RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 PPEF2O14830 753 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 TOP3BO95985 862 aaKnown RBP10.54□□□□□ -0.72
COPB1-201ENST00000249923 CETN2P41208 172 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 IRX4P78413 519 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 FAM102AQ5T9C2 384 aaPredicted RBP10.54□□□□□ -0.72
COPB1-201ENST00000249923 ZNF534Q76KX8 674 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 CCDC125Q86Z20 511 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 TTC8Q8TAM2 541 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 LTBP3Q9NS15 1303 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 C2CD2LO14523 706 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 ZCCHC18P0CG32 403 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 ABL2P42684 1182 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 ZNF143P52747 638 aaPredicted RBP10.54□□□□□ -0.72
COPB1-201ENST00000249923 YWHAZP63104 245 aaKnown RBP10.54□□□□□ -0.72
COPB1-201ENST00000249923 MRPS5P82675 430 aaKnown RBP10.54□□□□□ -0.72
COPB1-201ENST00000249923 CDO1Q16878 200 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 CCDC14Q49A88 953 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 ZNF667Q5HYK9 610 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 ANKRD20A2Q5SQ80 823 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 ANKRD20A1Q5TYW2 823 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 ANKRD20A3Q5VUR7 823 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 PLPPR4Q7Z2D5 763 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 ZBTB8OSQ8IWT0 167 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 CCDC33Q8N5R6 958 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 LINC01465Q8N7H1 131 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 RSAD2Q8WXG1 361 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 ANKRD36BP1Q96IX9 119 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 SPATA33Q96N06 139 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 ZNF395Q9H8N7 513 aaPredicted RBP10.54□□□□□ -0.72
COPB1-201ENST00000249923 ARHGEF4Q9NR80 690 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 CITO14578 2027 aa10.54□□□□□ -0.72
COPB1-201ENST00000249923 TRAFD1O14545 582 aaPredicted RBP10.53□□□□□ -0.72
COPB1-201ENST00000249923 ENTPD5O75356 428 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 ZWINTO95229 277 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 TNNC2P02585 160 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 DLDP09622 509 aaKnown RBP10.53□□□□□ -0.72
COPB1-201ENST00000249923 ALDH3A1P30838 453 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 POLR2BP30876 1174 aaKnown RBP10.53□□□□□ -0.72
COPB1-201ENST00000249923 ATXN1P54253 815 aaKnown RBP10.53□□□□□ -0.72
COPB1-201ENST00000249923 RBBP5Q15291 538 aaKnown RBP10.53□□□□□ -0.72
COPB1-201ENST00000249923 PARP6Q2NL67 630 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 TMEM154Q6P9G4 183 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 C1orf228Q6PIY5 440 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 SLC44A1Q8WWI5 657 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 RXFP2Q8WXD0 754 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 PTCD3Q96EY7 689 aaKnown RBP10.53□□□□□ -0.72
COPB1-201ENST00000249923 MECRQ9BV79 373 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 MAF1Q9H063 256 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 DENND2DQ9H6A0 471 aaPredicted RBP10.53□□□□□ -0.72
COPB1-201ENST00000249923 RNF19AQ9NV58 838 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 RBPJLQ9UBG7 517 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 A0A087WZ62 844 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 ADM5C9JUS6 153 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 HMGCRP04035 888 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 UBTFL6P0CB48 400 aaPredicted RBP10.53□□□□□ -0.72
COPB1-201ENST00000249923 CCND1P24385 295 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 RANBP1P43487 201 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 NDST1P52848 882 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 PMF1Q6P1K2 205 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 MAMDC4Q6UXC1 1216 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 TTC30AQ86WT1 665 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 PCDH19Q8TAB3 1148 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 FAM111AQ96PZ2 611 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 DDX50Q9BQ39 737 aaKnown RBP10.53□□□□□ -0.72
COPB1-201ENST00000249923 FDXACB1Q9BRP7 624 aaPredicted RBP10.53□□□□□ -0.72
COPB1-201ENST00000249923 C20orf27Q9GZN8 174 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 POPDC2Q9HBU9 364 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 ARL8BQ9NVJ2 186 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 HTTP42858 3142 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 PPP1R12AO14974 1030 aaPredicted RBP10.53□□□□□ -0.72
COPB1-201ENST00000249923 PYGBP11216 843 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 ARF4P18085 180 aaPredicted RBP10.53□□□□□ -0.72
COPB1-201ENST00000249923 CDH6P55285 790 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 IGBP1P78318 339 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 SLC18A2Q05940 514 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 INCA1Q0VD86 236 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 SLC10A2Q12908 348 aaPredicted RBP10.53□□□□□ -0.72
COPB1-201ENST00000249923 PTK7Q13308 1070 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 PRKD1Q15139 912 aaPredicted RBP10.53□□□□□ -0.72
COPB1-201ENST00000249923 TSNAXIP1Q2TAA8 658 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 OLFML1Q6UWY5 402 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 CEP128Q6ZU80 1094 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 PCGF5Q86SE9 256 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 MPP5Q8N3R9 675 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 SLC16A10Q8TF71 515 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 SKA1Q96BD8 255 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 B3GNT5Q9BYG0 378 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 TLE6Q9H808 572 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.53□□□□□ -0.72
COPB1-201ENST00000249923 TSPAN16Q9UKR8 245 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 MFHAS1Q9Y4C4 1052 aa10.53□□□□□ -0.72
COPB1-201ENST00000249923 VTNP04004 478 aa10.52□□□□□ -0.72
COPB1-201ENST00000249923 KITP10721 976 aa10.52□□□□□ -0.72
COPB1-201ENST00000249923 GNAT1P11488 350 aa10.52□□□□□ -0.72
COPB1-201ENST00000249923 BGNP21810 368 aa10.52□□□□□ -0.72
COPB1-201ENST00000249923 RBL1P28749 1068 aa10.52□□□□□ -0.72
COPB1-201ENST00000249923 GRIA1P42261 906 aa10.52□□□□□ -0.72
COPB1-201ENST00000249923 RGS7P49802 495 aa10.52□□□□□ -0.72
COPB1-201ENST00000249923 CCNG1P51959 295 aa10.52□□□□□ -0.72
COPB1-201ENST00000249923 PKDCCQ504Y2 493 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms