RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 PodxlQ9R0M4 503 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Cntnap5aQ0V8T9 1304 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Olfr391-psA0A0U1RNJ4 312 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Pax3P24610 479 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Shox2P70390 331 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 PrlrQ08501 608 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Cage1Q5IR70 849 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Aldh5a1Q8BWF0 523 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Naa25Q8BWZ3 972 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Usp20Q8C6M1 916 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 NamptQ99KQ4 491 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Mcrs1Q99L90 462 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 CenpkQ9ESN5 271 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ly75Q60767 1723 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Capn6O35646 641 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 RarbP22605 482 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 YwhazP63101 245 aaKnown RBP8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Cdk16Q04735 496 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ptcd3Q14C51 685 aaKnown RBP8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Shroom1Q5SX79 823 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Npdc1Q64322 332 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Fcrl5Q68SN8 596 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Far2Q7TNT2 515 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Trnp1Q80ZI1 223 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ankrd52Q8BTI7 1076 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Pde6cQ91ZQ1 861 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Prpsap1Q9D0M1 356 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 IkbkgO88522 412 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Fbxo39Q5NBU5 443 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Mcph1Q7TT79 822 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Trmt13Q8BYH3 481 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 NcaphQ8C156 731 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Il36gQ8R460 164 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Olfr385Q8VGT1 312 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 DeraQ91YP3 318 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ophn1Q99J31 802 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Acbd6Q9D061 282 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ppp1r2Q9DCL8 206 aa8.79□□□□□ -1
Sf3b1-201ENSMUST00000027127 Hsd17b14E9Q3D4 273 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Atf6F6VAN0 656 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Bmp2P21274 394 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Serpina6Q06770 397 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Arhgap1Q5FWK3 439 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Acap2Q6ZQK5 770 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ttc39bQ8BYY4 617 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Abi1Q8CBW3 481 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Eif4e3Q9DBB5 207 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 PnkpQ9JLV6 522 aaKnown RBP8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 FaahO08914 579 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 TnfP06804 235 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Pgk2P09041 417 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Kcnq1P97414 668 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Gabpb1Q00420 383 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ndst1Q3UHN9 882 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Rnf25Q9QZR0 456 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Trpc2Q9R244 1172 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 HunkO88866 714 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Mmp13P33435 472 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 DmpkP54265 631 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Emilin3P59900 758 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Pfdn6Q03958 127 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Ankmy2Q3TPE9 440 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Fbxw10Q5SUS0 1030 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Txndc8Q69AB2 127 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 AA792892Q8C6S1 278 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Pkn3Q8K045 878 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 HibchQ8QZS1 385 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Slc13a3Q91Y63 600 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 PdgfdQ925I7 370 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Rnf138rt1Q9D9M9 248 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Htra2Q9JIY5 458 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Cyth1Q9QX11 398 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Magel2Q9QZ04 1284 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Shcbp1Q9Z179 668 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Vmn2r104E9Q2J5 860 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Nrg3O35181 713 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Nek2O35942 443 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 CblP22682 913 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Atp5bP56480 529 aaKnown RBP8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Tars2Q3UQ84 723 aaKnown RBP8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Fndc3bQ6NWW9 1207 aaKnown RBP8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Nim1kQ8BHI9 436 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Pyhin1Q8BV49 420 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Afap1l1Q8BZI0 768 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Map1sQ8C052 973 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Spon1Q8VCC9 807 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 TtpalQ9D3D0 343 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Slc8a3S4R2P9 928 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Dennd5bA2RSQ0 1274 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Acp4D3YTS9 425 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Srpk1O70551 648 aaKnown RBP8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Rdh7O88451 316 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Prl3b1P09586 222 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 RargP18911 458 aaKnown RBP8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 ChukQ60680 745 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Acvrl1Q61288 502 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Gm5414Q6IFZ8 552 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Glra2Q7TNC8 452 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Fbxw21Q8BI38 468 aa8.78□□□□□ -1
Sf3b1-201ENSMUST00000027127 Iqsec1Q8R0S2 961 aa8.78□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms