RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 ERC2O15083 957 aa17.87■□□□□ 0.45
HNRNPU-226ENST00000640218 HSP90AB4PQ58FF6 505 aa17.87■□□□□ 0.45
HNRNPU-226ENST00000640218 PANK1Q8TE04 598 aa17.87■□□□□ 0.45
HNRNPU-226ENST00000640218 CCDC7Q96M83 1385 aa17.87■□□□□ 0.45
HNRNPU-226ENST00000640218 CHMP5Q9NZZ3 219 aa17.87■□□□□ 0.45
HNRNPU-226ENST00000640218 NLRP2Q9NX02 1062 aa17.87■□□□□ 0.45
HNRNPU-226ENST00000640218 ANKRD20A12PQ8NF67 263 aa17.86■□□□□ 0.45
HNRNPU-226ENST00000640218 FGD5Q6ZNL6 1462 aa17.86■□□□□ 0.45
HNRNPU-226ENST00000640218 CCDC70Q6NSX1 233 aa17.86■□□□□ 0.45
HNRNPU-226ENST00000640218 HOOK1Q9UJC3 728 aaKnown RBP17.86■□□□□ 0.45
HNRNPU-226ENST00000640218 MIA2Q96PC5 1412 aa17.86■□□□□ 0.45
HNRNPU-226ENST00000640218 IPO7O95373 1038 aaKnown RBP17.85■□□□□ 0.45
HNRNPU-226ENST00000640218 CCAR1Q8IX12 1150 aaKnown RBP17.85■□□□□ 0.45
HNRNPU-226ENST00000640218 FGD6Q6ZV73 1430 aa17.85■□□□□ 0.45
HNRNPU-226ENST00000640218 RBM33Q96EV2 1170 aaKnown RBP17.85■□□□□ 0.45
HNRNPU-226ENST00000640218 RAD54L2Q9Y4B4 1467 aa17.85■□□□□ 0.45
HNRNPU-226ENST00000640218 FYB1O15117 783 aa17.84■□□□□ 0.45
HNRNPU-226ENST00000640218 WASHC4Q2M389 1173 aa17.84■□□□□ 0.45
HNRNPU-226ENST00000640218 CUX1P39880 1505 aa17.84■□□□□ 0.45
HNRNPU-226ENST00000640218 HSP90AA2PQ14568 343 aaPredicted RBP17.84■□□□□ 0.45
HNRNPU-226ENST00000640218 UBTFL1P0CB47 393 aaPredicted RBP17.84■□□□□ 0.45
HNRNPU-226ENST00000640218 STRN4Q9NRL3 753 aa17.83■□□□□ 0.45
HNRNPU-226ENST00000640218 NLRP6P59044 892 aa17.83■□□□□ 0.44
HNRNPU-226ENST00000640218 CCDC27Q2M243 656 aa17.83■□□□□ 0.44
HNRNPU-226ENST00000640218 C22orf23Q9BZE7 217 aa17.83■□□□□ 0.44
HNRNPU-226ENST00000640218 SASS6Q6UVJ0 657 aa17.82■□□□□ 0.44
HNRNPU-226ENST00000640218 RALYLQ86SE5 291 aaKnown RBP17.82■□□□□ 0.44
HNRNPU-226ENST00000640218 IGF1RP08069 1367 aa17.82■□□□□ 0.44
HNRNPU-226ENST00000640218 HOMER1Q86YM7 354 aa17.82■□□□□ 0.44
HNRNPU-226ENST00000640218 SAFBQ15424 915 aaKnown RBP eCLIP17.81■□□□□ 0.44
HNRNPU-226ENST00000640218 MTHFSP49914 203 aa17.81■□□□□ 0.44
HNRNPU-226ENST00000640218 NUCB2P80303 420 aa17.81■□□□□ 0.44
HNRNPU-226ENST00000640218 FAM177BA6PVY3 158 aa17.8■□□□□ 0.44
HNRNPU-226ENST00000640218 GPS2Q13227 327 aa17.8■□□□□ 0.44
HNRNPU-226ENST00000640218 CCDC43Q96MW1 224 aaKnown RBP17.8■□□□□ 0.44
HNRNPU-226ENST00000640218 ADAMTS8Q9UP79 889 aa17.8■□□□□ 0.44
HNRNPU-226ENST00000640218 STAC3Q96MF2 364 aa17.8■□□□□ 0.44
HNRNPU-226ENST00000640218 CNTLNQ9NXG0 1405 aa17.79■□□□□ 0.44
HNRNPU-226ENST00000640218 ANKRD50Q9ULJ7 1429 aa17.79■□□□□ 0.44
HNRNPU-226ENST00000640218 CCDC73Q6ZRK6 1079 aa17.78■□□□□ 0.44
HNRNPU-226ENST00000640218 KDM4AO75164 1064 aa17.77■□□□□ 0.44
HNRNPU-226ENST00000640218 CDC45O75419 566 aa17.77■□□□□ 0.44
HNRNPU-226ENST00000640218 MTMR7Q9Y216 660 aa17.77■□□□□ 0.44
HNRNPU-226ENST00000640218 ABTB2Q8N961 1025 aa17.77■□□□□ 0.44
HNRNPU-226ENST00000640218 RSPH6AQ9H0K4 717 aa17.77■□□□□ 0.44
HNRNPU-226ENST00000640218 NINLQ9Y2I6 1382 aa17.77■□□□□ 0.43
HNRNPU-226ENST00000640218 ARHGAP5Q13017 1502 aa17.77■□□□□ 0.43
HNRNPU-226ENST00000640218 CNTROBQ8N137 903 aa17.76■□□□□ 0.43
HNRNPU-226ENST00000640218 FANCIQ9NVI1 1328 aa17.76■□□□□ 0.43
HNRNPU-226ENST00000640218 FSD1Q9BTV5 496 aa17.75■□□□□ 0.43
HNRNPU-226ENST00000640218 CFAP70Q5T0N1 1121 aa17.75■□□□□ 0.43
HNRNPU-226ENST00000640218 CCDC30Q5VVM6 783 aa17.75■□□□□ 0.43
HNRNPU-226ENST00000640218 TCP11L2Q8N4U5 519 aa17.75■□□□□ 0.43
HNRNPU-226ENST00000640218 SETQ01105 290 aaPredicted RBP17.74■□□□□ 0.43
HNRNPU-226ENST00000640218 LRRC9Q6ZRR7 1453 aa17.74■□□□□ 0.43
HNRNPU-226ENST00000640218 SURF6O75683 361 aaKnown RBP17.74■□□□□ 0.43
HNRNPU-226ENST00000640218 AQRO60306 1485 aaKnown RBP eCLIP17.74■□□□□ 0.431e-7■■■■□ 22.9
HNRNPU-226ENST00000640218 NAP1L1P55209 391 aaKnown RBP17.74■□□□□ 0.43
HNRNPU-226ENST00000640218 ESCO1Q5FWF5 840 aa17.74■□□□□ 0.43
HNRNPU-226ENST00000640218 AAMPQ13685 434 aa17.73■□□□□ 0.43
HNRNPU-226ENST00000640218 CLASRPQ8N2M8 674 aaKnown RBP17.73■□□□□ 0.43
HNRNPU-226ENST00000640218 AFAP1Q8N556 730 aa17.73■□□□□ 0.43
HNRNPU-226ENST00000640218 PSMA5P28066 241 aa17.73■□□□□ 0.43
HNRNPU-226ENST00000640218 DNAJC2Q99543 621 aaKnown RBP17.73■□□□□ 0.43
HNRNPU-226ENST00000640218 BRMS1Q9HCU9 246 aa17.73■□□□□ 0.43
HNRNPU-226ENST00000640218 BRD4O60885 1362 aaPredicted RBP17.72■□□□□ 0.43
HNRNPU-226ENST00000640218 CDCA7LQ96GN5 454 aa17.72■□□□□ 0.43
HNRNPU-226ENST00000640218 GPRASP1Q5JY77 1395 aa17.72■□□□□ 0.43
HNRNPU-226ENST00000640218 PATL2C9JE40 543 aaKnown RBP17.72■□□□□ 0.43
HNRNPU-226ENST00000640218 PRKAR2BP31323 418 aa17.72■□□□□ 0.43
HNRNPU-226ENST00000640218 GAS2L2Q8NHY3 880 aa17.72■□□□□ 0.43
HNRNPU-226ENST00000640218 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.72■□□□□ 0.43
HNRNPU-226ENST00000640218 NCOA2Q15596 1464 aa17.72■□□□□ 0.43
HNRNPU-226ENST00000640218 WASHC2AQ641Q2 1341 aa17.72■□□□□ 0.43
HNRNPU-226ENST00000640218 RRBP1Q9P2E9 1410 aaKnown RBP17.72■□□□□ 0.43
HNRNPU-226ENST00000640218 GNAI3P08754 354 aa17.71■□□□□ 0.43
HNRNPU-226ENST00000640218 IFT57Q9NWB7 429 aa17.71■□□□□ 0.43
HNRNPU-226ENST00000640218 FYCO1Q9BQS8 1478 aa17.71■□□□□ 0.42
HNRNPU-226ENST00000640218 ZNF771Q7L3S4 317 aaPredicted RBP17.7■□□□□ 0.42
HNRNPU-226ENST00000640218 XBP1P17861 261 aa17.7■□□□□ 0.42
HNRNPU-226ENST00000640218 PPP2R1AP30153 589 aa17.7■□□□□ 0.42
HNRNPU-226ENST00000640218 EXOSC9Q06265 439 aaKnown RBP17.7■□□□□ 0.42
HNRNPU-226ENST00000640218 RBM42Q9BTD8 480 aaKnown RBP17.7■□□□□ 0.42
HNRNPU-226ENST00000640218 C1orf115Q9H7X2 142 aa17.7■□□□□ 0.42
HNRNPU-226ENST00000640218 OLFM4Q6UX06 510 aa17.7■□□□□ 0.42
HNRNPU-226ENST00000640218 KIF6Q6ZMV9 814 aa17.7■□□□□ 0.42
HNRNPU-226ENST00000640218 PRAM1Q96QH2 718 aa17.7■□□□□ 0.42
HNRNPU-226ENST00000640218 PLEKHO1Q53GL0 409 aaPredicted RBP17.7■□□□□ 0.42
HNRNPU-226ENST00000640218 TXNDC2Q86VQ3 553 aa17.7■□□□□ 0.42
HNRNPU-226ENST00000640218 PROSER2Q86WR7 435 aaPredicted RBP17.7■□□□□ 0.42
HNRNPU-226ENST00000640218 TBC1D2BQ9UPU7 963 aa17.7■□□□□ 0.42
HNRNPU-226ENST00000640218 KIF21BO75037 1637 aa17.7■□□□□ 0.42
HNRNPU-226ENST00000640218 GRM1Q13255 1194 aa17.69■□□□□ 0.42
HNRNPU-226ENST00000640218 IBSPP21815 317 aaPredicted RBP17.69■□□□□ 0.42
HNRNPU-226ENST00000640218 IKQ13123 557 aaPredicted RBP17.69■□□□□ 0.42
HNRNPU-226ENST00000640218 SDF4Q9BRK5 362 aa17.69■□□□□ 0.42
HNRNPU-226ENST00000640218 BCL11BQ9C0K0 894 aaPredicted RBP17.68■□□□□ 0.42
HNRNPU-226ENST00000640218 FAM13BQ9NYF5 915 aa17.68■□□□□ 0.42
HNRNPU-226ENST00000640218 TWISTNBQ3B726 338 aaPredicted RBP17.68■□□□□ 0.42
HNRNPU-226ENST00000640218 CT47A1Q5JQC4 288 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms