RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 FAM71BQ8TC56 605 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 C2orf15Q8WU43 125 aaKnown RBP14.84□□□□□ -0.03
SDF2-201ENST00000247020 RAPGEF5Q92565 580 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 RNF25Q96BH1 459 aaPredicted RBP14.84□□□□□ -0.03
SDF2-201ENST00000247020 ZNF689Q96CS4 500 aaPredicted RBP14.84□□□□□ -0.03
SDF2-201ENST00000247020 ULBP1Q9BZM6 244 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 FAM129AQ9BZQ8 928 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 DCLK3Q9C098 648 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 ZWILCHQ9H900 591 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 TMLHEQ9NVH6 421 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 TMEM51Q9NW97 253 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 USP3Q9Y6I4 520 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 TRIM66O15016 1216 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 TTI1O43156 1089 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 EFEMP2O95967 443 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 RAG1P15918 1043 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 PTGIRP43119 386 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 AIF1P55008 147 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 HDAC4P56524 1084 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 ATP11AP98196 1134 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 CDO1Q16878 200 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 CTXN3Q4LDR2 81 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 ANKS3Q6ZW76 656 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 CYP4V2Q6ZWL3 525 aaPredicted RBP14.83□□□□□ -0.04
SDF2-201ENST00000247020 JAMLQ86YT9 394 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 CCDC105Q8IYK2 499 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 DEFB106AQ8N104 65 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 KCTD6Q8NC69 237 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 AENQ8WTP8 325 aaKnown RBP14.83□□□□□ -0.04
SDF2-201ENST00000247020 FAM149B1Q96BN6 582 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 PGAP3Q96FM1 320 aaPredicted RBP14.83□□□□□ -0.04
SDF2-201ENST00000247020 TMEM209Q96SK2 561 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 KCNK16Q96T55 309 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 NPY6RQ99463 290 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 ERP44Q9BS26 406 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 GPR62Q9BZJ7 368 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 PRDM16Q9HAZ2 1276 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 NGRNQ9NPE2 291 aaKnown RBP14.83□□□□□ -0.04
SDF2-201ENST00000247020 TMEM30AQ9NV96 361 aa14.83□□□□□ -0.04
SDF2-201ENST00000247020 TRIM43BA6NCK2 446 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 PI4K2BG5E9Z4 385 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 TBC1D4O60343 1298 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 ECEL1O95672 775 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 LTFP02788 710 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 ALDH7A1P49419 539 aaKnown RBP14.82□□□□□ -0.04
SDF2-201ENST00000247020 ARSEP51690 589 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 CACNA2D1P54289 1103 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 BCAR1P56945 870 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 SLC39A12Q504Y0 691 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 ERMARDQ5T6L9 678 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 TTC27Q6P3X3 843 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 BBS12Q6ZW61 710 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 CMTR2Q8IYT2 770 aaKnown RBP14.82□□□□□ -0.04
SDF2-201ENST00000247020 ATL2Q8NHH9 583 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 TRIM43Q96BQ3 446 aaPredicted RBP14.82□□□□□ -0.04
SDF2-201ENST00000247020 C8orf48Q96LL4 319 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 PEBP4Q96S96 227 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 SLC9A7Q96T83 725 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 HERPUD2Q9BSE4 406 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 CWH43Q9H720 699 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 RC3H2Q9HBD1 1191 aaKnown RBP14.82□□□□□ -0.04
SDF2-201ENST00000247020 PCSK1NQ9UHG2 260 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 PCDHB5Q9Y5E4 795 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 PTPRSQ13332 1948 aa14.82□□□□□ -0.04
SDF2-201ENST00000247020 ALPK3Q96L96 1907 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 ZMYND10O75800 440 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 NDUFV1P49821 464 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 SULT1E1P49888 294 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 TFDP2Q14188 446 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 SMTNL2Q2TAL5 461 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 KCNT1Q5JUK3 1230 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 SH3PXD2AQ5TCZ1 1133 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 DUPD1Q68J44 220 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 GPRIN1Q7Z2K8 1008 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 HDXQ7Z353 690 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 RNF168Q8IYW5 571 aaPredicted RBP14.81□□□□□ -0.04
SDF2-201ENST00000247020 SPPL2BQ8TCT7 592 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 CASKIN2Q8WXE0 1202 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 CAVIN3Q969G5 261 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 ZNF670Q9BS34 389 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 TTPALQ9BTX7 342 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 HEMGNQ9BXL5 484 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 KLHL11Q9NVR0 708 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 ZNF446Q9NWS9 450 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 DRG1Q9Y295 367 aaKnown RBP14.81□□□□□ -0.04
SDF2-201ENST00000247020 KIAA1671Q9BY89 1806 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 CAPN9O14815 690 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 GAS8O95995 478 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 F9P00740 461 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 MYBL2P10244 700 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 RDXP35241 583 aaKnown RBP14.81□□□□□ -0.04
SDF2-201ENST00000247020 GRIK1P39086 918 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 CDH6P55285 790 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 GPR17Q13304 367 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 DPYSL2Q16555 572 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 USP41Q3LFD5 358 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 DCAF6Q58WW2 860 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 BHLHA9Q7RTU4 235 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 ANKS1BQ7Z6G8 1248 aa14.81□□□□□ -0.04
SDF2-201ENST00000247020 UBE2Q1Q7Z7E8 422 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms