RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 Trim61Q8JZK6 461 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Tfb1mQ8JZM0 345 aaKnown RBP13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Smyd2Q8R5A0 433 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Clptm1Q8VBZ3 664 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Lman1lQ8VCD3 505 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Pcdh18Q8VHR0 1134 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Ndfip2Q91ZP6 311 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Slc39a3Q99K24 317 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Ap2b1Q9DBG3 937 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Ddx21Q9JIK5 851 aaKnown RBP13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 PapolbQ9WVP6 641 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Pdzrn4E9PUZ9 1014 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Pagr1bF6V0H0 108 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Spin2fJ3QPU0 254 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Alkbh5Q3TSG4 395 aaKnown RBP13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Trim38Q5SZ99 471 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Aldh1a2Q62148 518 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Garem2Q6PAJ3 880 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Dzip3Q7TPV2 1204 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 SrlQ7TQ48 910 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Zbtb5Q7TQG0 670 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Echs1Q8BH95 290 aaKnown RBP13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Nudcd3Q8R1N4 363 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 TfQ921I1 697 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Ophn1Q99J31 802 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 AenQ9CZI9 336 aaKnown RBP13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Rasgrp2Q9QUG9 608 aa13.62□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Ccdc175E9PVB3 822 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Gm20721E9Q2U8 318 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Cyp2a4P15392 494 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Cyp2a5P20852 494 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Kcnj6P48542 425 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Il1rapl1P59823 695 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Rab6bP61294 208 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Msx3P70354 204 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 RenbpP82343 430 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Ubxn2bQ0KL01 331 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Pld5Q3UNN8 536 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Gm29609Q3UU56 907 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 B3gnt3Q5JCS9 372 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Mks1Q5SW45 561 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Psen2Q61144 448 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 LbpQ61805 481 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 2700097O09RikQ6PGK3 301 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Fastkd5Q7TMV3 762 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 LdhdQ7TNG8 484 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Olfr670Q7TRP3 312 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 ItpkcQ7TS72 678 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Gtf3c2Q8BL74 907 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Syt15Q8C6N3 418 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Ccdc159Q8C963 411 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Sgsm3Q8VCZ6 750 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Ddx1Q91VR5 740 aaKnown RBP13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Ascc2Q91WR3 749 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Tekt2Q922G7 430 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Nsmce3Q9CPR8 279 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 PompQ9CQT5 141 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Mageb3Q9D2H4 330 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Ttc33Q9D6K7 262 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Cldn22Q9D7U6 220 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Gdap2Q9DBL2 498 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 ParvbQ9ES46 365 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Caln1Q9JJG7 219 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Itgb1bp2Q9R000 350 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Dlc1Q9R0Z9 1092 aa13.61□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Arhgef37A1IGU4 676 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Tnfrsf11bO08712 401 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Pold2O35654 469 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Sept7O55131 436 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Apba3O88888 571 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Tnnc2P20801 160 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Ccnd1P25322 295 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Gja8P28236 440 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Ptpn11P35235 597 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Rpl5P47962 297 aaKnown RBP13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Scarf2P59222 833 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Rpl26P61255 145 aaKnown RBP13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Gm3414Q3TNU4 584 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Mrgprx2Q3UG50 352 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Sult1d1Q3UZZ6 295 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Ppp1r13lQ5I1X5 824 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Gm11437Q5QR91 290 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Klra8Q60682 266 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Slc4a7Q8BTY2 1034 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Slc9a4Q8BUE1 797 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Q8CD60 292 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Cog3Q8CI04 820 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Kat14Q8CID0 779 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Gstm4Q8R5I6 218 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Evi2bQ8VD58 444 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Rhobtb2Q91V93 728 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Pcdhb6Q91XZ4 772 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Homer3Q99JP6 356 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 AticQ9CWJ9 592 aaKnown RBP13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Thg1lQ9CY52 298 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Bbs5Q9CZQ9 341 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Tbc1d20Q9D9I4 402 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Ccdc103Q9D9P2 237 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Tubb3Q9ERD7 450 aa13.6□□□□□ -0.23
Ssr1-203ENSMUST00000225246 Chrac1Q9JKP8 129 aa13.6□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 34.1 ms