3BBV1 942 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 RIBC1Q8N443 379 aaPredicted RBP19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 RNF157Q96PX1 679 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 MAGEB5Q9BZ81 275 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 CNTN3Q9P232 1028 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 DERAQ9Y315 318 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 ACTL7BQ9Y614 415 aa19.5■□□□□ 0.71
PDLIM4-201ENST00000253754 A0A1W2PPM1 405 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 SDC4P31431 198 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 FOXN2P32314 431 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 SCTRP47872 440 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 ITIH4Q14624 930 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 TMEM110Q86TL2 294 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 TDRPQ86YL5 185 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 IGDCC3Q8IVU1 814 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 PQLC3Q8N755 202 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 KBTBD7Q8WVZ9 684 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 SNRNP25Q9BV90 132 aaKnown RBP19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 TRABDQ9H4I3 376 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 HESX1Q9UBX0 185 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 RABGEF1Q9UJ41 708 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 HEY1Q9Y5J3 304 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 SCN10AQ9Y5Y9 1956 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 FAM47DPA6NHR8 397 aa19.49■□□□□ 0.71
PDLIM4-201ENST00000253754 H7C0C1 242 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms