RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 GCKP35557 465 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 KRT81Q14533 505 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 CA9Q16790 459 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 TAF1BQ53T94 588 aaPredicted RBP13.69□□□□□ -0.22
CTNS-201ENST00000046640 OR6J1Q8NGC5 347 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.69□□□□□ -0.22
CTNS-201ENST00000046640 MCRS1Q96EZ8 462 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 WDR83Q9BRX9 315 aaKnown RBP13.69□□□□□ -0.22
CTNS-201ENST00000046640 GOLGA2P5Q9HBQ8 144 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 SPON1Q9HCB6 807 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 ASNSD1Q9NWL6 643 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 SLC5A4Q9NY91 659 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 CLUHO75153 1309 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 MCF2LO15068 1137 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 ALOX15BO15296 676 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 PRPSAP2O60256 369 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 GM2AP17900 193 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 CCDC142Q17RM4 750 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 ZNF618Q5T7W0 954 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 NAIF1Q69YI7 327 aaPredicted RBP13.69□□□□□ -0.22
CTNS-201ENST00000046640 RFX8Q6ZV50 586 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 MTDHQ86UE4 582 aaKnown RBP13.69□□□□□ -0.22
CTNS-201ENST00000046640 TTC30AQ86WT1 665 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 IGDCC3Q8IVU1 814 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 PALM2Q8IXS6 379 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 SYT17Q9BSW7 474 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 NXF3Q9H4D5 531 aaKnown RBP13.69□□□□□ -0.22
CTNS-201ENST00000046640 TXLNGQ9NUQ3 528 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 LGALS13Q9UHV8 139 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 ANK1P16157 1881 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 A0A0G2JND7 137 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 C2orf71A6NGG8 1288 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 HMGCRP04035 888 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 NEFHP12036 1026 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 ZNF143P52747 638 aaPredicted RBP13.69□□□□□ -0.22
CTNS-201ENST00000046640 CCNA1P78396 465 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 PPIL6Q8IXY8 311 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 LINC01465Q8N7H1 131 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 CMASQ8NFW8 434 aaPredicted RBP13.69□□□□□ -0.22
CTNS-201ENST00000046640 NDRG1Q92597 394 aaKnown RBP13.69□□□□□ -0.22
CTNS-201ENST00000046640 NUDCD1Q96RS6 583 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 PLCD4Q9BRC7 762 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 TBC1D10AQ9BXI6 508 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 EURLQ9NYK6 297 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 WDR35Q9P2L0 1181 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 GJD2Q9UKL4 321 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 LRRC37A2A6NM11 1700 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 TCEA3O75764 348 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 ADRA1DP25100 572 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 ZNF200P98182 395 aaPredicted RBP13.68□□□□□ -0.22
CTNS-201ENST00000046640 CCDC14Q49A88 953 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 FAM13CQ8NE31 585 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 FAM172AQ8WUF8 416 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 RAB3IPQ96QF0 476 aaPredicted RBP13.68□□□□□ -0.22
CTNS-201ENST00000046640 NFKBIZQ9BYH8 718 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 YIPF3Q9GZM5 350 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 FARP1Q9Y4F1 1045 aaPredicted RBP13.68□□□□□ -0.22
CTNS-201ENST00000046640 USH1CQ9Y6N9 552 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 SCN1AP35498 2009 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 SBF1O95248 1867 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 C2CD4BA6NLJ0 364 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 ENO4A6NNW6 628 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 LCP1P13796 627 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 CCDC130P13994 396 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 CCNB1P14635 433 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 HOXA11P31270 313 aaPredicted RBP13.68□□□□□ -0.22
CTNS-201ENST00000046640 ATICP31939 592 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 PCK1P35558 622 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 CCNHP51946 323 aaPredicted RBP13.68□□□□□ -0.22
CTNS-201ENST00000046640 ARL4CP56559 192 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 DPYSL3Q14195 570 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 FAM187BQ17R55 369 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 CYP4V2Q6ZWL3 525 aaPredicted RBP13.68□□□□□ -0.22
CTNS-201ENST00000046640 OTOAQ7RTW8 1153 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 GPR142Q7Z601 462 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 NAT8LQ8N9F0 302 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 FNIP1Q8TF40 1166 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 BRI3BPQ8WY22 251 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 CYP3A43Q9HB55 503 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 CACNG4Q9UBN1 327 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 SHOC2Q9UQ13 582 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 NUMBLQ9Y6R0 609 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 TRIP11Q15643 1979 aa13.68□□□□□ -0.22
CTNS-201ENST00000046640 SYNJ2BP-COX16A0A087WUM0 186 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 APOC4-APOC2K7ER74 178 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 KCNN4O15554 427 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 APOC2P02655 101 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 MMP3P08254 477 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 LMO2P25791 158 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 ABL2P42684 1182 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 SMAD1Q15797 465 aaKnown RBP13.67□□□□□ -0.22
CTNS-201ENST00000046640 USP50Q70EL3 339 aaPredicted RBP13.67□□□□□ -0.22
CTNS-201ENST00000046640 RELL1Q8IUW5 271 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 TRIM56Q9BRZ2 755 aaKnown RBP13.67□□□□□ -0.22
CTNS-201ENST00000046640 CNPY3Q9BT09 278 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 COX16Q9P0S2 106 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 RABGEF1Q9UJ41 708 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 ITGA11Q9UKX5 1188 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 CFAP69A5D8W1 941 aa13.67□□□□□ -0.22
CTNS-201ENST00000046640 A8MXQ7 604 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms