RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Samd11Q1RNF8 542 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gsdmc2Q2KHK6 480 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gsdmc4Q3TR54 480 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Mtus1Q5HZI1 1210 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Rab34Q64008 259 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Crtc1Q68ED7 630 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gpr142Q7TQN9 365 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ankrd52Q8BTI7 1076 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 AA792892Q8C6S1 278 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gsdmc3Q8CB12 480 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Krt222Q8CCX5 294 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ppa2Q91VM9 330 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Mrps2Q924T2 291 aaKnown RBP9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 DmgdhQ9DBT9 869 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Rmdn1Q9DCV4 305 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Sf3b1Q99NB9 1304 aaKnown RBP9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 BC025446A0A087WQT1 134 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Bpifb9bA2AJD1 591 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ppfia4B8QI36 1187 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Gdap1O88741 358 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Pgk1P09411 417 aaKnown RBP9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 PrkchP23298 683 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Cpne7Q0VE82 557 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Pid1Q3UBG2 217 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 ItgadQ3V0T4 1168 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ndufaf2Q59J78 168 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Myo6Q64331 1265 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Tmc8Q7TN58 722 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Sytl5Q80T23 753 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Bpifb9aQ80XI7 591 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Nlrp4aQ8BU40 982 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Fsd1lQ8BYN5 507 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ifi205aQ8CGE8 404 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Acvr1cQ8K348 493 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ugp2Q91ZJ5 508 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Kdelr1Q99JH8 212 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 ToporslQ9D2F8 683 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Fam3aQ9D8T0 230 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Prpf4Q9DAW6 521 aaKnown RBP9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Kif26aQ52KG5 1881 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Gm8113E0CXS8 587 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Gm11236J3QMS7 360 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Slc11a2P49282 568 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Hsd17b2P51658 381 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Adcy6Q01341 1165 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Fads2p1Q0VAX3 487 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Krt80Q0VBK2 452 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Six1Q62231 284 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Nlrp14Q6B966 993 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Prrt3Q6PE13 971 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Trub1Q8C0D0 338 aaKnown RBP9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Zbtb6Q8K088 423 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Uroc1Q8VC12 676 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Olfr348Q8VGK3 313 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Trmt11Q9CWH5 460 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Pin4Q9CWW6 131 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Trpc2Q9R244 1172 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 BC049352E9Q2Z6 85 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Pate1E9Q658 125 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Gm3336J3QMQ6 198 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Olfr1022L7MTT3 315 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Pbx2O35984 430 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Itgb1P09055 798 aaKnown RBP9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Becn2P0DM65 447 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Stt3bQ3TDQ1 823 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Dnajc1Q61712 552 aaKnown RBP9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ttyh3Q6P5F7 524 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Zfp512bQ6PHP4 879 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Zdhhc17Q80TN5 632 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Pcsk9Q80W65 694 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Pak4Q8BTW9 593 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Prpf39Q8K2Z2 665 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Pcdhb19Q91Y01 801 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Cwh43Q91YL7 699 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Mettl13Q91YR5 698 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Rnf112Q96DY5 654 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Slc22a3Q9WTW5 551 aa9.08□□□□□ -0.96
Trim39-201ENSMUST00000042717 Obsl1D3YYU8 1804 aaKnown RBP9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Arhgap42B2RQE8 841 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Rasal2E9PW37 1286 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Dnajc21E9Q8D0 531 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Gm5160F8VPN3 147 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Kdelc2G5E897 503 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Fzd1O70421 642 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Tnfaip1O70479 316 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Odc1P00860 461 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 P01652 108 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Slc12a2P55012 1205 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 DsppP97399 934 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Prss36Q5K2P8 849 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 FntaQ61239 377 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Sema3cQ62181 751 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Ppp1r26Q6A025 1163 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Gabbr2Q80T41 940 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Lrsam1Q80ZI6 727 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Thnsl1Q8BH55 747 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Iars2Q8BIJ6 1012 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Neu4Q8BZL1 478 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Csnk1g3Q8C4X2 424 aa9.07□□□□□ -0.96
Trim39-201ENSMUST00000042717 Tldc1Q8K0P3 455 aa9.07□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms