RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Mamdc2Q8CG85 686 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ap3m2Q8R2R9 418 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 SerhlQ9EPB5 311 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tmod3Q9JHJ0 352 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ptpn4Q9WU22 926 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Pik3r2O08908 722 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Cdh16O88338 830 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Pla2g6P97819 807 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 1810049J17RikQ3V2G9 153 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Usp6nlQ80XC3 819 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Usp1Q8BJQ2 784 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Rmnd1Q8CI78 450 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Pih1d1Q9CQJ2 290 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Wars2Q9CYK1 360 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ccdc103Q9D9P2 237 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Tm9sf1Q9DBU0 606 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Rdh14Q9ERI6 334 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Tmem59Q9QY73 323 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Clcn2Q9R0A1 908 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Lamb1P02469 1786 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 MafgO54790 162 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Fgfr2P21803 821 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Arhgap45Q3TBD2 1116 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Lrrc14bQ3UJB3 510 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Slc9b2Q5BKR2 547 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Tmprss11eQ5S248 423 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 LbpQ61805 481 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 NostrinQ6WKZ7 506 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Lsm8Q6ZWM4 96 aaKnown RBP10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Tmem74Q8BQU7 305 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Il33Q8BVZ5 266 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Rtp1Q8C8C1 263 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 TwnkQ8CIW5 685 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Abcg3Q99P81 650 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Aldh1b1Q9CZS1 519 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 DcpsQ9DAR7 338 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Olfr391-psA0A0U1RNJ4 312 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Mroh4G3X8W1 983 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Xbp1O35426 267 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 LgmnO89017 435 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 CblP22682 913 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Gjb1P28230 283 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Drg1P32233 367 aaKnown RBP10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 ClgnP52194 611 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Gata5P97489 404 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Trim71Q1PSW8 855 aaKnown RBP10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Slc38a5Q3U1J0 479 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Foxred2Q3USW5 665 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Wdr18Q4VBE8 431 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Rgl2Q61193 778 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Jade1Q6ZPI0 834 aaKnown RBP10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Olfr1505Q7TQQ2 316 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Fra10ac1Q8BP78 315 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ugp2Q91ZJ5 508 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Msi2Q920Q6 346 aaKnown RBP10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Mfsd5Q921Y4 450 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Mettl16Q9CQG2 553 aaKnown RBP10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Kat2aQ9JHD2 830 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Neu2Q9JMH3 379 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Cd97Q9Z0M6 818 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Mbd1Q9Z2E2 636 aa10.08□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Dcdc2bF7BCK0 340 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Adrbk2Q3UYH7 688 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Esyt3Q5DTI8 891 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Parp6Q6P6P7 630 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Tas2r102Q7M717 329 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ireb2Q811J3 963 aaKnown RBP10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Azin2Q8BVM4 459 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Angel1Q8VCU0 667 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Me2Q99KE1 589 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Sgf29Q9DA08 293 aaKnown RBP10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Copg2Q9QXK3 871 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Dnajc12Q9R022 198 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Dlc1Q9R0Z9 1092 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Trpv2Q9WTR1 756 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Olfr456B2RT27 312 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Olfr1354E9Q5G9 310 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Olfr611K7N609 323 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Olfr612L7N462 323 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Cbx2P30658 519 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Lypla1P97823 230 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 ItkQ03526 625 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 RnaselQ05921 735 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Baiap2l2Q80Y61 522 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 MafaQ8CF90 359 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Adprhl2Q8CG72 370 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 HscbQ8K3A0 234 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Olfr458Q8VF80 313 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Olfr457Q8VGP5 313 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Necab2Q91ZP9 389 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Catsper1Q91ZR5 686 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Dcaf6Q9DC22 876 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Tnni1Q9WUZ5 187 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Gbp6A0A0G2JDV3 611 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Dhx35A2ACQ1 703 aaKnown RBP10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Srsf11E9Q6E5 511 aaKnown RBP10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Olfr67F8VPJ8 320 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Zfp275G3X904 499 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Akap1O08715 857 aaKnown RBP10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ebf2O08792 575 aa10.07□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms