RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Ass1P16460 412 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Ccnd1P25322 295 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Rab17P35292 214 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Thumpd3P97770 505 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Hipk4Q3V016 616 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Pdp2Q504M2 532 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 PighQ5M9N4 188 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Nab1Q61122 486 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Psen2Q61144 448 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Fbxo41Q6NS60 873 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Slc17a6Q8BLE7 582 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Svs3bQ8BZH8 265 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Arhgap29Q8CGF1 1266 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Stoml1Q8CI66 399 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Gtpbp10Q8K013 366 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 UvragQ8K245 698 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Irak3Q8K4B2 609 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Ddx39aQ8VDW0 427 aaKnown RBP13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Olfr458Q8VF80 313 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Olfr457Q8VGP5 313 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Decr1Q9CQ62 335 aaKnown RBP13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 PompQ9CQT5 141 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Castor1Q9CWQ8 331 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Ap2b1Q9DBG3 937 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Trpc3Q9QZC1 836 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Krt16Q9Z2K1 469 aa13.95□□□□□ -0.18
Nup88-201ENSMUST00000035283 Ccdc8D3YZV8 685 aa13.94□□□□□ -0.18
Nup88-201ENSMUST00000035283 Vmn2r72D3Z4N8 856 aa13.94□□□□□ -0.18
Nup88-201ENSMUST00000035283 Krt13P08730 437 aa13.94□□□□□ -0.18
Nup88-201ENSMUST00000035283 Nr2c2P49117 596 aa13.94□□□□□ -0.18
Nup88-201ENSMUST00000035283 Matn1P51942 500 aaKnown RBP13.94□□□□□ -0.18
Nup88-201ENSMUST00000035283 Lypla1P97823 230 aa13.94□□□□□ -0.18
Nup88-201ENSMUST00000035283 Adamts18Q4VC17 1219 aa13.94□□□□□ -0.18
Nup88-201ENSMUST00000035283 Gdpd5Q640M6 607 aa13.94□□□□□ -0.18
Nup88-201ENSMUST00000035283 Tfdp2Q64163 446 aa13.94□□□□□ -0.18
Nup88-201ENSMUST00000035283 Dcun1d2Q8BZJ7 259 aa13.94□□□□□ -0.18
Nup88-201ENSMUST00000035283 Ago3Q8CJF9 860 aa13.94□□□□□ -0.18
Nup88-201ENSMUST00000035283 Angel2Q8K1C0 544 aa13.94□□□□□ -0.18
Nup88-201ENSMUST00000035283 Tspan8Q8R3G9 235 aa13.94□□□□□ -0.18
Nup88-201ENSMUST00000035283 Necab2Q91ZP9 389 aa13.94□□□□□ -0.18
Nup88-201ENSMUST00000035283 Tas1r2Q925I4 843 aa13.94□□□□□ -0.18
Nup88-201ENSMUST00000035283 SncaipQ99ME3 962 aa13.94□□□□□ -0.18
Nup88-201ENSMUST00000035283 Nudt8Q9CR24 210 aa13.94□□□□□ -0.18
Nup88-201ENSMUST00000035283 Chst7Q9EP78 484 aa13.94□□□□□ -0.18
Nup88-201ENSMUST00000035283 Jph2Q9ET78 696 aa13.94□□□□□ -0.18
Nup88-201ENSMUST00000035283 Col4a3Q9QZS0 1669 aa13.94□□□□□ -0.18
Nup88-201ENSMUST00000035283 F6Y6L6 278 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Hspa1lP16627 641 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Rpl5P47962 297 aaKnown RBP13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 S100bP50114 92 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Dsc2P55292 902 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Bace1P56818 501 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Lzts1P60853 599 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 SnnP61807 88 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 YwhaeP62259 255 aaKnown RBP13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Taf1bP97358 586 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Ikzf1Q03267 517 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Hsph1Q61699 858 aaKnown RBP13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Scaf4Q6PFF0 1209 aaKnown RBP13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Olfr299Q7TS05 330 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Atg16l1Q8C0J2 607 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Adamts2Q8C9W3 1213 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Ephb1Q8CBF3 984 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Spata1Q9D5R4 444 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Ccdc103Q9D9P2 237 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Mrpl4Q9DCU6 294 aaKnown RBP13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 GmprQ9DCZ1 345 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Tnfrsf14A0A1W2P7D5 276 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Sh3pxd2bA2AAY5 908 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Ccdc175E9PVB3 822 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Adam15O88839 864 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 EpoP07321 192 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Myl4P09541 193 aaKnown RBP13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Q3TQQ9 903 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Fam91a1Q3UVG3 837 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Ttc9Q3V038 219 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Foxd4Q60688 444 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 FAM120AQ6A0A9 1112 aaKnown RBP13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Gm2163Q6PCY5 473 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Rad54bQ6PFE3 886 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Serpinb3dQ6UKZ0 387 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Znf12Q7TSI0 686 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Ip6k2Q80V72 448 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Tbx10Q810F8 385 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Podxl2Q8CAE9 603 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Prpf31Q8CCF0 499 aaKnown RBP13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Polr2bQ8CFI7 1174 aaKnown RBP13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Kat14Q8CID0 779 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Dync1li1Q8R1Q8 523 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Rilpl2Q99LE1 197 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Ecrg4Q99LS0 148 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Slc12a9Q99MR3 914 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Ripk3Q9QZL0 486 aa13.93□□□□□ -0.18
Nup88-201ENSMUST00000035283 Skint3A7TZF0 458 aa13.92□□□□□ -0.18
Nup88-201ENSMUST00000035283 Ptar1E9QAB6 424 aa13.92□□□□□ -0.18
Nup88-201ENSMUST00000035283 Cetn1P41209 172 aa13.92□□□□□ -0.18
Nup88-201ENSMUST00000035283 Tnni3P48787 211 aa13.92□□□□□ -0.18
Nup88-201ENSMUST00000035283 SftpdP50404 374 aa13.92□□□□□ -0.18
Nup88-201ENSMUST00000035283 Bop1P97452 732 aaKnown RBP13.92□□□□□ -0.18
Nup88-201ENSMUST00000035283 PrkcqQ02111 707 aa13.92□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 86.3 ms