RNA–Protein interactions for RNA: YKL185W

ASH1, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene ASH1, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cellular bud, Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASH1YKL185W PCS60P38137 543 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
ASH1YKL185W SMC3P47037 1230 aa6.48□□□□□ -1.37
ASH1YKL185W KRE33P53914 1056 aaKnown RBP6.48□□□□□ -1.37
ASH1YKL185W PML39Q03760 334 aa6.48□□□□□ -1.37
ASH1YKL185W CYC8P14922 966 aa6.47□□□□□ -1.37
ASH1YKL185W TCD1P38756 429 aa6.47□□□□□ -1.37
ASH1YKL185W XKS1P42826 600 aa6.47□□□□□ -1.37
ASH1YKL185W CWH41P53008 833 aa6.47□□□□□ -1.37
ASH1YKL185W YOL057WQ08225 711 aa6.47□□□□□ -1.37
ASH1YKL185W NOP8Q08287 484 aaPredicted RBP6.47□□□□□ -1.37
ASH1YKL185W MRP7P12687 371 aa6.46□□□□□ -1.37
ASH1YKL185W RAD54P32863 898 aa6.46□□□□□ -1.37
ASH1YKL185W MFT1P33441 392 aaKnown RBP6.46□□□□□ -1.37
ASH1YKL185W LTV1P34078 463 aa6.46□□□□□ -1.37
ASH1YKL185W TFG1P41895 735 aaPredicted RBP6.46□□□□□ -1.37
ASH1YKL185W STU2P46675 888 aa6.46□□□□□ -1.37
ASH1YKL185W SFI1Q12369 946 aa6.46□□□□□ -1.37
ASH1YKL185W RAD4P14736 754 aa6.46□□□□□ -1.38
ASH1YKL185W GCD7P32502 381 aaPredicted RBP6.46□□□□□ -1.38
ASH1YKL185W MID1P41821 548 aa6.46□□□□□ -1.38
ASH1YKL185W TIM50Q02776 476 aa6.46□□□□□ -1.38
ASH1YKL185W TCB1Q12466 1186 aa6.46□□□□□ -1.38
ASH1YKL185W COX6P00427 148 aa6.45□□□□□ -1.38
ASH1YKL185W VAS1P07806 1104 aaKnown RBP6.45□□□□□ -1.38
ASH1YKL185W CDC16P09798 840 aa6.45□□□□□ -1.38
ASH1YKL185W SWC3P31376 625 aa6.45□□□□□ -1.38
ASH1YKL185W BOI2P39969 1040 aa6.45□□□□□ -1.38
ASH1YKL185W SSL2Q00578 843 aa6.45□□□□□ -1.38
ASH1YKL185W YDR306CQ06640 478 aa6.45□□□□□ -1.38
ASH1YKL185W INP54Q08227 384 aaKnown RBP6.45□□□□□ -1.38
ASH1YKL185W RSF2P46974 1380 aa6.45□□□□□ -1.38
ASH1YKL185W TRL1P09880 827 aaKnown RBP6.44□□□□□ -1.38
ASH1YKL185W MNR2P35724 969 aa6.44□□□□□ -1.38
ASH1YKL185W MRPL10P36520 322 aa6.44□□□□□ -1.38
ASH1YKL185W SLI15P38283 698 aa6.44□□□□□ -1.38
ASH1YKL185W KIC1P38692 1080 aa6.44□□□□□ -1.38
ASH1YKL185W KRI1P42846 591 aaKnown RBP6.44□□□□□ -1.38
ASH1YKL185W ALE1Q08548 619 aa6.44□□□□□ -1.38
ASH1YKL185W CLB5P30283 435 aa6.44□□□□□ -1.38
ASH1YKL185W DSF2P38213 736 aa6.44□□□□□ -1.38
ASH1YKL185W PBY1P38254 753 aa6.44□□□□□ -1.38
ASH1YKL185W CIN4P39110 191 aa6.44□□□□□ -1.38
ASH1YKL185W HYR1P40581 163 aaKnown RBP6.44□□□□□ -1.38
ASH1YKL185W ZDS2P54786 942 aa6.44□□□□□ -1.38
ASH1YKL185W RIM15P43565 1770 aa6.43□□□□□ -1.38
ASH1YKL185W SES1P07284 462 aaKnown RBP6.43□□□□□ -1.38
ASH1YKL185W BDP1P46678 594 aa6.43□□□□□ -1.38
ASH1YKL185W PEX19Q07418 342 aa6.43□□□□□ -1.38
ASH1YKL185W RNA1P11745 407 aaKnown RBP6.42□□□□□ -1.38
ASH1YKL185W SAP30P38429 201 aa6.42□□□□□ -1.38
ASH1YKL185W VPS60Q03390 229 aa6.42□□□□□ -1.38
ASH1YKL185W YDL129WQ07555 291 aa6.42□□□□□ -1.38
ASH1YKL185W NUP133P36161 1157 aa6.41□□□□□ -1.38
ASH1YKL185W YJL171CP46992 396 aa6.41□□□□□ -1.38
ASH1YKL185W HGH1P48362 394 aaKnown RBP6.41□□□□□ -1.38
ASH1YKL185W UTP13Q05946 817 aaKnown RBP6.41□□□□□ -1.38
ASH1YKL185W MAM3Q12296 706 aa6.41□□□□□ -1.38
ASH1YKL185W UTP10P42945 1769 aaKnown RBP6.41□□□□□ -1.38
ASH1YKL185W SWI1P09547 1314 aa6.41□□□□□ -1.38
ASH1YKL185W MPE1P35728 441 aaKnown RBP6.41□□□□□ -1.38
ASH1YKL185W CEP3P40969 608 aa6.4□□□□□ -1.38
ASH1YKL185W ADE16P54113 591 aaKnown RBP6.4□□□□□ -1.38
ASH1YKL185W DNM1P54861 757 aa6.4□□□□□ -1.38
ASH1YKL185W TRS33Q99394 268 aa6.4□□□□□ -1.38
ASH1YKL185W CLB1P24868 471 aa6.39□□□□□ -1.39
ASH1YKL185W NPR3P38742 1146 aa6.39□□□□□ -1.39
ASH1YKL185W CCT5P40413 562 aaKnown RBP6.39□□□□□ -1.39
ASH1YKL185W CST6P40535 587 aa6.39□□□□□ -1.39
ASH1YKL185W MEC3Q02574 474 aa6.39□□□□□ -1.39
ASH1YKL185W FPR4Q06205 392 aaPredicted RBP6.39□□□□□ -1.39
ASH1YKL185W BMT6Q12291 365 aa6.39□□□□□ -1.39
ASH1YKL185W NOP14Q99207 810 aaKnown RBP6.39□□□□□ -1.39
ASH1YKL185W TAF13P11747 167 aa6.39□□□□□ -1.39
ASH1YKL185W FRS2P15625 503 aaKnown RBP6.39□□□□□ -1.39
ASH1YKL185W DEP1P31385 405 aa6.39□□□□□ -1.39
ASH1YKL185W IES2P40154 320 aa6.39□□□□□ -1.39
ASH1YKL185W CWC22P53333 577 aaKnown RBP6.39□□□□□ -1.39
ASH1YKL185W RMD1Q03441 430 aa6.39□□□□□ -1.39
ASH1YKL185W RPL19AP0CX82 189 aaKnown RBP6.38□□□□□ -1.39
ASH1YKL185W RPL19BP0CX83 189 aaPredicted RBP6.38□□□□□ -1.39
ASH1YKL185W OSM1P21375 501 aaKnown RBP6.38□□□□□ -1.39
ASH1YKL185W PRX1P34227 261 aaKnown RBP6.38□□□□□ -1.39
ASH1YKL185W SGD1Q06132 899 aa6.38□□□□□ -1.39
ASH1YKL185W CDC73Q06697 393 aa6.38□□□□□ -1.39
ASH1YKL185W PDR18P53756 1333 aa6.37□□□□□ -1.39
ASH1YKL185W ATE1P16639 503 aa6.37□□□□□ -1.39
ASH1YKL185W YJR008WP47085 338 aa6.37□□□□□ -1.39
ASH1YKL185W PEX14P53112 341 aa6.37□□□□□ -1.39
ASH1YKL185W PEX29Q03370 554 aa6.37□□□□□ -1.39
ASH1YKL185W NCB2Q92317 146 aa6.37□□□□□ -1.39
ASH1YKL185W LPD1P09624 499 aaKnown RBP6.36□□□□□ -1.39
ASH1YKL185W MBR1P23493 339 aa6.36□□□□□ -1.39
ASH1YKL185W SWE1P32944 819 aa6.36□□□□□ -1.39
ASH1YKL185W ECM21P38167 1117 aaKnown RBP6.36□□□□□ -1.39
ASH1YKL185W UBP12P39538 1254 aa6.36□□□□□ -1.39
ASH1YKL185W PRP31P49704 494 aaPredicted RBP6.36□□□□□ -1.39
ASH1YKL185W FRK1Q03002 865 aaPredicted RBP6.36□□□□□ -1.39
ASH1YKL185W RMT2Q03305 412 aa6.36□□□□□ -1.39
ASH1YKL185W VPS64Q03944 604 aa6.36□□□□□ -1.39
ASH1YKL185W MPC54Q08550 464 aa6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms