RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Slc9a9Q8BZ00 644 aa15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Ndufs2Q91WD5 463 aa15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Pcdhb1Q91Y08 818 aa15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Gstt4Q9D4P7 240 aa15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Mkrn2Q9ERV1 416 aaKnown RBP15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Gm4846B2RWH8 538 aa15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Timm13P62075 95 aa15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Afap1l2Q5DTU0 825 aa15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Grik1Q60934 836 aa15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Aldh1a2Q62148 518 aa15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Lsm14bQ8CGC4 385 aaKnown RBP15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 GneQ91WG8 722 aaKnown RBP15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Spats2lQ91WJ7 558 aaKnown RBP15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Ppp1r16aQ923M0 524 aa15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Slc15a2Q9ES07 729 aa15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Gm21964A0A1W2P7S4 437 aa15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Ttc17E9PVB5 1198 aa15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Atf6F6VAN0 656 aa15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Znf800Q0VEE6 662 aa15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Oas1fQ14AZ4 364 aa15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Tars2Q3UQ84 723 aaKnown RBP15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Znf354cQ571J5 560 aa15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Prrg2Q8R182 198 aa15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Gemin2Q9CQQ4 269 aa15.93■□□□□ 0.14
Upf1-202ENSMUST00000215817 Xbp1O35426 267 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Mdh1P14152 334 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Pfdn6Q03958 127 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Smyd5Q3TYX3 416 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Nudt18Q3U2V3 323 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Ccdc61Q3UJV1 511 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Ccnt2Q7TQK0 723 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 CgasQ8C6L5 507 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Ggt7Q99JP7 662 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Spint1Q9R097 507 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Gm1758F6VZZ1 202 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Slc6a20bO88575 635 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Zfy2P20662 777 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Klra1P20937 262 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Lmo2P25801 158 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 DmpkP54265 631 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Fbxw2Q60584 422 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Tspyl5Q69ZB3 406 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Znf622Q91VY9 476 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Pde6cQ91ZQ1 861 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 DarsQ922B2 501 aaKnown RBP15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Slc39a3Q99K24 317 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Scgb2b11A0A087WR49 112 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Psmc3O88685 442 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Gucy2eP52785 1108 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Cdh9P70407 786 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Vwa2Q70UZ7 791 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Cep104Q80V31 926 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Rfx6Q8C7R7 927 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Cdk17Q8K0D0 523 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Oas1dQ8VI95 361 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Creld2Q9CYA0 350 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 ArpinQ9D0A3 226 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Scn11aQ9R053 1765 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Col22a1E9Q7P1 1613 aa15.92■□□□□ 0.14
Upf1-202ENSMUST00000215817 Becn2P0DM65 447 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Fen1P39749 378 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Nr2c2P49117 596 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 PtpaP58389 323 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Aarsd1Q3THG9 412 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 RilpQ5ND29 369 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Ksr1Q61097 873 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Casc4Q6P2L7 435 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Gtf3c6Q9D8P7 227 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Ecm29Q6PDI5 1840 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 TpteG5E8H5 664 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 4930502E18RikQ14BQ3 236 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Zmym1Q3TJB1 983 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Fam189a2Q4FZH1 290 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Luc7l3Q5SUF2 432 aaKnown RBP15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 VwdeQ6DFV8 926 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 AarsQ8BGQ7 968 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Fbxl13Q8CDU4 790 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Cd300ldQ8VCH2 221 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Mapk13Q9Z1B7 366 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Gm1141B9EJU1 475 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Gm21962L7N280 338 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Epb41l4aP52963 686 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Arl4cP61208 192 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Tfdp2Q64163 446 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Ints6lQ8BND4 861 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Ulbp1Q8HWA3 334 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 DtnaQ9D2N4 746 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Tmed2Q9R0Q3 201 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 TfgQ9Z1A1 397 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Scn3aA2ASI5 1947 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Serpinb3cA2RSF9 386 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Axin1O35625 863 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Camk4P08414 469 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Rpl7aP12970 266 aaKnown RBP15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Shmt1P50431 478 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Col9a2Q07643 688 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Krt26Q3TRJ4 462 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 Defb34Q7TNV8 81 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 WhrnQ80VW5 918 aa15.91■□□□□ 0.14
Upf1-202ENSMUST00000215817 CtbsQ8R242 366 aa15.91■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms