RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W VAN1P23642 535 aa8.87□□□□□ -0.99
HDA1YNL021W GRX1P25373 110 aaKnown RBP8.87□□□□□ -0.99
HDA1YNL021W GEA2P39993 1459 aaKnown RBP8.86□□□□□ -0.99
HDA1YNL021W NUP159P40477 1460 aa8.86□□□□□ -0.99
HDA1YNL021W CYC8P14922 966 aa8.86□□□□□ -0.99
HDA1YNL021W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.86□□□□□ -0.99not detected
HDA1YNL021W APC11Q12157 165 aa8.86□□□□□ -0.99
HDA1YNL021W YGR161W-CQ3E744 92 aa8.86□□□□□ -0.99
HDA1YNL021W MET6P05694 767 aaKnown RBP8.85□□□□□ -0.99
HDA1YNL021W NAB3P38996 802 aaKnown RBP RIP-Chip data8.85□□□□□ -0.99not detected
HDA1YNL021W YEL023CP39992 682 aa8.85□□□□□ -0.99
HDA1YNL021W NUP82P40368 713 aa8.85□□□□□ -0.99
HDA1YNL021W MET5P47169 1442 aa8.85□□□□□ -0.99
HDA1YNL021W SET4P42948 560 aa8.84□□□□□ -0.99
HDA1YNL021W GUT2P32191 649 aa8.84□□□□□ -0.99
HDA1YNL021W RPB10P22139 70 aa8.83□□□□□ -1
HDA1YNL021W PEP7P32609 515 aa8.83□□□□□ -1
HDA1YNL021W ATG3P40344 310 aa8.83□□□□□ -1
HDA1YNL021W SPR3P41901 512 aa8.83□□□□□ -1
HDA1YNL021W YGL081WP53156 320 aa8.83□□□□□ -1
HDA1YNL021W TRS33Q99394 268 aa8.83□□□□□ -1
HDA1YNL021W TIM23P32897 222 aa8.83□□□□□ -1
HDA1YNL021W YGR122WP53272 402 aa8.83□□□□□ -1
HDA1YNL021W TBF1Q02457 562 aa8.83□□□□□ -1
HDA1YNL021W IRC20Q06554 1556 aa8.83□□□□□ -1
HDA1YNL021W MNR2P35724 969 aa8.82□□□□□ -1
HDA1YNL021W YHR020WP38708 688 aaKnown RBP8.82□□□□□ -1
HDA1YNL021W YEN1P40028 759 aa8.82□□□□□ -1
HDA1YNL021W NUP170P38181 1502 aa8.82□□□□□ -1
HDA1YNL021W UBP1P25037 809 aa8.81□□□□□ -1
HDA1YNL021W YOR131CQ12486 218 aa8.81□□□□□ -1
HDA1YNL021W CAT8P39113 1433 aa8.81□□□□□ -1
HDA1YNL021W TY3B-GQ99315 1547 aa8.81□□□□□ -1
HDA1YNL021W MST1P07236 462 aa8.81□□□□□ -1
HDA1YNL021W YBR197CP38306 217 aa8.81□□□□□ -1
HDA1YNL021W VPS15P22219 1454 aa8.81□□□□□ -1
HDA1YNL021W PET112P33893 541 aa8.8□□□□□ -1
HDA1YNL021W RPA14P50106 137 aa8.8□□□□□ -1
HDA1YNL021W NUD1P32336 851 aa8.79□□□□□ -1
HDA1YNL021W AIM9P40053 627 aaKnown RBP8.79□□□□□ -1
HDA1YNL021W YPR097WQ06839 1073 aa8.79□□□□□ -1
HDA1YNL021W DPL1Q05567 589 aa8.78□□□□□ -1
HDA1YNL021W YDL121CQ07541 149 aa8.78□□□□□ -1
HDA1YNL021W YRF1-1P0CX20 1796 aa8.78□□□□□ -1
HDA1YNL021W YRF1-5P0CX21 1796 aa8.78□□□□□ -1
HDA1YNL021W YRF1-8P0CX22 1796 aa8.78□□□□□ -1
HDA1YNL021W RAD2P07276 1031 aa8.78□□□□□ -1
HDA1YNL021W TGL3P40308 642 aa8.78□□□□□ -1
HDA1YNL021W FAA4P47912 694 aaKnown RBP8.78□□□□□ -1
HDA1YNL021W DNM1P54861 757 aa8.78□□□□□ -1
HDA1YNL021W CAB1Q04430 367 aa8.78□□□□□ -1
HDA1YNL021W HXK1P04806 485 aaKnown RBP8.77□□□□□ -1.01
HDA1YNL021W NGR1P32831 672 aaKnown RBP8.77□□□□□ -1.01
HDA1YNL021W YGL015CP33199 130 aa8.77□□□□□ -1.01
HDA1YNL021W IXR1P33417 597 aa8.77□□□□□ -1.01
HDA1YNL021W FAA3P39002 694 aa8.77□□□□□ -1.01
HDA1YNL021W NOP2P40991 618 aaKnown RBP8.77□□□□□ -1.01
HDA1YNL021W MPC54Q08550 464 aa8.77□□□□□ -1.01
HDA1YNL021W SPT2P06843 333 aaPredicted RBP8.77□□□□□ -1.01
HDA1YNL021W RAD4P14736 754 aa8.77□□□□□ -1.01
HDA1YNL021W RPA135P22138 1203 aaKnown RBP8.77□□□□□ -1.01
HDA1YNL021W SEC6P32844 805 aa8.77□□□□□ -1.01
HDA1YNL021W SVL3Q03088 825 aaKnown RBP8.77□□□□□ -1.01
HDA1YNL021W YBT1P32386 1661 aa8.76□□□□□ -1.01
HDA1YNL021W GCD6P32501 712 aaKnown RBP8.76□□□□□ -1.01
HDA1YNL021W VPS35P34110 944 aa8.76□□□□□ -1.01
HDA1YNL021W YKL069WP36088 180 aa8.76□□□□□ -1.01
HDA1YNL021W HDA3Q06623 655 aa8.76□□□□□ -1.01
HDA1YNL021W SSM4P40318 1319 aa8.76□□□□□ -1.01
HDA1YNL021W ISC10P32645 267 aa8.75□□□□□ -1.01
HDA1YNL021W DUT1P33317 147 aa8.75□□□□□ -1.01
HDA1YNL021W NTH2P35172 780 aa8.75□□□□□ -1.01
HDA1YNL021W TIF4632P39936 914 aaKnown RBP8.75□□□□□ -1.01
HDA1YNL021W MSH4P40965 878 aaPredicted RBP8.75□□□□□ -1.01
HDA1YNL021W PDR12Q02785 1511 aa8.75□□□□□ -1.01
HDA1YNL021W PHO8P11491 566 aa8.75□□□□□ -1.01
HDA1YNL021W SEC2P17065 759 aa8.75□□□□□ -1.01
HDA1YNL021W MID1P41821 548 aa8.75□□□□□ -1.01
HDA1YNL021W CWC24P53769 259 aa8.75□□□□□ -1.01
HDA1YNL021W UFD2P54860 961 aa8.75□□□□□ -1.01
HDA1YNL021W UTP14Q04500 899 aaKnown RBP8.75□□□□□ -1.01
HDA1YNL021W TY1A-DR4O74302 440 aa8.74□□□□□ -1.01
HDA1YNL021W TY1A-HP0C2I4 478 aaKnown RBP8.74□□□□□ -1.01
HDA1YNL021W TY1A-AP0CX57 440 aa8.74□□□□□ -1.01
HDA1YNL021W TY1A-PR1P0CX58 440 aa8.74□□□□□ -1.01
HDA1YNL021W TY1A-ORP0CX59 440 aa8.74□□□□□ -1.01
HDA1YNL021W TY1A-PR2P0CX60 440 aa8.74□□□□□ -1.01
HDA1YNL021W TY1A-DR5P0CX65 440 aa8.74□□□□□ -1.01
HDA1YNL021W TY1A-ER2P0CX66 440 aa8.74□□□□□ -1.01
HDA1YNL021W TY1A-GR3P0CX67 440 aa8.74□□□□□ -1.01
HDA1YNL021W TY1A-LR1P0CX68 440 aa8.74□□□□□ -1.01
HDA1YNL021W TY1A-MR2P0CX69 440 aa8.74□□□□□ -1.01
HDA1YNL021W TY1A-JR2P47099 440 aa8.74□□□□□ -1.01
HDA1YNL021W FOL1P53848 824 aa8.74□□□□□ -1.01
HDA1YNL021W TY1A-DR1Q03856 440 aa8.74□□□□□ -1.01
HDA1YNL021W TY1A-ML1Q04706 440 aaKnown RBP8.74□□□□□ -1.01
HDA1YNL021W TY1A-BRQ12217 440 aa8.74□□□□□ -1.01
HDA1YNL021W TY1A-NL2Q12470 440 aa8.74□□□□□ -1.01
HDA1YNL021W TY1A-GR2Q12485 440 aa8.74□□□□□ -1.01
HDA1YNL021W SPF1P39986 1215 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms