RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Cdh23Q99PF4 3354 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Igkv5-43A0A0B4J1J2 115 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Cyp4a12bA2A974 508 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Tldc2A2ACG1 198 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Gm12695A2AGB2 545 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Man1b1A2AJ15 658 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 4930444G20RikD3Z741 495 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Daw1D3Z7A5 415 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 March10E9PX79 788 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Zfp651E9PZ11 729 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Vmn2r100E9QAZ9 850 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Kifc3O35231 824 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Slc2a4P14142 509 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Hmga1P17095 107 aaKnown RBP9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Adamts8P57110 905 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 YwhazP63101 245 aaKnown RBP9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 YwhaqP68254 245 aaKnown RBP9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Tmem26Q3UP23 366 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Ttf2Q5NC05 1138 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Arhgap30Q640N3 1101 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Rasa4Q6PFQ7 802 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Pdcl2Q78Y63 240 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Defb34Q7TNV8 81 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Erlin2Q8BFZ9 340 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Creb3l2Q8BH52 521 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Haus1Q8BHX1 278 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 LarsQ8BMJ2 1178 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Fndc3aQ8BX90 1198 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Ccdc12Q8R344 166 aaKnown RBP9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Znf622Q91VY9 476 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Cyp4a12aQ91WL5 508 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Trps1Q925H1 1281 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 CenpsQ9D084 142 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 TsaccQ9DA44 124 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 NbnQ9R207 751 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Grk1Q9WVL4 564 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Scn8aQ9WTU3 1978 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 KcpQ3U492 1550 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 A930018M24RikB7ZMY3 218 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Gm10719E9Q7T3 227 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Spata31E9QAF0 1014 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 SrgnP13609 152 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Cd44P15379 778 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Ap2a2P17427 938 aaKnown RBP9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Krt80Q0VBK2 452 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Lrrc47Q505F5 581 aaKnown RBP9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Zbtb17Q60821 794 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 TfrcQ62351 763 aaKnown RBP9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Tmem169Q8BG50 297 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 FsbpQ8BKE5 299 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 SgczQ8BX51 311 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Q8C4P0 716 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Kctd12bQ8C7J6 292 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Olfr1353Q8VGU8 309 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Ppa2Q91VM9 330 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Fads1Q920L1 447 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Adam33Q923W9 797 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 EpgnQ924X1 152 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Rilpl2Q99LE1 197 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Fbxo32Q9CPU7 355 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Trmt11Q9CWH5 460 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Mis12Q9CY25 206 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 MtrexQ9CZU3 1040 aaKnown RBP9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Cpxm2Q9D2L5 764 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Adamts5Q9R001 930 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Pld1Q9Z280 1074 aa9.28□□□□□ -0.92
Ccdc28a-201ENSMUST00000052648 Vmn2r115E9Q0E7 857 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 AlpiF8VPQ6 554 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Tsta3P23591 321 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ptk2P34152 1090 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 FynP39688 537 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Cxcl12P40224 93 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Mc4rP56450 332 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Cdh9P70407 786 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Irf7P70434 457 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Wbp2P97765 261 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Vav2Q60992 868 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Txndc8Q69AB2 127 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ncapg2Q6DFV1 1138 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Krit1Q6S5J6 736 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 SpopQ6ZWS8 374 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 March4Q80TE3 409 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Trim62Q80V85 475 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Clec2eQ80XD9 204 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Maats1Q8BRC6 783 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Slc41a2Q8BYR8 573 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 CgasQ8C6L5 507 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Taf10Q8K0H5 218 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Trim68Q8K243 485 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Barhl2Q8VIB5 384 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ugp2Q91ZJ5 508 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Slc25a11Q9CR62 314 aaKnown RBP9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 NapgQ9CWZ7 312 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Pramef12Q9D2F1 463 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Kif12Q9D2Z8 642 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Dcaf6Q9DC22 876 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Cpne8Q9DC53 577 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 ParvaQ9EPC1 372 aa9.27□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 PtprfA2A8L5 1898 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Lcn6A2AJB9 181 aa9.26□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms