RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Pcdha9Q91Y11 979 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Rbbp6P97868 1790 aaKnown RBP13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Gm20509G3UZF1 325 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Olfr611K7N609 323 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Olfr612L7N462 323 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Serpinb9O08797 374 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Lypla1P97823 230 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Apba2P98084 750 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ogfod1Q3U0K8 545 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Brip1Q5SXJ3 1174 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Cyp2c29Q64458 490 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Cnksr2Q80YA9 1032 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Fbxw8Q8BIA4 598 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 WdpcpQ8C456 722 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Snap47Q8R570 413 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Cpt1bQ924X2 772 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mettl16Q9CQG2 553 aaKnown RBP13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 RalbQ9JIW9 206 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Tagln3Q9R1Q8 199 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Rhbdl2A2AGA4 302 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ccdc8D3YZV8 685 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Fbxl18E9PYR1 771 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Dusp8O09112 663 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Dsg3O35902 993 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Slc10a3P21129 473 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Trcg1Q58Y74 825 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 B3gnt3Q5JCS9 372 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Sarm1Q6PDS3 724 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Rassf9Q8K342 435 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 OlahQ8R197 265 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Uroc1Q8VC12 676 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 1700129C05RikQ9CQ77 218 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Zscan12Q9Z1D7 501 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Arih1Q9Z1K5 555 aa13.19□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Apold1E9Q0X2 246 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ebf2O08792 575 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Rtn2O70622 471 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Atxn10P28658 475 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Scg3P47867 471 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 PklrP53657 574 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mmp20P57748 482 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Zbtb14Q08376 449 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ampd1Q3V1D3 745 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Krt73Q6NXH9 539 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mapk4Q6P5G0 583 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Slc9c1Q6UJY2 1175 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Cops7bQ8BV13 264 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 AgpsQ8C0I1 645 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Mark4Q8CIP4 752 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Twf1Q91YR1 350 aaKnown RBP13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ankef1Q9D2J7 775 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 LrgukQ9D5S7 820 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Borcs6Q9D6W8 360 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Nrf1Q9WU00 503 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Myh8P13542 1937 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Akap5D3YVF0 745 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Vmn2r87E9PZX4 848 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Vmn2r39L7N2E5 861 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ptpn20O55082 426 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Birc5O70201 140 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Gad2P48320 585 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ppp3ccP48455 513 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Il1rapl1P59823 695 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Akr1c6P70694 323 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Fam172aQ3TNH5 417 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Fam198bQ3UPI1 517 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 MyrfQ3UR85 1138 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Tcf4Q60722 670 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 EtnpplQ8BWU8 499 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Nsl1Q8K305 281 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ankrd49Q8VE42 238 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ccdc70Q9D9B0 223 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ccdc103Q9D9P2 237 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Prl2b1Q9DAZ2 228 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Tmod3Q9JHJ0 352 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Gcnt4E9Q649 455 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Gm7942L7N277 499 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Akap1O08715 857 aaKnown RBP13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Il12bP43432 335 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ubxn2bQ0KL01 331 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 1810049J17RikQ3V2G9 153 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Esyt3Q5DTI8 891 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Nell2Q61220 819 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Rhbdf1Q6PIX5 856 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Gucy2gQ6TL19 1100 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ahcyl1Q80SW1 530 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Znf618Q80YY7 953 aaKnown RBP13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Fbxo44Q8BK26 255 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Stard7Q8R1R3 373 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Paip2bQ91W45 136 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 KlbQ99N32 1043 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Dcaf6Q9DC22 876 aa13.18□□□□□ -0.3
Clcn3-201ENSMUST00000004430 MyrflQ3UN70 904 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Pgrmc2Q80UU9 217 aaKnown RBP13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Echdc3Q9D7J9 300 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Ccr10Q9JL21 362 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Sfmbt1Q9JMD1 863 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Fam205a1D3YZF6 1314 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 1700031M16RikA0A087WSH0 82 aa13.17□□□□□ -0.3
Clcn3-201ENSMUST00000004430 Olfr1354E9Q5G9 310 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 43 ms