RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 POLR2DO15514 142 aaKnown RBP10.96□□□□□ -0.65
VPS50-201ENST00000251739 KLRC4O43908 158 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 VNN1O95497 513 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 ZDHHC11BP0C7U3 371 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 PMLP29590 882 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 EIF2DP41214 584 aaKnown RBP10.96□□□□□ -0.65
VPS50-201ENST00000251739 CASP4P49662 377 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 TNNC1P63316 161 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 CUL4BQ13620 913 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 DHCR24Q15392 516 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 ELF2Q15723 593 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 KNOP1Q1ED39 458 aaKnown RBP10.96□□□□□ -0.65
VPS50-201ENST00000251739 SNX30Q5VWJ9 437 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 TDRD10Q5VZ19 366 aaKnown RBP10.96□□□□□ -0.65
VPS50-201ENST00000251739 TCEAL6Q6IPX3 200 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 RHBDF2Q6PJF5 856 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 FAM35AQ86V20 835 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 C12orf40Q86WS4 652 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 SFTPA1Q8IWL2 248 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 C12orf50Q8NA57 414 aaPredicted RBP10.96□□□□□ -0.65
VPS50-201ENST00000251739 TTC16Q8NEE8 873 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 TSTD1Q8NFU3 115 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 OR6B3Q8NGW1 331 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 OLIG1Q8TAK6 271 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 PARD3BQ8TEW8 1205 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 OVCA2Q8WZ82 227 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 TCEAL3Q969E4 200 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 SNX21Q969T3 373 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 THAP11Q96EK4 314 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 SLITRK1Q96PX8 696 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 DMAC2Q9NW81 257 aa10.96□□□□□ -0.65
VPS50-201ENST00000251739 ANKRD11Q6UB99 2663 aaPredicted RBP10.95□□□□□ -0.66
VPS50-201ENST00000251739 E2F8A0AVK6 867 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 LRRIQ3A6PVS8 624 aaPredicted RBP10.95□□□□□ -0.66
VPS50-201ENST00000251739 A8MXQ7 604 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 SLC9A3R1O14745 358 aaPredicted RBP10.95□□□□□ -0.66
VPS50-201ENST00000251739 RTN3O95197 1032 aaPredicted RBP10.95□□□□□ -0.66
VPS50-201ENST00000251739 YWHAQP27348 245 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 KIR2DL1P43626 348 aaPredicted RBP10.95□□□□□ -0.66
VPS50-201ENST00000251739 TUBP50607 506 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 MRPS21P82921 87 aaKnown RBP10.95□□□□□ -0.66
VPS50-201ENST00000251739 SHC2P98077 582 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 PSMD2Q13200 908 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 CRY1Q16526 586 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 TUSC1Q2TAM9 212 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 C2orf27AQ580R0 203 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 IL31Q6EBC2 164 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 DDX42Q86XP3 938 aaKnown RBP eCLIP10.95□□□□□ -0.66
VPS50-201ENST00000251739 SLC9A9Q8IVB4 645 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 ETFBKMTQ8IXQ9 262 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 FUKQ8N0W3 1084 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 NUP93Q8N1F7 819 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 IL17RCQ8NAC3 791 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 KIAA0895Q8NCT3 520 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 PDZD8Q8NEN9 1154 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 ZMIZ2Q8NF64 920 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 MDGA1Q8NFP4 955 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 SYAP1Q96A49 352 aaPredicted RBP10.95□□□□□ -0.66
VPS50-201ENST00000251739 LSM14BQ9BX40 385 aaKnown RBP10.95□□□□□ -0.66
VPS50-201ENST00000251739 SDCBP2Q9H190 292 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 BLZF1Q9H2G9 400 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 SLC39A2Q9NP94 309 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 SMPD4Q9NXE4 827 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 CFAP97Q9P2B7 532 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 NXF1Q9UBU9 619 aaKnown RBP10.95□□□□□ -0.66
VPS50-201ENST00000251739 PCDHGC3Q9UN70 934 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 PCDHA7Q9UN72 937 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 PCDH15Q96QU1 1955 aa10.95□□□□□ -0.66
VPS50-201ENST00000251739 LNP1A1A4G5 178 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 SCAMP3O14828 347 aaKnown RBP10.94□□□□□ -0.66
VPS50-201ENST00000251739 COCHO43405 550 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 GREM1O60565 184 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 KRT37O76014 449 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 RHOBTB1O94844 696 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 KAT7O95251 611 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 ADH1CP00326 375 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 F13A1P00488 732 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 C4BPAP04003 597 aaKnown RBP10.94□□□□□ -0.66
VPS50-201ENST00000251739 ZSCAN22P10073 491 aaPredicted RBP10.94□□□□□ -0.66
VPS50-201ENST00000251739 BCKDHBP21953 392 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 SLC6A11P48066 632 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 DGKEP52429 567 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 AP3M2P53677 418 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 CDH8P55286 799 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 STK4Q13043 487 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 TRPC3Q13507 836 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 NCOA4Q13772 614 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 ZNF699Q32M78 642 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 ZACNQ401N2 412 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 HSF5Q4G112 596 aaPredicted RBP10.94□□□□□ -0.66
VPS50-201ENST00000251739 N4BP2L1Q5TBK1 243 aaPredicted RBP10.94□□□□□ -0.66
VPS50-201ENST00000251739 ANO7Q6IWH7 933 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 C11orf74Q86VG3 221 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 GRAMD1CQ8IYS0 662 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 SCAMP5Q8TAC9 235 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 GOLGA5Q8TBA6 731 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 FBXO32Q969P5 355 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 OTUB2Q96DC9 234 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 KCNK16Q96T55 309 aa10.94□□□□□ -0.66
VPS50-201ENST00000251739 PNKPQ96T60 521 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms