RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 SAE1Q9UBE0 346 aaPredicted RBP24.42■■□□□ 1.5
SYNGR3-201ENST00000248121 PCDHB7Q9Y5E2 793 aa24.42■■□□□ 1.5
SYNGR3-201ENST00000248121 COL4A6Q14031 1691 aa24.42■■□□□ 1.5
SYNGR3-201ENST00000248121 TRIM43BA6NCK2 446 aa24.42■■□□□ 1.5
SYNGR3-201ENST00000248121 PAQR9Q6ZVX9 377 aa24.42■■□□□ 1.5
SYNGR3-201ENST00000248121 FUKQ8N0W3 1084 aa24.42■■□□□ 1.5
SYNGR3-201ENST00000248121 FAM76AQ8TAV0 307 aa24.42■■□□□ 1.5
SYNGR3-201ENST00000248121 TRIM43Q96BQ3 446 aaPredicted RBP24.42■■□□□ 1.5
SYNGR3-201ENST00000248121 SEMA4AQ9H3S1 761 aa24.42■■□□□ 1.5
SYNGR3-201ENST00000248121 PRG3Q9Y2Y8 225 aaPredicted RBP24.42■■□□□ 1.5
SYNGR3-201ENST00000248121 ENDOD1O94919 500 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 ITGA8P53708 1063 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 ATP11AP98196 1134 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 BBS12Q6ZW61 710 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 ZDHHC17Q8IUH5 632 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 SLC35B2Q8TB61 432 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 URGCPQ8TCY9 931 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 RSPH1Q8WYR4 309 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 NKD2Q969F2 451 aaPredicted RBP24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 HNRNPABQ99729 332 aaKnown RBP24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 ELAC1Q9H777 363 aaKnown RBP24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 CST8O60676 142 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 ATF2P15336 505 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 TFE3P19532 575 aaPredicted RBP24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 CHKAP35790 457 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 ADCY8P40145 1251 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 OR1G1P47890 313 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 ARSEP51690 589 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 RABGGTBP53611 331 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 VCPP55072 806 aaKnown RBP24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 DYNLT1P63172 113 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 RNASELQ05823 741 aaKnown RBP24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 MDH1BQ5I0G3 518 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 ZNF365Q70YC5 407 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 ALLCQ8N6M5 410 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 KCTD6Q8NC69 237 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 ADAM33Q9BZ11 813 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 PRDM5Q9NQX1 630 aaPredicted RBP24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 DRG1Q9Y295 367 aaKnown RBP24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 LAMA2P24043 3122 aaKnown RBP24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 NLRC5Q86WI3 1866 aa24.41■■□□□ 1.5
SYNGR3-201ENST00000248121 FAM163BP0C2L3 166 aa24.4■■□□□ 1.5
SYNGR3-201ENST00000248121 PTPN1P18031 435 aaKnown RBP24.4■■□□□ 1.5
SYNGR3-201ENST00000248121 TMCO2Q7Z6W1 182 aaPredicted RBP24.4■■□□□ 1.5
SYNGR3-201ENST00000248121 TMEM209Q96SK2 561 aa24.4■■□□□ 1.5
SYNGR3-201ENST00000248121 NRDE2Q9H7Z3 1164 aa24.4■■□□□ 1.5
SYNGR3-201ENST00000248121 ZNF148Q9UQR1 794 aa24.4■■□□□ 1.5
SYNGR3-201ENST00000248121 BEST1O76090 585 aa24.39■■□□□ 1.5
SYNGR3-201ENST00000248121 SHBGP04278 402 aa24.39■■□□□ 1.5
SYNGR3-201ENST00000248121 ZSCAN5DPP0CG00 497 aa24.39■■□□□ 1.5
SYNGR3-201ENST00000248121 LCP1P13796 627 aa24.39■■□□□ 1.5
SYNGR3-201ENST00000248121 PBX3P40426 434 aa24.39■■□□□ 1.5
SYNGR3-201ENST00000248121 LMAN1P49257 510 aa24.39■■□□□ 1.5
SYNGR3-201ENST00000248121 BCAR1P56945 870 aa24.39■■□□□ 1.5
SYNGR3-201ENST00000248121 SLC26A9Q7LBE3 791 aa24.39■■□□□ 1.5
SYNGR3-201ENST00000248121 CCDC89Q8N998 374 aa24.39■■□□□ 1.5
SYNGR3-201ENST00000248121 ACTL9Q8TC94 416 aa24.39■■□□□ 1.5
SYNGR3-201ENST00000248121 FAM172AQ8WUF8 416 aa24.39■■□□□ 1.5
SYNGR3-201ENST00000248121 ATP6V1G3Q96LB4 118 aa24.39■■□□□ 1.5
SYNGR3-201ENST00000248121 UROC1Q96N76 676 aa24.39■■□□□ 1.5
SYNGR3-201ENST00000248121 SYT15Q9BQS2 421 aa24.39■■□□□ 1.5
SYNGR3-201ENST00000248121 C11orf84Q9BUA3 381 aaPredicted RBP24.39■■□□□ 1.5
SYNGR3-201ENST00000248121 CYLDQ9NQC7 956 aa24.39■■□□□ 1.5
SYNGR3-201ENST00000248121 PTPRSQ13332 1948 aa24.39■■□□□ 1.5
SYNGR3-201ENST00000248121 MYBPHLA2RUH7 354 aa24.39■■□□□ 1.49
SYNGR3-201ENST00000248121 M0QZQ0 153 aa24.39■■□□□ 1.49
SYNGR3-201ENST00000248121 NUDT17P0C025 328 aa24.39■■□□□ 1.49
SYNGR3-201ENST00000248121 RARGP13631 454 aa24.39■■□□□ 1.49
SYNGR3-201ENST00000248121 ETS1P14921 441 aa24.39■■□□□ 1.49
SYNGR3-201ENST00000248121 SDC4P31431 198 aa24.39■■□□□ 1.49
SYNGR3-201ENST00000248121 SNX16P57768 344 aa24.39■■□□□ 1.49
SYNGR3-201ENST00000248121 MMRN1Q13201 1228 aa24.39■■□□□ 1.49
SYNGR3-201ENST00000248121 GLIPR1L2Q4G1C9 344 aa24.39■■□□□ 1.49
SYNGR3-201ENST00000248121 GSTA5Q7RTV2 222 aa24.39■■□□□ 1.49
SYNGR3-201ENST00000248121 HSFY1Q96LI6 401 aa24.39■■□□□ 1.49
SYNGR3-201ENST00000248121 NGRNQ9NPE2 291 aaKnown RBP24.39■■□□□ 1.49
SYNGR3-201ENST00000248121 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.39■■□□□ 1.49
SYNGR3-201ENST00000248121 TMEM30AQ9NV96 361 aa24.39■■□□□ 1.49
SYNGR3-201ENST00000248121 LRFN2Q9ULH4 789 aa24.39■■□□□ 1.49
SYNGR3-201ENST00000248121 PTPRDP23468 1912 aa24.39■■□□□ 1.49
SYNGR3-201ENST00000248121 UPP2O95045 317 aa24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 ODC1P11926 461 aa24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 HDAC4P56524 1084 aa24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 OTUD4Q01804 1114 aaKnown RBP24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 LMNB2Q03252 620 aa24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 DCLRE1AQ6PJP8 1040 aa24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 PIGZQ86VD9 579 aa24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 ABI1Q8IZP0 508 aa24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 TMEM86AQ8N2M4 240 aa24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 TMEM121Q9BTD3 319 aa24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 DUSP16Q9BY84 665 aa24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 RHOBTB2Q9BYZ6 727 aa24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 XPO1O14980 1071 aaKnown RBP24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 PRPSAP2O60256 369 aa24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 ITGAVP06756 1048 aa24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 SLC29A2Q14542 456 aa24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 SLMAPQ14BN4 828 aa24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 OR10T2Q8NGX3 314 aa24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 SUSD3Q96L08 255 aa24.38■■□□□ 1.49
SYNGR3-201ENST00000248121 PWWP2AQ96N64 755 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms