RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 PLA2G4AP47712 749 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 GPR15P49685 360 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 PTPN20Q4JDL3 420 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 E4F1Q66K89 784 aaPredicted RBP11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 GET4Q7L5D6 327 aaPredicted RBP11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 DNAAF5Q86Y56 855 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 RNF10Q8N5U6 811 aaKnown RBP11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 EMC1Q8N766 993 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 PCDHB18PQ96TA0 734 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 TAS2R14Q9NYV8 317 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 GMIPQ9P107 970 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 CNTN6Q9UQ52 1028 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 HCFC2Q9Y5Z7 792 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 TLR5O60602 858 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 CYBBP04839 570 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 LRIT3Q3SXY7 679 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 GPR158Q5T848 1215 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 RWDD4Q6NW29 188 aaKnown RBP11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 SCAMP5Q8TAC9 235 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 HSPH1Q92598 858 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 WDCPQ9H6R7 721 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 MARCH2Q9P0N8 246 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 PCDHGC5Q9Y5F6 944 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 WDR81Q562E7 1941 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 CLASP2O75122 1294 aaKnown RBP11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 ZMYND10O75800 440 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 CCZ1BP86790 482 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 CCZ1P86791 482 aaPredicted RBP11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 CCDC142Q17RM4 750 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 PPP6R3Q5H9R7 873 aaPredicted RBP11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 C12orf76Q8N812 135 aaPredicted RBP11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 MAB21L3Q8N8X9 362 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 ATP6V0D2Q8N8Y2 350 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 SLC22A17Q8WUG5 538 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 SERPINB11Q96P15 392 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 CALN1Q9BXU9 219 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 RXFP1Q9HBX9 757 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 PNPLA8Q9NP80 782 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 DONSONQ9NYP3 566 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 DNMT3LQ9UJW3 386 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 PYCARDQ9ULZ3 195 aa11.64□□□□□ -0.55
TNFAIP3-201ENST00000237289 GOLGA6L10A0A0M3HER8 536 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 KRT7P08729 469 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 MMP8P22894 467 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 TNNT3P45378 269 aaPredicted RBP11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 SLC11A2P49281 568 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 HGSNATQ68CP4 663 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 CXorf38Q8TB03 319 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 PACSIN1Q9BY11 444 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 COMMD8Q9NX08 183 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 MYO7AQ13402 2215 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 TMEM265A0A087WTH1 108 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 A0A1W2PQH9 124 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 GLI1P08151 1106 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 HOXB8P17481 243 aaPredicted RBP11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 NOS2P35228 1153 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 ACTN2P35609 894 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 IRGQQ8WZA9 623 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 CNPY3Q9BT09 278 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 THG1LQ9NWX6 298 aaKnown RBP11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 LRRD1A4D1F6 860 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 C5orf67F2Z3F1 127 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 RFPL2O75678 378 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 ERBB2P04626 1255 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 SP100P23497 879 aaPredicted RBP11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 SLC1A1P43005 524 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 MTMR3Q13615 1198 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 GRASPQ7Z6J2 395 aaPredicted RBP11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 UNC45BQ8IWX7 931 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 SLC35F5Q8WV83 523 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 DHX35Q9H5Z1 703 aaKnown RBP11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 PCNTO95613 3336 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 KRT1P04264 644 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 CYP1A1P04798 512 aaPredicted RBP11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 CHRNB2P17787 502 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 TBX4P57082 545 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 MRPL58Q14197 206 aaKnown RBP11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 KCTD13Q8WZ19 329 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 PSMB7Q99436 277 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 NAPGQ99747 312 aaPredicted RBP11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 UBXN6Q9BZV1 441 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 AVENQ9NQS1 362 aaPredicted RBP11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 TMEM51Q9NW97 253 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 ZDHHC7Q9NXF8 308 aa11.63□□□□□ -0.55
TNFAIP3-201ENST00000237289 SIGLEC16A6NMB1 481 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 CREB3O43889 395 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 RTL10Q7L3V2 364 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 FAM172AQ8WUF8 416 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 NSMCE1Q8WV22 266 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 GPR88Q9GZN0 384 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 RC3H2Q9HBD1 1191 aaKnown RBP11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 SCN5AQ14524 2016 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 A0A1W2PRU2 124 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 PALMO75781 387 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 FTCDO95954 541 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 KCNA5P22460 613 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 MTHFRP42898 656 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 SYT10Q6XYQ8 523 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 ING5Q8WYH8 240 aa11.62□□□□□ -0.55
TNFAIP3-201ENST00000237289 NDRG1Q92597 394 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms