RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Q8BHN7 327 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Exoc3l1Q8BI71 739 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Dcun1d2Q8BZJ7 259 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Lrrc19Q8BZT5 364 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Tfb1mQ8JZM0 345 aaKnown RBP10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Mrpl58Q8R035 206 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Plcb4Q91UZ1 1175 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Med7Q9CZB6 233 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Chst7Q9EP78 484 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ropn1Q9ESG2 212 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 CitP49025 2055 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Mroh5E9PUJ8 762 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Gm10250G3X9L6 160 aaKnown RBP10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Clk2O35491 499 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 SpibO35906 267 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Glb1P23780 647 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 GsrP47791 500 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Il1rapl1P59823 695 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 RenbpP82343 430 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ly9Q01965 654 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 XiapQ60989 496 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Vps72Q62481 368 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Kcns3Q8BQZ8 491 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Clip4Q8CI96 704 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 TgdsQ8VDR7 355 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 PlvapQ91VC4 438 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Dpp3Q99KK7 738 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Tekt1Q9DAJ2 418 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 DcpsQ9DAR7 338 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Atp5hQ9DCX2 161 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Tbx20Q9ES03 445 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Hs6st3Q9QYK4 470 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Megf6Q80V70 1572 aa10.17□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Fen1P39749 378 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 MafP54843 370 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Hipk4Q3V016 616 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Rap1gap2Q5SVL6 712 aaKnown RBP10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Map3k7Q62073 579 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Sp140Q6NSQ5 534 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Cand1Q6ZQ38 1230 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Rpf1Q7TND5 349 aaKnown RBP10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Q8BGA7 448 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Thnsl1Q8BH55 747 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Pi4kbQ8BKC8 816 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ap3m2Q8R2R9 418 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Olfr395Q8VGR3 312 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Pdk3Q922H2 415 aaKnown RBP10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 AenQ9CZI9 336 aaKnown RBP10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Mms19Q9D071 1031 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ppp1r12aQ9DBR7 1029 aaKnown RBP10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Tnfsf13bQ9WU72 309 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Krt16Q9Z2K1 469 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Zfc3h1B2RT41 1992 aaKnown RBP10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 PatjQ63ZW7 1834 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 1700031M16RikA0A087WSH0 82 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Gm20721E9Q2U8 318 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Hsd17b14E9Q3D4 273 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Gm20509G3UZF1 325 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Efna5O08543 228 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Klf6O08584 283 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Cyp2j6O54750 501 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Mmp10O55123 476 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Clcn3P51791 818 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Lypla1P97823 230 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Dact3Q0PHV7 610 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Pld5Q3UNN8 536 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Hif1aQ61221 836 aaKnown RBP10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Grid2Q61625 1007 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Gdpd5Q640M6 607 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Gucy2gQ6TL19 1100 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Usp6nlQ80XC3 819 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Tyw3Q8BSA9 257 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Hsdl1Q8BTX9 330 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Zfp62Q8C827 914 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Q8CIL4 281 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 AslQ91YI0 464 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Tas1r2Q925I4 843 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Krt20Q9D312 431 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Scyl3Q9DBQ7 735 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Rassf7Q9DD19 359 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Abt1Q9QYL7 269 aaKnown RBP10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 HnrnpcQ9Z204 313 aaKnown RBP10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Mtmr7Q9Z2C9 660 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ptpn3A2ALK8 913 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 F6Y6L6 278 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 PtpraP18052 829 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 PdgfaP20033 211 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Gjb3P28231 270 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Rpl10aP53026 217 aaKnown RBP10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 TdgP56581 421 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Vil1Q62468 827 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Dusp16Q6PCP3 660 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 ItpkcQ7TS72 678 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Dars2Q8BIP0 653 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Eif2aQ8BJW6 581 aaKnown RBP10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ablim1Q8K4G5 861 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Wdr98Q8VC42 657 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Fam49bQ921M7 324 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Trps1Q925H1 1281 aa10.16□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Cox16Q9CR63 106 aa10.16□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms