RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	SULF1	Q8IWU6	871 aa		10.34	□□□□□ -0.75
CASC19-238	ENST00000641523	RAPGEF2	Q9Y4G8	1499 aa		10.33	□□□□□ -0.76
CASC19-238	ENST00000641523	RFC5	P40937	340 aa		10.32	□□□□□ -0.76
CASC19-238	ENST00000641523	RANGAP1	P46060	587 aa	Predicted RBP	10.32	□□□□□ -0.76
CASC19-238	ENST00000641523	IQGAP2	Q13576	1575 aa		10.31	□□□□□ -0.76
CASC19-238	ENST00000641523	MAPKBP1	O60336	1514 aa		10.31	□□□□□ -0.76
CASC19-238	ENST00000641523	PTPRG	P23470	1445 aa		10.31	□□□□□ -0.76
CASC19-238	ENST00000641523	TNIK	Q9UKE5	1360 aa		10.31	□□□□□ -0.76
CASC19-238	ENST00000641523	TRAK2	O60296	914 aa		10.31	□□□□□ -0.76
CASC19-238	ENST00000641523	KIAA1468	Q9P260	1216 aa		10.31	□□□□□ -0.76
CASC19-238	ENST00000641523	MOXD2P	A6NHM9	499 aa		10.31	□□□□□ -0.76
CASC19-238	ENST00000641523	SPTLC1	O15269	473 aa		10.31	□□□□□ -0.76
CASC19-238	ENST00000641523	PSEN2	P49810	448 aa		10.31	□□□□□ -0.76
CASC19-238	ENST00000641523	CSPP1	Q1MSJ5	1256 aa		10.31	□□□□□ -0.76
CASC19-238	ENST00000641523	OTUD5	Q96G74	571 aa		10.31	□□□□□ -0.76
CASC19-238	ENST00000641523	POM121	Q96HA1	1249 aa		10.31	□□□□□ -0.76
CASC19-238	ENST00000641523	SNRK	Q9NRH2	765 aa		10.31	□□□□□ -0.76
CASC19-238	ENST00000641523	NDUFV2	P19404	249 aa		10.3	□□□□□ -0.76
CASC19-238	ENST00000641523	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.3	□□□□□ -0.76
CASC19-238	ENST00000641523	RDH13	Q8NBN7	331 aa		10.3	□□□□□ -0.76
CASC19-238	ENST00000641523	ZBED2	Q9BTP6	218 aa		10.3	□□□□□ -0.76
CASC19-238	ENST00000641523	KCNH8	Q96L42	1107 aa		10.29	□□□□□ -0.76
CASC19-238	ENST00000641523	PPP2R2D	Q66LE6	453 aa		10.28	□□□□□ -0.76
CASC19-238	ENST00000641523	ABCC10	Q5T3U5	1492 aa		10.28	□□□□□ -0.76
CASC19-238	ENST00000641523	ADCY10	Q96PN6	1610 aa		10.28	□□□□□ -0.76
CASC19-238	ENST00000641523	SPDYE5	A6NIY4	337 aa		10.27	□□□□□ -0.76
CASC19-238	ENST00000641523	BANK1	Q8NDB2	785 aa		10.27	□□□□□ -0.76
CASC19-238	ENST00000641523	PCDHB15	Q9Y5E8	787 aa		10.27	□□□□□ -0.76
CASC19-238	ENST00000641523	FAM69C	Q0P6D2	419 aa		10.26	□□□□□ -0.77
CASC19-238	ENST00000641523	TMEM259	Q4ZIN3	620 aa		10.26	□□□□□ -0.77
CASC19-238	ENST00000641523	UGGT2	Q9NYU1	1516 aa		10.26	□□□□□ -0.77
CASC19-238	ENST00000641523	QPCT	Q16769	361 aa		10.26	□□□□□ -0.77
CASC19-238	ENST00000641523	TUSC1	Q2TAM9	212 aa		10.26	□□□□□ -0.77
CASC19-238	ENST00000641523	POTEE	Q6S8J3	1075 aa		10.26	□□□□□ -0.77
CASC19-238	ENST00000641523	PODXL2	Q9NZ53	605 aa		10.26	□□□□□ -0.77
CASC19-238	ENST00000641523	ABCC2	Q92887	1545 aa		10.25	□□□□□ -0.77
CASC19-238	ENST00000641523	RAD21	O60216	631 aa		10.25	□□□□□ -0.77
CASC19-238	ENST00000641523	PROSER2	Q86WR7	435 aa	Predicted RBP	10.25	□□□□□ -0.77
CASC19-238	ENST00000641523	UHRF1BP1L	A0JNW5	1464 aa		10.24	□□□□□ -0.77
CASC19-238	ENST00000641523	GOLGA3	Q08378	1498 aa		10.24	□□□□□ -0.77
CASC19-238	ENST00000641523	ERBB3	P21860	1342 aa		10.24	□□□□□ -0.77
CASC19-238	ENST00000641523	KDM4A	O75164	1064 aa		10.24	□□□□□ -0.77
CASC19-238	ENST00000641523	VARS2	Q5ST30	1063 aa	Known RBP	10.24	□□□□□ -0.77
CASC19-238	ENST00000641523	SWT1	Q5T5J6	900 aa	Known RBP	10.24	□□□□□ -0.77
CASC19-238	ENST00000641523	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.24	□□□□□ -0.77
CASC19-238	ENST00000641523	ZNF777	Q9ULD5	760 aa	Predicted RBP	10.24	□□□□□ -0.77
CASC19-238	ENST00000641523	AXIN2	Q9Y2T1	843 aa		10.24	□□□□□ -0.77
CASC19-238	ENST00000641523	COG6	Q9Y2V7	657 aa		10.24	□□□□□ -0.77
CASC19-238	ENST00000641523	UACA	Q9BZF9	1416 aa		10.23	□□□□□ -0.77
CASC19-238	ENST00000641523	DISP1	Q96F81	1524 aa		10.23	□□□□□ -0.77
CASC19-238	ENST00000641523	ARHGAP33	O14559	1287 aa		10.23	□□□□□ -0.77
CASC19-238	ENST00000641523	SLC10A3	P09131	477 aa		10.23	□□□□□ -0.77
CASC19-238	ENST00000641523	DMRTA1	Q5VZB9	504 aa		10.23	□□□□□ -0.77
CASC19-238	ENST00000641523	FAM9A	Q8IZU1	332 aa	Predicted RBP	10.23	□□□□□ -0.77
CASC19-238	ENST00000641523	KIF13A	Q9H1H9	1805 aa		10.23	□□□□□ -0.77
CASC19-238	ENST00000641523	PLB1	Q6P1J6	1458 aa		10.23	□□□□□ -0.77
CASC19-238	ENST00000641523	PRX	Q9BXM0	1461 aa		10.23	□□□□□ -0.77
CASC19-238	ENST00000641523	DIP2B	Q9P265	1576 aa		10.23	□□□□□ -0.77
CASC19-238	ENST00000641523	LILRB3	O75022	631 aa		10.22	□□□□□ -0.77
CASC19-238	ENST00000641523	GCGR	P47871	477 aa		10.22	□□□□□ -0.77
CASC19-238	ENST00000641523	RTL5	Q5HYW3	569 aa	Predicted RBP	10.22	□□□□□ -0.77
CASC19-238	ENST00000641523	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.22	□□□□□ -0.77
CASC19-238	ENST00000641523	CABLES1	Q8TDN4	633 aa		10.22	□□□□□ -0.77
CASC19-238	ENST00000641523	RABGEF1	Q9UJ41	708 aa		10.22	□□□□□ -0.77
CASC19-238	ENST00000641523	TTBK1	Q5TCY1	1321 aa	Predicted RBP	10.22	□□□□□ -0.77
CASC19-238	ENST00000641523	GJA5	P36382	358 aa		10.22	□□□□□ -0.77
CASC19-238	ENST00000641523	EEA1	Q15075	1411 aa		10.21	□□□□□ -0.77
CASC19-238	ENST00000641523	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.21	□□□□□ -0.78
CASC19-238	ENST00000641523	NUTM2E	B1AL46	878 aa	Predicted RBP	10.21	□□□□□ -0.78
CASC19-238	ENST00000641523	RSPH4A	Q5TD94	716 aa		10.21	□□□□□ -0.78
CASC19-238	ENST00000641523	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.21	□□□□□ -0.78
CASC19-238	ENST00000641523	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.21	□□□□□ -0.78
CASC19-238	ENST00000641523	CCDC82	Q8N4S0	544 aa		10.21	□□□□□ -0.78
CASC19-238	ENST00000641523	KIAA0556	O60303	1618 aa		10.21	□□□□□ -0.78
CASC19-238	ENST00000641523	AP1G2	O75843	785 aa		10.2	□□□□□ -0.78
CASC19-238	ENST00000641523	MTMR14	Q8NCE2	650 aa		10.2	□□□□□ -0.78
CASC19-238	ENST00000641523	CTTNBP2	Q8WZ74	1663 aa		10.19	□□□□□ -0.78
CASC19-238	ENST00000641523	HOXA2	O43364	376 aa		10.19	□□□□□ -0.78
CASC19-238	ENST00000641523	KDM5B	Q9UGL1	1544 aa		10.19	□□□□□ -0.78
CASC19-238	ENST00000641523	USP46	P62068	366 aa		10.18	□□□□□ -0.78
CASC19-238	ENST00000641523	GUCA2A	Q02747	115 aa		10.18	□□□□□ -0.78
CASC19-238	ENST00000641523	ASXL2	Q76L83	1435 aa		10.18	□□□□□ -0.78
CASC19-238	ENST00000641523	HLA-C	Q95604	372 aa		10.18	□□□□□ -0.78
CASC19-238	ENST00000641523	SLC4A5	Q9BY07	1137 aa		10.18	□□□□□ -0.78
CASC19-238	ENST00000641523	FDX1	P10109	184 aa		10.18	□□□□□ -0.78
CASC19-238	ENST00000641523	HRC	P23327	699 aa		10.17	□□□□□ -0.78
CASC19-238	ENST00000641523	HDGF	P51858	240 aa	Known RBP	10.17	□□□□□ -0.78
CASC19-238	ENST00000641523	MARVELD3	Q96A59	401 aa		10.17	□□□□□ -0.78
CASC19-238	ENST00000641523	GDPD2	Q9HCC8	539 aa		10.17	□□□□□ -0.78
CASC19-238	ENST00000641523	PCDHGC3	Q9UN70	934 aa		10.17	□□□□□ -0.78
CASC19-238	ENST00000641523	VPS9D1	Q9Y2B5	631 aa		10.17	□□□□□ -0.78
CASC19-238	ENST00000641523	GLI2	P10070	1586 aa		10.16	□□□□□ -0.78
CASC19-238	ENST00000641523	ST18	O60284	1047 aa		10.16	□□□□□ -0.78
CASC19-238	ENST00000641523	PRPF38B	Q5VTL8	546 aa	Known RBP	10.16	□□□□□ -0.78
CASC19-238	ENST00000641523	EMP3	P54852	163 aa		10.15	□□□□□ -0.78
CASC19-238	ENST00000641523	FAM98C	Q17RN3	349 aa	Known RBP	10.15	□□□□□ -0.78
CASC19-238	ENST00000641523	ZBTB3	Q9H5J0	574 aa		10.15	□□□□□ -0.78
CASC19-238	ENST00000641523	LHX8	Q68G74	356 aa		10.14	□□□□□ -0.79
CASC19-238	ENST00000641523	SAMD7	Q7Z3H4	446 aa		10.14	□□□□□ -0.79
CASC19-238	ENST00000641523	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.14	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms