RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 CAPN1P07384 714 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 MMP10P09238 476 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 SPRP35270 261 aaPredicted RBP7.76□□□□□ -1.17
RIF1-201ENST00000243326 PTDSS1P48651 473 aaKnown RBP7.76□□□□□ -1.17
RIF1-201ENST00000243326 IL17AQ16552 155 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 CYP51A1Q16850 503 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 PREX2Q70Z35 1606 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 C9JVG2 144 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 CPB1P15086 417 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 DDX53Q86TM3 631 aaKnown RBP7.76□□□□□ -1.17
RIF1-201ENST00000243326 DNAJC1Q96KC8 554 aaKnown RBP7.76□□□□□ -1.17
RIF1-201ENST00000243326 LATS2Q9NRM7 1088 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 GPRC5DQ9NZD1 345 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 PRR12Q9ULL5 1215 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 TYW5A2RUC4 315 aaKnown RBP7.76□□□□□ -1.17
RIF1-201ENST00000243326 TMEM247A6NEH6 219 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 CFAP99D6REC4 459 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 SUPT7LO94864 414 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 ARIH2O95376 493 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 CYP4B1P13584 511 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 GRK3P35626 688 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 RFX5P48382 616 aaPredicted RBP7.76□□□□□ -1.17
RIF1-201ENST00000243326 KCNK10P57789 538 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 CDC16Q13042 620 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 PDK3Q15120 406 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 TLK2Q86UE8 772 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 FAM160B2Q86V87 743 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 JADE3Q92613 823 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 ASIC4Q96FT7 647 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 DCLK3Q9C098 648 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 LMCD1Q9NZU5 365 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 SPATA2Q9UM82 520 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 SATB2Q9UPW6 733 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 ZNF263O14978 683 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 PSMA4P25789 261 aaKnown RBP7.76□□□□□ -1.17
RIF1-201ENST00000243326 ALCAMQ13740 583 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 ABCB10Q9NRK6 738 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.76□□□□□ -1.17
RIF1-201ENST00000243326 DNPEPQ9ULA0 475 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 C21orf59P57076 290 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 GIT2Q14161 759 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 EPHA7Q15375 998 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 SEPT5Q99719 369 aaPredicted RBP7.76□□□□□ -1.17
RIF1-201ENST00000243326 DOCK10Q96BY6 2186 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 PHGDHO43175 533 aaKnown RBP7.76□□□□□ -1.17
RIF1-201ENST00000243326 NDUFS3O75489 264 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 UTP15Q8TED0 518 aaKnown RBP7.76□□□□□ -1.17
RIF1-201ENST00000243326 SPOCK2Q92563 424 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 CAVIN3Q969G5 261 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 ERVK-10P10266 1014 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 NCAM1P13591 858 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 HIRAP54198 1017 aaPredicted RBP7.76□□□□□ -1.17
RIF1-201ENST00000243326 CREG2Q8IUH2 290 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 TMEM39BQ9GZU3 492 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 PTK2BQ14289 1009 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 CSHL1Q14406 222 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 STK32CQ86UX6 486 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 SLC41A1Q8IVJ1 513 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 ROPN1BQ9BZX4 212 aaPredicted RBP7.76□□□□□ -1.17
RIF1-201ENST00000243326 ELP3Q9H9T3 547 aa7.76□□□□□ -1.17
RIF1-201ENST00000243326 ROPN1Q9HAT0 212 aaPredicted RBP7.76□□□□□ -1.17
RIF1-201ENST00000243326 PCNAP12004 261 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 MCL1Q07820 350 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 CUL2Q13617 745 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 CNGA2Q16280 664 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 PKN1Q16512 942 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 MTA3Q9BTC8 594 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 DAGLAQ9Y4D2 1042 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 HS6ST1O60243 411 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 FSBPO95073 299 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 DLG4P78352 724 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 Q4G0T1 1027 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 SLC10A5Q5PT55 438 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 SCFD1Q8WVM8 642 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 TBX20Q9UMR3 447 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 CLCA2Q9UQC9 943 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 CROCC2H7BZ55 1655 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 FOSL2P15408 326 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 SCNN1BP51168 640 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 NFIXQ14938 502 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 RNF145Q96MT1 663 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 ZNF556Q9HAH1 456 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 UVRAGQ9P2Y5 699 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 E9PCH4 1651 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 PIK3CDO00329 1044 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 ZNF57Q68EA5 555 aaPredicted RBP7.75□□□□□ -1.17
RIF1-201ENST00000243326 ERGIC2Q96RQ1 377 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 MMP19Q99542 508 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 CLOCKO15516 846 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 TRAPPC3O43617 180 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 ANPEPP15144 967 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 CASP5P51878 434 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 R3HDM1Q15032 1099 aaKnown RBP7.75□□□□□ -1.17
RIF1-201ENST00000243326 PTRHD1Q6GMV3 140 aaKnown RBP7.75□□□□□ -1.17
RIF1-201ENST00000243326 EDEM1Q92611 657 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 SENP1Q9P0U3 644 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 KCNG1Q9UIX4 513 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 RAB21Q9UL25 225 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 RALBP11234 206 aa7.75□□□□□ -1.17
RIF1-201ENST00000243326 MYL6P60660 151 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms