RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 KDELR1P24390 212 aa20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 SNRPFP62306 86 aaKnown RBP20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 MRPS5P82675 430 aaKnown RBP20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 CC2D2BQ6DHV5 1058 aa20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 RBM44Q6ZP01 1051 aaKnown RBP20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 WDR75Q8IWA0 830 aaKnown RBP20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 ICA1LQ8NDH6 482 aa20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 GRIP2Q9C0E4 1043 aa20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 ST6GALNAC4Q9H4F1 302 aa20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 XAB2Q9HCS7 855 aaKnown RBP20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 MAN1C1Q9NR34 630 aa20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 LRCH4O75427 683 aa20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 ROR1Q01973 937 aa20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 R3HDM1Q15032 1099 aaKnown RBP20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 LGSNQ5TDP6 509 aa20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 ARHGEF16Q5VV41 709 aa20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 DPY19L2Q6NUT2 758 aa20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 TRMT10BQ6PF06 316 aaKnown RBP20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 ACAD11Q709F0 780 aa20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 RNF148Q8N7C7 305 aa20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 FAM172AQ8WUF8 416 aa20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 CNBD2Q96M20 576 aa20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 IDI2Q9BXS1 227 aa20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 TBC1D22BQ9NU19 505 aa20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 DDX43Q9NXZ2 648 aaKnown RBP20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 FBXO40Q9UH90 709 aa20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 HBS1LQ9Y450 684 aaKnown RBP20.86■□□□□ 0.93
PPP1R3F-201ENST00000055335 ADCY3O60266 1144 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 UQCRBP14927 111 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 STIP1P31948 543 aaKnown RBP20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 CDH6P55285 790 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 SESTD1Q86VW0 696 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 PDSS2Q86YH6 399 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 KIAA0319LQ8IZA0 1049 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 COPAP53621 1224 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 MYL6P60660 151 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 SLC18A2Q05940 514 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 TAS1R3Q7RTX0 852 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 TFAP2BQ92481 460 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 CNTN3Q9P232 1028 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 K7ERI5 159 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 BUD23O43709 281 aaKnown RBP20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 FKBP6O75344 327 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 RAD17O75943 681 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 KRT19P08727 400 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 COG7P83436 770 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 TFAMQ00059 246 aaKnown RBP20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 LSAMPQ13449 338 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 GALNT4Q8N4A0 578 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 ACSS2Q9NR19 701 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 ADAMTSL1Q8N6G6 1762 aa20.85■□□□□ 0.93
PPP1R3F-201ENST00000055335 RGL2O15211 777 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 FOLH1Q04609 750 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 CCDC142Q17RM4 750 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 TRIM74Q86UV6 250 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 TRIM73Q86UV7 250 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 UNC5BQ8IZJ1 945 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 DTNBP1Q96EV8 351 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 CCDC106Q9BWC9 280 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 MTMR12Q9C0I1 747 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 GPATCH2LQ9NWQ4 482 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 TMOD2Q9NZR1 351 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 ZNF536O15090 1300 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 CFLARO15519 480 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 MSLNQ13421 630 aaPredicted RBP20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 DEPTORQ8TB45 409 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 ITFG2Q969R8 447 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 INPP5FQ9Y2H2 1132 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 COL14A1Q05707 1796 aaKnown RBP20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 FASTKD1Q53R41 847 aaKnown RBP20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 RAB6CQ53S08 254 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 SH3PXD2AQ5TCZ1 1133 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 TRIM42Q8IWZ5 723 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 TTC13Q8NBP0 860 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 AZIN2Q96A70 460 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 RAB6CQ9H0N0 254 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 CISHQ9NSE2 258 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 PNPOQ9NVS9 261 aa20.84■□□□□ 0.93
PPP1R3F-201ENST00000055335 XIRP1Q702N8 1843 aaKnown RBP20.83■□□□□ 0.93
PPP1R3F-201ENST00000055335 C15orf38-AP3S2A0A0A6YYH1 394 aa20.83■□□□□ 0.93
PPP1R3F-201ENST00000055335 CSH1P0DML2 217 aa20.83■□□□□ 0.93
PPP1R3F-201ENST00000055335 CSH2P0DML3 217 aa20.83■□□□□ 0.93
PPP1R3F-201ENST00000055335 RAP1GAPP47736 663 aa20.83■□□□□ 0.93
PPP1R3F-201ENST00000055335 DENND1BQ6P3S1 775 aa20.83■□□□□ 0.93
PPP1R3F-201ENST00000055335 ARPINQ7Z6K5 226 aa20.83■□□□□ 0.93
PPP1R3F-201ENST00000055335 SYTL5Q8TDW5 730 aaPredicted RBP20.83■□□□□ 0.93
PPP1R3F-201ENST00000055335 ATXN7L3BQ96GX2 97 aa20.83■□□□□ 0.93
PPP1R3F-201ENST00000055335 SMYD2Q9NRG4 433 aa20.83■□□□□ 0.93
PPP1R3F-201ENST00000055335 PCDHGB4Q9UN71 923 aa20.83■□□□□ 0.93
PPP1R3F-201ENST00000055335 PCDHGB5Q9Y5G0 923 aa20.83■□□□□ 0.93
PPP1R3F-201ENST00000055335 PCDHA10Q9Y5I2 948 aa20.83■□□□□ 0.93
PPP1R3F-201ENST00000055335 KRT7P08729 469 aa20.83■□□□□ 0.92
PPP1R3F-201ENST00000055335 GARTP22102 1010 aa20.83■□□□□ 0.92
PPP1R3F-201ENST00000055335 PMLP29590 882 aa20.83■□□□□ 0.92
PPP1R3F-201ENST00000055335 HOXA10P31260 410 aaPredicted RBP20.83■□□□□ 0.92
PPP1R3F-201ENST00000055335 CRADDP78560 199 aa20.83■□□□□ 0.92
PPP1R3F-201ENST00000055335 TRPC3Q13507 836 aa20.83■□□□□ 0.92
PPP1R3F-201ENST00000055335 TTLL12Q14166 644 aaPredicted RBP20.83■□□□□ 0.92
PPP1R3F-201ENST00000055335 PSMD6Q15008 389 aa20.83■□□□□ 0.92
PPP1R3F-201ENST00000055335 SDCCAG8Q86SQ7 713 aaPredicted RBP20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms