RNA–Protein interactions for RNA: ENST00000640765.1

TRPS1-212, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2 BASIC

Gene TRPS1, Length 9,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-212ENST00000640765 V9GYY5 206 aaPredicted RBP10.11□□□□□ -0.79
TRPS1-212ENST00000640765 PDE3BQ13370 1112 aa10.11□□□□□ -0.79
TRPS1-212ENST00000640765 CRACR2AQ9BSW2 395 aa10.11□□□□□ -0.79
TRPS1-212ENST00000640765 ANKRD18BA2A2Z9 1011 aa10.11□□□□□ -0.79
TRPS1-212ENST00000640765 KIF3CO14782 793 aa10.11□□□□□ -0.79
TRPS1-212ENST00000640765 TNNT1P13805 278 aa10.11□□□□□ -0.79
TRPS1-212ENST00000640765 CGNQ9P2M7 1197 aaKnown RBP10.11□□□□□ -0.79
TRPS1-212ENST00000640765 SMC3Q9UQE7 1217 aa10.11□□□□□ -0.79
TRPS1-212ENST00000640765 CEP162Q5TB80 1403 aa10.1□□□□□ -0.79
TRPS1-212ENST00000640765 FRAT2O75474 233 aaPredicted RBP10.1□□□□□ -0.79
TRPS1-212ENST00000640765 FBXW7Q969H0 707 aa10.1□□□□□ -0.79
TRPS1-212ENST00000640765 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.1□□□□□ -0.79
TRPS1-212ENST00000640765 FAM193AP78312 1265 aa10.1□□□□□ -0.79
TRPS1-212ENST00000640765 TIGD1Q96MW7 591 aa10.1□□□□□ -0.79
TRPS1-212ENST00000640765 MNAT1P51948 309 aa10.1□□□□□ -0.79
TRPS1-212ENST00000640765 TRDNQ13061 729 aa10.1□□□□□ -0.79
TRPS1-212ENST00000640765 SDF4Q9BRK5 362 aa10.1□□□□□ -0.79
TRPS1-212ENST00000640765 PDCL3Q9H2J4 239 aa10.1□□□□□ -0.79
TRPS1-212ENST00000640765 ZWINTO95229 277 aa10.1□□□□□ -0.79
TRPS1-212ENST00000640765 SUDS3Q9H7L9 328 aaPredicted RBP10.1□□□□□ -0.79
TRPS1-212ENST00000640765 ERICH2A1L162 156 aa10.09□□□□□ -0.79
TRPS1-212ENST00000640765 PAF1Q8N7H5 531 aa10.09□□□□□ -0.79
TRPS1-212ENST00000640765 NFKBIBQ15653 356 aa10.09□□□□□ -0.79
TRPS1-212ENST00000640765 ROCK1Q13464 1354 aa10.08□□□□□ -0.8
TRPS1-212ENST00000640765 BMS1Q14692 1282 aaKnown RBP10.08□□□□□ -0.8
TRPS1-212ENST00000640765 ABCC9O60706 1549 aa10.08□□□□□ -0.8
TRPS1-212ENST00000640765 KIF2AO00139 706 aaPredicted RBP10.08□□□□□ -0.8
TRPS1-212ENST00000640765 TRIM34Q9BYJ4 488 aa10.08□□□□□ -0.8
TRPS1-212ENST00000640765 XBP1P17861 261 aa10.08□□□□□ -0.8
TRPS1-212ENST00000640765 VPS37CA5D8V6 355 aaPredicted RBP10.08□□□□□ -0.8
TRPS1-212ENST00000640765 DNAAF4Q8WXU2 420 aa10.08□□□□□ -0.8
TRPS1-212ENST00000640765 LRRFIP2Q9Y608 721 aaKnown RBP10.08□□□□□ -0.8
TRPS1-212ENST00000640765 BBXQ8WY36 941 aaPredicted RBP10.08□□□□□ -0.8
TRPS1-212ENST00000640765 GIGYF2Q6Y7W6 1299 aaKnown RBP10.07□□□□□ -0.8
TRPS1-212ENST00000640765 NOL10Q9BSC4 688 aaKnown RBP10.07□□□□□ -0.8
TRPS1-212ENST00000640765 CTDP1Q9Y5B0 961 aaPredicted RBP10.07□□□□□ -0.8
TRPS1-212ENST00000640765 ANO2Q9NQ90 1003 aa10.07□□□□□ -0.8
TRPS1-212ENST00000640765 C6orf163Q5TEZ5 329 aa10.07□□□□□ -0.8
TRPS1-212ENST00000640765 CTR9Q6PD62 1173 aa10.07□□□□□ -0.8
TRPS1-212ENST00000640765 DDX46Q7L014 1031 aaKnown RBP10.07□□□□□ -0.8
TRPS1-212ENST00000640765 ANKRD45Q5TZF3 282 aa10.07□□□□□ -0.8
TRPS1-212ENST00000640765 KANK1Q14678 1352 aa10.07□□□□□ -0.8
TRPS1-212ENST00000640765 TDO2P48775 406 aa10.07□□□□□ -0.8
TRPS1-212ENST00000640765 SRPK2P78362 688 aaKnown RBP10.07□□□□□ -0.8
TRPS1-212ENST00000640765 PPFIBP1Q86W92 1011 aa10.07□□□□□ -0.8
TRPS1-212ENST00000640765 DESP17661 470 aa10.06□□□□□ -0.8
TRPS1-212ENST00000640765 GCOM1H8Y6P7 765 aaPredicted RBP10.06□□□□□ -0.8
TRPS1-212ENST00000640765 VGFO15240 615 aaPredicted RBP10.06□□□□□ -0.8
TRPS1-212ENST00000640765 MYZAPP0CAP1 466 aa10.06□□□□□ -0.8
TRPS1-212ENST00000640765 CCDC192P0DO97 292 aa10.06□□□□□ -0.8
TRPS1-212ENST00000640765 TRAK2O60296 914 aa10.06□□□□□ -0.8
TRPS1-212ENST00000640765 SLC4A3P48751 1232 aa10.06□□□□□ -0.8
TRPS1-212ENST00000640765 SMC1AQ14683 1233 aaKnown RBP10.06□□□□□ -0.8
TRPS1-212ENST00000640765 PDCP20941 246 aa10.06□□□□□ -0.8
TRPS1-212ENST00000640765 SLC4A10Q6U841 1118 aa10.06□□□□□ -0.8
TRPS1-212ENST00000640765 SPECC1LQ69YQ0 1117 aa10.06□□□□□ -0.8
TRPS1-212ENST00000640765 NAP1L3Q99457 506 aaPredicted RBP10.06□□□□□ -0.8
TRPS1-212ENST00000640765 WWC2Q6AWC2 1192 aa10.05□□□□□ -0.8
TRPS1-212ENST00000640765 INTS3Q68E01 1043 aaKnown RBP10.05□□□□□ -0.8
TRPS1-212ENST00000640765 DACH1Q9UI36 760 aa10.05□□□□□ -0.8
TRPS1-212ENST00000640765 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.05□□□□□ -0.8
TRPS1-212ENST00000640765 PLEKHD1A6NEE1 506 aa10.05□□□□□ -0.8
TRPS1-212ENST00000640765 U2AF1L5P0DN76 240 aaPredicted RBP10.05□□□□□ -0.8
TRPS1-212ENST00000640765 U2AF1Q01081 240 aaKnown RBP eCLIP10.05□□□□□ -0.8
TRPS1-212ENST00000640765 CCDC148Q8NFR7 591 aa10.05□□□□□ -0.8
TRPS1-212ENST00000640765 UBXN4Q92575 508 aa10.05□□□□□ -0.8
TRPS1-212ENST00000640765 CBFA2T2O43439 604 aa10.05□□□□□ -0.8
TRPS1-212ENST00000640765 SPC24Q8NBT2 197 aa10.05□□□□□ -0.8
TRPS1-212ENST00000640765 STIM1Q13586 685 aa10.05□□□□□ -0.8
TRPS1-212ENST00000640765 GRIPAP1Q4V328 841 aa10.05□□□□□ -0.8
TRPS1-212ENST00000640765 NFXL1Q6ZNB6 911 aa10.04□□□□□ -0.8
TRPS1-212ENST00000640765 PABPN1Q86U42 306 aaKnown RBP eCLIP10.04□□□□□ -0.8
TRPS1-212ENST00000640765 E9PSI1 815 aa10.04□□□□□ -0.8
TRPS1-212ENST00000640765 JAKMIP3Q5VZ66 844 aa10.04□□□□□ -0.8
TRPS1-212ENST00000640765 ROCK2O75116 1388 aaKnown RBP10.04□□□□□ -0.8
TRPS1-212ENST00000640765 SARNPP82979 210 aaKnown RBP10.04□□□□□ -0.8
TRPS1-212ENST00000640765 TCHPQ9BT92 498 aa10.04□□□□□ -0.8
TRPS1-212ENST00000640765 HDGFL2Q7Z4V5 671 aaPredicted RBP10.04□□□□□ -0.8
TRPS1-212ENST00000640765 ZNF330Q9Y3S2 320 aaPredicted RBP10.04□□□□□ -0.8
TRPS1-212ENST00000640765 RNF214Q8ND24 703 aa10.04□□□□□ -0.8
TRPS1-212ENST00000640765 CCDC97Q96F63 343 aaPredicted RBP10.04□□□□□ -0.8
TRPS1-212ENST00000640765 SERPINC1P01008 464 aa10.03□□□□□ -0.8
TRPS1-212ENST00000640765 IVLP07476 585 aa10.03□□□□□ -0.8
TRPS1-212ENST00000640765 HSP90AB4PQ58FF6 505 aa10.03□□□□□ -0.8
TRPS1-212ENST00000640765 SOGA3Q5TF21 947 aa10.03□□□□□ -0.8
TRPS1-212ENST00000640765 BRPF3Q9ULD4 1205 aa10.03□□□□□ -0.8
TRPS1-212ENST00000640765 SMARCA2P51531 1590 aa10.03□□□□□ -0.8
TRPS1-212ENST00000640765 RNF187Q5TA31 235 aaPredicted RBP10.03□□□□□ -0.8
TRPS1-212ENST00000640765 GOLGA6L9A6NEM1 432 aa10.02□□□□□ -0.8
TRPS1-212ENST00000640765 DCAF11Q8TEB1 546 aa10.02□□□□□ -0.8
TRPS1-212ENST00000640765 CCDC6Q16204 474 aa10.02□□□□□ -0.8
TRPS1-212ENST00000640765 CEP83Q9Y592 693 aa10.02□□□□□ -0.8
TRPS1-212ENST00000640765 NOL3O60936 208 aaKnown RBP10.02□□□□□ -0.81
TRPS1-212ENST00000640765 NINLQ9Y2I6 1382 aa10.02□□□□□ -0.81
TRPS1-212ENST00000640765 CCDC160A6NGH7 325 aa10.02□□□□□ -0.81
TRPS1-212ENST00000640765 HSPA4P34932 840 aa10.02□□□□□ -0.81
TRPS1-212ENST00000640765 RBM28Q9NW13 759 aaKnown RBP10.02□□□□□ -0.81
TRPS1-212ENST00000640765 ZFYP08048 801 aaPredicted RBP10.02□□□□□ -0.81
TRPS1-212ENST00000640765 MCM2P49736 904 aa10.01□□□□□ -0.81
TRPS1-212ENST00000640765 BRPF1P55201 1214 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms