RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 ZNF410Q86VK4 478 aa18.11■□□□□ 0.49
LRFN3-201ENST00000246529 FAM228AQ86W67 206 aa18.11■□□□□ 0.49
LRFN3-201ENST00000246529 NPLOC4Q8TAT6 608 aa18.11■□□□□ 0.49
LRFN3-201ENST00000246529 DCAKDQ8WVC6 231 aa18.11■□□□□ 0.49
LRFN3-201ENST00000246529 FAF2Q96CS3 445 aa18.11■□□□□ 0.49
LRFN3-201ENST00000246529 TRIM33Q9UPN9 1127 aa18.11■□□□□ 0.49
LRFN3-201ENST00000246529 KBTBD13C9JR72 458 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 GPR32O75388 356 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 HDAC4P56524 1084 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 TFDP2Q14188 446 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 HIC1Q14526 733 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 DCAF4L1Q3SXM0 396 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 ZNF618Q5T7W0 954 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 ADGRD1Q6QNK2 874 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 SESTD1Q86VW0 696 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 KIF2BQ8N4N8 673 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 MZB1Q8WU39 189 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 DHRS4Q9BTZ2 278 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 SLC4A5Q9BY07 1137 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 PLXNA1Q9UIW2 1896 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 DYNC1LI2O43237 492 aaPredicted RBP18.1■□□□□ 0.49
LRFN3-201ENST00000246529 LMO2P25791 158 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 STIP1P31948 543 aaKnown RBP18.1■□□□□ 0.49
LRFN3-201ENST00000246529 RDXP35241 583 aaKnown RBP18.1■□□□□ 0.49
LRFN3-201ENST00000246529 MSH2P43246 934 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 KCNJ11Q14654 390 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 FAM47CQ5HY64 1035 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 HHATQ5VTY9 493 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 SLC27A1Q6PCB7 646 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 TMEM110Q86TL2 294 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 NT5DC4Q86YG4 428 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 SENP1Q9P0U3 644 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 KLHL14Q9P2G3 628 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 PLXNB2O15031 1838 aa18.1■□□□□ 0.49
LRFN3-201ENST00000246529 A8MXQ7 604 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 STRNO43815 780 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 RECQL4O94761 1208 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 ADRA1DP25100 572 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 BCAR1P56945 870 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 BNIP1Q12981 228 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 ZBTB6Q15916 424 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 PDK4Q16654 411 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 TINF2Q9BSI4 451 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 GOLGA2P5Q9HBQ8 144 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 SLC17A7Q9P2U7 560 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 HESX1Q9UBX0 185 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 TCRBV9S1A1TA0A576 114 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 APOL1O14791 398 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 SPTLC1O15269 473 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 LCP1P13796 627 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 YWHAGP61981 247 aaKnown RBP eCLIP18.09■□□□□ 0.49
LRFN3-201ENST00000246529 KLHL38Q2WGJ6 581 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 C9orf57Q5W0N0 161 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 PRPF39Q86UA1 669 aaKnown RBP18.09■□□□□ 0.49
LRFN3-201ENST00000246529 PNMA8AQ86V59 439 aaPredicted RBP18.09■□□□□ 0.49
LRFN3-201ENST00000246529 LRRC8CQ8TDW0 803 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 CFAP36Q96G28 342 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 SYT17Q9BSW7 474 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 GCOM2Q9BZD3 368 aaPredicted RBP18.09■□□□□ 0.49
LRFN3-201ENST00000246529 RXFP1Q9HBX9 757 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 ALG13Q9NP73 1137 aaKnown RBP18.09■□□□□ 0.49
LRFN3-201ENST00000246529 CLEC11AQ9Y240 323 aa18.09■□□□□ 0.49
LRFN3-201ENST00000246529 DPYSL4O14531 572 aa18.08■□□□□ 0.49
LRFN3-201ENST00000246529 SMIM10L2AP0DMW4 78 aa18.08■□□□□ 0.49
LRFN3-201ENST00000246529 SMIM10L2BP0DMW5 78 aa18.08■□□□□ 0.49
LRFN3-201ENST00000246529 RASA2Q15283 850 aa18.08■□□□□ 0.49
LRFN3-201ENST00000246529 SNCBQ16143 134 aa18.08■□□□□ 0.49
LRFN3-201ENST00000246529 KBTBD12Q3ZCT8 623 aa18.08■□□□□ 0.49
LRFN3-201ENST00000246529 BOLA3Q53S33 107 aa18.08■□□□□ 0.49
LRFN3-201ENST00000246529 ZNF467Q7Z7K2 595 aaPredicted RBP18.08■□□□□ 0.49
LRFN3-201ENST00000246529 MAP7D3Q8IWC1 876 aa18.08■□□□□ 0.49
LRFN3-201ENST00000246529 CCDC110Q8TBZ0 833 aa18.08■□□□□ 0.49
LRFN3-201ENST00000246529 GTF3C2Q8WUA4 911 aaPredicted RBP18.08■□□□□ 0.49
LRFN3-201ENST00000246529 TMEM40Q8WWA1 233 aa18.08■□□□□ 0.49
LRFN3-201ENST00000246529 PHACTR1Q9C0D0 580 aa18.08■□□□□ 0.49
LRFN3-201ENST00000246529 RNF39Q9H2S5 420 aa18.08■□□□□ 0.49
LRFN3-201ENST00000246529 NR2E3Q9Y5X4 410 aa18.08■□□□□ 0.49
LRFN3-201ENST00000246529 CITO14578 2027 aa18.08■□□□□ 0.48
LRFN3-201ENST00000246529 FAM155BO75949 473 aa18.08■□□□□ 0.48
LRFN3-201ENST00000246529 GRB14Q14449 540 aa18.08■□□□□ 0.48
LRFN3-201ENST00000246529 PDK2Q15119 407 aa18.08■□□□□ 0.48
LRFN3-201ENST00000246529 STILQ15468 1287 aa18.08■□□□□ 0.48
LRFN3-201ENST00000246529 TTC39CQ8N584 583 aa18.08■□□□□ 0.48
LRFN3-201ENST00000246529 BEST2Q8NFU1 509 aa18.08■□□□□ 0.48
LRFN3-201ENST00000246529 TCP10LQ8TDR4 215 aa18.08■□□□□ 0.48
LRFN3-201ENST00000246529 TRIM6Q9C030 488 aaPredicted RBP18.08■□□□□ 0.48
LRFN3-201ENST00000246529 PLEKHA5Q9HAU0 1116 aa18.08■□□□□ 0.48
LRFN3-201ENST00000246529 TEX264Q9Y6I9 313 aa18.08■□□□□ 0.48
LRFN3-201ENST00000246529 TRIP11Q15643 1979 aa18.08■□□□□ 0.48
LRFN3-201ENST00000246529 IGF2BP3O00425 579 aaKnown RBP eCLIP18.07■□□□□ 0.48
LRFN3-201ENST00000246529 MGRN1O60291 552 aa18.07■□□□□ 0.48
LRFN3-201ENST00000246529 ZBED1O96006 694 aa18.07■□□□□ 0.48
LRFN3-201ENST00000246529 HOXD8P13378 290 aaPredicted RBP18.07■□□□□ 0.48
LRFN3-201ENST00000246529 SLC18A1P54219 525 aa18.07■□□□□ 0.48
LRFN3-201ENST00000246529 ZNF200P98182 395 aaPredicted RBP18.07■□□□□ 0.48
LRFN3-201ENST00000246529 GBE1Q04446 702 aa18.07■□□□□ 0.48
LRFN3-201ENST00000246529 RNF43Q68DV7 783 aa18.07■□□□□ 0.48
LRFN3-201ENST00000246529 KBTBD7Q8WVZ9 684 aa18.07■□□□□ 0.48
LRFN3-201ENST00000246529 NDRG1Q92597 394 aaKnown RBP18.07■□□□□ 0.48
LRFN3-201ENST00000246529 TRIM56Q9BRZ2 755 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms