RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 GabrqQ9JLF1 638 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ruvbl2Q9WTM5 463 aaKnown RBP14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Calb2Q08331 271 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 GmppbQ8BTZ7 360 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Atp10bB1AWN4 1474 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Kat6aQ8BZ21 2003 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Srpk1O70551 648 aaKnown RBP14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Dyrk4Q8BI55 632 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Slc9b1Q8C0X2 565 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Q8C1R3 189 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Trim9Q8C7M3 817 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Mrpl57Q9CQF8 102 aaKnown RBP14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Atg7Q9D906 698 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Tm9sf1Q9DBU0 606 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Gm44511A0A0N4SW10 223 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 CnpP16330 420 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Nedd4P46935 887 aaKnown RBP14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Magee1Q6PCZ4 918 aaKnown RBP14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Akr1c20Q8VC77 323 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ttc30bQ9CY00 664 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Fam91a1Q3UVG3 837 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Mmgt1Q8K273 131 aaKnown RBP14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 DgkgQ91WG7 788 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Pcsk1P63239 753 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Epb41l5Q8BGS1 731 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Senp7Q8BUH8 1037 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Fam118bQ8C569 351 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Leng8Q8CBY3 785 aaKnown RBP14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Tnfaip8Q921Z5 198 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Lsm7Q9CQQ8 103 aaKnown RBP14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ppp2r3cQ9JK24 453 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Slfn1Q9Z0I7 337 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Gm340F6RGI3 1242 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Rag1P15919 1040 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Pabpc1P29341 636 aaKnown RBP14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ptchd3Q0EEE2 906 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Eno4Q8C042 619 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Tmem79Q9D709 391 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Gm7356A0A087WSA6 508 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Itga3Q62470 1053 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Gpr141Q7TQP0 305 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Hars2Q99KK9 505 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 GsdmcQ99NB5 468 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Prkar1aQ9DBC7 381 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Zscan4-ps3A0A1B0GRH6 506 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Zscan4-ps2A0A1C7CYU6 506 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Cyp2c23E9Q5K4 494 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 RnpepQ8VCT3 650 aaKnown RBP14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Add1Q9QYC0 735 aaKnown RBP14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ercc4Q9QZD4 917 aa14.36□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Clk2O35491 499 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Stip1Q60864 543 aaKnown RBP14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Defa17Q64016 82 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Sema3dQ8BH34 777 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Tmem145Q8C4U2 746 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Hes6Q9JHE6 224 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Simc1E9Q6E9 1354 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ccdc163A2AGD7 326 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Klhl32A2AJX0 620 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ttll3A4Q9E5 927 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Scn1bP97952 218 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Syce2Q505B8 171 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Otop3Q80UF9 577 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Pnma2Q8BHK0 365 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Fam102bQ8BQS4 339 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Mettl13Q91YR5 698 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Eif3mQ99JX4 374 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Vmn2r87E9PZX4 848 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 FancfE9Q5Z5 343 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Cdh16O88338 830 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Il1rl1P14719 567 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Slc11a2P49282 568 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Zfyve28Q6ZPK7 905 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Fam185aQ7TPD2 378 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Rxfp2Q91ZZ5 737 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Q9D1F3 157 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Mettl7bQ9DD20 244 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Tmem45a2B7ZWJ5 289 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Nmt2O70311 529 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 AfmO89020 608 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Pla2g4bP0C871 782 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 AgtP11859 477 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Mfn1Q811U4 741 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Tbc1d14Q8CGA2 694 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Rpap3Q9D706 660 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Vmn2r4K7N784 913 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Akr1c6P70694 323 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Fam183bQ5NC57 135 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Hesx1Q61658 185 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Lcn3Q62471 182 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Lrrn2Q6PHP6 730 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Gpatch1Q9DBM1 930 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ptpn4Q9WU22 926 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Usp31E9Q6Y8 1344 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 PdynO35417 248 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 PolP11369 1281 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Scd1P13516 355 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Cops7bQ8BV13 264 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Catsper4Q8BVN3 442 aa14.35□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Stau2Q8CJ67 570 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms