RNA–Protein interactions for RNA: YKL113C

RAD27, Transcript of 5' to 3' exonuclease, 5' flap endonuclease, yeast

Gene RAD27, Length 1,149 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD27	YKL113C	DNM1	P54861	757 aa		5.12	□□□□□ -1.59
RAD27	YKL113C	MEC3	Q02574	474 aa		5.12	□□□□□ -1.59
RAD27	YKL113C	NOP8	Q08287	484 aa	Predicted RBP	5.12	□□□□□ -1.59
RAD27	YKL113C	ENT1	Q12518	454 aa		5.12	□□□□□ -1.59
RAD27	YKL113C	RSF2	P46974	1380 aa		5.12	□□□□□ -1.59
RAD27	YKL113C	CDC16	P09798	840 aa		5.11	□□□□□ -1.59
RAD27	YKL113C	MRP7	P12687	371 aa		5.11	□□□□□ -1.59
RAD27	YKL113C	PCT1	P13259	424 aa		5.11	□□□□□ -1.59
RAD27	YKL113C	RFC1	P38630	861 aa	Known RBP	5.11	□□□□□ -1.59
RAD27	YKL113C	SPO1	P53541	631 aa		5.11	□□□□□ -1.59
RAD27	YKL113C	EAF7	P53911	425 aa	Known RBP	5.11	□□□□□ -1.59
RAD27	YKL113C	NKP2	Q06162	153 aa		5.11	□□□□□ -1.59
RAD27	YKL113C	YEL077C	Q3E7X8	1277 aa		5.11	□□□□□ -1.59
RAD27	YKL113C	RAD50	P12753	1312 aa		5.11	□□□□□ -1.59
RAD27	YKL113C	CLC1	P17891	233 aa		5.1	□□□□□ -1.59
RAD27	YKL113C	RAD24	P32641	659 aa		5.1	□□□□□ -1.59
RAD27	YKL113C	BOI2	P39969	1040 aa		5.1	□□□□□ -1.59
RAD27	YKL113C	CST6	P40535	587 aa		5.1	□□□□□ -1.59
RAD27	YKL113C	ATF2	P53296	535 aa		5.1	□□□□□ -1.59
RAD27	YKL113C	RLP24	Q07915	199 aa	Known RBP	5.1	□□□□□ -1.59
RAD27	YKL113C	KIN1	P13185	1064 aa		5.09	□□□□□ -1.59
RAD27	YKL113C	RAD54	P32863	898 aa		5.09	□□□□□ -1.59
RAD27	YKL113C	VPS24	P36095	224 aa	Known RBP	5.09	□□□□□ -1.59
RAD27	YKL113C	NMD2	P38798	1089 aa	Known RBP	5.09	□□□□□ -1.59
RAD27	YKL113C	SNF7	P39929	240 aa	Known RBP	5.09	□□□□□ -1.59
RAD27	YKL113C	NUP42	P49686	430 aa	Known RBP	5.09	□□□□□ -1.59
RAD27	YKL113C	YGR122W	P53272	402 aa		5.09	□□□□□ -1.59
RAD27	YKL113C	ADE16	P54113	591 aa	Known RBP	5.09	□□□□□ -1.59
RAD27	YKL113C	YPL062W	Q02781	134 aa		5.09	□□□□□ -1.59
RAD27	YKL113C	ENV9	Q08651	330 aa		5.09	□□□□□ -1.59
RAD27	YKL113C	LSP1	Q12230	341 aa	Known RBP	5.09	□□□□□ -1.59
RAD27	YKL113C	YKL133C	P36066	463 aa		5.08	□□□□□ -1.6
RAD27	YKL113C	ZDS2	P54786	942 aa		5.08	□□□□□ -1.6
RAD27	YKL113C	GCR2	Q01722	534 aa		5.08	□□□□□ -1.6
RAD27	YKL113C	ALE1	Q08548	619 aa		5.08	□□□□□ -1.6
RAD27	YKL113C	ROX1	P25042	368 aa		5.07	□□□□□ -1.6
RAD27	YKL113C	SWC3	P31376	625 aa		5.07	□□□□□ -1.6
RAD27	YKL113C	GLC3	P32775	704 aa		5.07	□□□□□ -1.6
RAD27	YKL113C	DLD1	P32891	587 aa		5.07	□□□□□ -1.6
RAD27	YKL113C	UBP12	P39538	1254 aa		5.07	□□□□□ -1.6
RAD27	YKL113C	AIR1	P40507	360 aa	Known RBP	5.07	□□□□□ -1.6
RAD27	YKL113C	DMA2	P53924	522 aa		5.07	□□□□□ -1.6
RAD27	YKL113C	ATG13	Q06628	738 aa		5.07	□□□□□ -1.6
RAD27	YKL113C	BUD20	Q08004	166 aa	Predicted RBP	5.07	□□□□□ -1.6
RAD27	YKL113C	ROM2	P51862	1356 aa	Known RBP	5.06	□□□□□ -1.6
RAD27	YKL113C	SWI1	P09547	1314 aa		5.06	□□□□□ -1.6
RAD27	YKL113C	RPP1B	P10622	106 aa	Known RBP	5.06	□□□□□ -1.6
RAD27	YKL113C	DIT2	P21595	489 aa		5.06	□□□□□ -1.6
RAD27	YKL113C	BRN1	P38170	754 aa		5.06	□□□□□ -1.6
RAD27	YKL113C	YBP2	P53169	641 aa		5.06	□□□□□ -1.6
RAD27	YKL113C	RMT2	Q03305	412 aa		5.06	□□□□□ -1.6
RAD27	YKL113C	YRR1	Q12172	810 aa		5.06	□□□□□ -1.6
RAD27	YKL113C	GIN4	Q12263	1142 aa		5.06	□□□□□ -1.6
RAD27	YKL113C	RIM15	P43565	1770 aa		5.06	□□□□□ -1.6
RAD27	YKL113C	DUR1,2	P32528	1835 aa	Known RBP	5.05	□□□□□ -1.6
RAD27	YKL113C	PRT1	P06103	763 aa	Known RBP	5.05	□□□□□ -1.6
RAD27	YKL113C	VAS1	P07806	1104 aa	Known RBP	5.05	□□□□□ -1.6
RAD27	YKL113C	LPD1	P09624	499 aa	Known RBP	5.05	□□□□□ -1.6
RAD27	YKL113C	MSP1	P28737	362 aa		5.05	□□□□□ -1.6
RAD27	YKL113C	NUP133	P36161	1157 aa		5.05	□□□□□ -1.6
RAD27	YKL113C	SSF1	P38789	453 aa	Predicted RBP	5.05	□□□□□ -1.6
RAD27	YKL113C	STR2	P47164	639 aa		5.05	□□□□□ -1.6
RAD27	YKL113C	SSP2	Q08646	371 aa		5.05	□□□□□ -1.6
RAD27	YKL113C	TUM1	Q08686	304 aa	Known RBP	5.05	□□□□□ -1.6
RAD27	YKL113C	PHM7	Q12252	991 aa		5.05	□□□□□ -1.6
RAD27	YKL113C	RLF2	Q12495	606 aa		5.05	□□□□□ -1.6
RAD27	YKL113C	HSP82	P02829	709 aa	Known RBP	5.04	□□□□□ -1.6
RAD27	YKL113C	GAR1	P28007	205 aa	Known RBP	5.04	□□□□□ -1.6
RAD27	YKL113C	MRF1	P30775	413 aa	Predicted RBP	5.04	□□□□□ -1.6
RAD27	YKL113C	PSE1	P32337	1089 aa	Known RBP	5.04	□□□□□ -1.6
RAD27	YKL113C	BRL1	P38770	471 aa		5.04	□□□□□ -1.6
RAD27	YKL113C	NUG1	P40010	520 aa	Known RBP	5.04	□□□□□ -1.6
RAD27	YKL113C	CLA4	P48562	842 aa		5.04	□□□□□ -1.6
RAD27	YKL113C	ITC1	P53125	1264 aa		5.04	□□□□□ -1.6
RAD27	YKL113C	ENV11	P53246	860 aa		5.04	□□□□□ -1.6
RAD27	YKL113C	APP1	P53933	587 aa		5.04	□□□□□ -1.6
RAD27	YKL113C	FRK1	Q03002	865 aa	Predicted RBP	5.04	□□□□□ -1.6
RAD27	YKL113C	YDR090C	Q03193	310 aa		5.04	□□□□□ -1.6
RAD27	YKL113C	YPR204W	Q08995	1032 aa		5.04	□□□□□ -1.6
RAD27	YKL113C	PLP2	Q12017	286 aa		5.04	□□□□□ -1.6
RAD27	YKL113C	HIF1	Q12373	385 aa		5.04	□□□□□ -1.6
RAD27	YKL113C	NCB2	Q92317	146 aa		5.04	□□□□□ -1.6
RAD27	YKL113C	SRS2	P12954	1174 aa		5.03	□□□□□ -1.6
RAD27	YKL113C	GRX1	P25373	110 aa	Known RBP	5.03	□□□□□ -1.6
RAD27	YKL113C	TOA1	P32773	286 aa		5.03	□□□□□ -1.6
RAD27	YKL113C	RPS0A	P32905	252 aa	Known RBP	5.03	□□□□□ -1.6
RAD27	YKL113C	HXT13	P39924	564 aa		5.03	□□□□□ -1.6
RAD27	YKL113C	BRE2	P43132	505 aa		5.03	□□□□□ -1.6
RAD27	YKL113C	BDP1	P46678	594 aa		5.03	□□□□□ -1.6
RAD27	YKL113C	TEA1	P47988	759 aa		5.03	□□□□□ -1.6
RAD27	YKL113C	COB	P00163	385 aa		5.02	□□□□□ -1.61
RAD27	YKL113C	SUP35	P05453	685 aa	Known RBP	5.02	□□□□□ -1.61
RAD27	YKL113C	NOT3	P06102	836 aa	Known RBP	5.02	□□□□□ -1.61
RAD27	YKL113C	ERG12	P07277	443 aa		5.02	□□□□□ -1.61
RAD27	YKL113C	TRL1	P09880	827 aa	Known RBP	5.02	□□□□□ -1.61
RAD27	YKL113C	APL2	P36000	726 aa	Predicted RBP	5.02	□□□□□ -1.61
RAD27	YKL113C	ECM21	P38167	1117 aa	Known RBP	5.02	□□□□□ -1.61
RAD27	YKL113C	DOT5	P40553	215 aa		5.02	□□□□□ -1.61
RAD27	YKL113C	DJP1	P40564	432 aa		5.02	□□□□□ -1.61
RAD27	YKL113C	ISM1	P48526	1002 aa		5.02	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 53.1 ms