RNA–Protein interactions for RNA: ENST00000640056.1

HNRNPU-224, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-224ENST00000640056 SLC26A8Q96RN1 970 aa13.34□□□□□ -0.27
HNRNPU-224ENST00000640056 NWD1Q149M9 1564 aa13.33□□□□□ -0.27
HNRNPU-224ENST00000640056 CHGAP10645 457 aaKnown RBP13.33□□□□□ -0.28
HNRNPU-224ENST00000640056 RALBP1Q15311 655 aa13.33□□□□□ -0.28
HNRNPU-224ENST00000640056 ZRANB1Q9UGI0 708 aa13.33□□□□□ -0.28
HNRNPU-224ENST00000640056 BRD4O60885 1362 aaPredicted RBP13.33□□□□□ -0.28
HNRNPU-224ENST00000640056 STRCP1A6NGW2 1772 aa13.32□□□□□ -0.28
HNRNPU-224ENST00000640056 NCOA3Q9Y6Q9 1424 aa13.32□□□□□ -0.28
HNRNPU-224ENST00000640056 TCERG1O14776 1098 aaKnown RBP13.32□□□□□ -0.28
HNRNPU-224ENST00000640056 DIP2AQ14689 1571 aa13.32□□□□□ -0.28
HNRNPU-224ENST00000640056 TMEM94Q12767 1356 aa13.32□□□□□ -0.28
HNRNPU-224ENST00000640056 RRP1P56182 461 aaKnown RBP13.32□□□□□ -0.28
HNRNPU-224ENST00000640056 ALKQ9UM73 1620 aa13.31□□□□□ -0.28
HNRNPU-224ENST00000640056 MYBBP1AQ9BQG0 1328 aaKnown RBP13.31□□□□□ -0.28
HNRNPU-224ENST00000640056 PROSER2Q86WR7 435 aaPredicted RBP13.31□□□□□ -0.28
HNRNPU-224ENST00000640056 RALGAPBQ86X10 1494 aa13.31□□□□□ -0.28
HNRNPU-224ENST00000640056 CARD11Q9BXL7 1154 aa13.3□□□□□ -0.28
HNRNPU-224ENST00000640056 SENP3Q9H4L4 574 aaPredicted RBP13.3□□□□□ -0.28
HNRNPU-224ENST00000640056 FAM135BQ49AJ0 1406 aa13.3□□□□□ -0.28
HNRNPU-224ENST00000640056 TRPM2O94759 1503 aa13.29□□□□□ -0.28
HNRNPU-224ENST00000640056 PDE3BQ13370 1112 aa13.29□□□□□ -0.28
HNRNPU-224ENST00000640056 ADAMTS13Q76LX8 1427 aa13.28□□□□□ -0.28
HNRNPU-224ENST00000640056 SENP3-EIF4A1A0A087X0R7 540 aa13.28□□□□□ -0.28
HNRNPU-224ENST00000640056 RCAN3Q9UKA8 241 aa13.28□□□□□ -0.28
HNRNPU-224ENST00000640056 MSH6P52701 1360 aa13.28□□□□□ -0.28
HNRNPU-224ENST00000640056 MS4A1P11836 297 aa13.27□□□□□ -0.28
HNRNPU-224ENST00000640056 EXOC6Q8TAG9 804 aa13.27□□□□□ -0.28
HNRNPU-224ENST00000640056 ST20-MTHFSA0A0A6YYL1 179 aa13.27□□□□□ -0.29
HNRNPU-224ENST00000640056 SPHKAPQ2M3C7 1700 aa13.26□□□□□ -0.29
HNRNPU-224ENST00000640056 PDE4AP27815 886 aa13.26□□□□□ -0.29
HNRNPU-224ENST00000640056 USP35Q9P2H5 1018 aa13.25□□□□□ -0.29
HNRNPU-224ENST00000640056 BACH2Q9BYV9 841 aa13.25□□□□□ -0.29
HNRNPU-224ENST00000640056 RPGRIP1LQ68CZ1 1315 aa13.24□□□□□ -0.29
HNRNPU-224ENST00000640056 SETBP1Q9Y6X0 1596 aa13.24□□□□□ -0.29
HNRNPU-224ENST00000640056 NLRP13Q86W25 1043 aa13.23□□□□□ -0.29
HNRNPU-224ENST00000640056 NPM2Q86SE8 214 aaKnown RBP13.22□□□□□ -0.29
HNRNPU-224ENST00000640056 VGFO15240 615 aaPredicted RBP13.22□□□□□ -0.29
HNRNPU-224ENST00000640056 NUTM2DQ5VT03 806 aaPredicted RBP13.22□□□□□ -0.29
HNRNPU-224ENST00000640056 CLTCL1P53675 1640 aa13.21□□□□□ -0.29
HNRNPU-224ENST00000640056 CADPS2Q86UW7 1296 aa13.21□□□□□ -0.29
HNRNPU-224ENST00000640056 C19orf44Q9H6X5 657 aa13.21□□□□□ -0.29
HNRNPU-224ENST00000640056 AMOTL2Q9Y2J4 779 aa13.21□□□□□ -0.29
HNRNPU-224ENST00000640056 KDM2AQ9Y2K7 1162 aa13.21□□□□□ -0.29
HNRNPU-224ENST00000640056 CHD2O14647 1828 aaKnown RBP13.21□□□□□ -0.29
HNRNPU-224ENST00000640056 XIRP1Q702N8 1843 aaKnown RBP13.21□□□□□ -0.29
HNRNPU-224ENST00000640056 MYO5BQ9ULV0 1848 aa13.21□□□□□ -0.29
HNRNPU-224ENST00000640056 PARD3Q8TEW0 1356 aa13.21□□□□□ -0.3
HNRNPU-224ENST00000640056 DCAF11Q8TEB1 546 aa13.2□□□□□ -0.3
HNRNPU-224ENST00000640056 SLAIN2Q9P270 581 aa13.2□□□□□ -0.3
HNRNPU-224ENST00000640056 DCCP43146 1447 aa13.2□□□□□ -0.3
HNRNPU-224ENST00000640056 NEXMIFQ5QGS0 1516 aa13.2□□□□□ -0.3
HNRNPU-224ENST00000640056 PPM1GO15355 546 aaPredicted RBP13.2□□□□□ -0.3
HNRNPU-224ENST00000640056 INSRP06213 1382 aa13.19□□□□□ -0.3
HNRNPU-224ENST00000640056 NEFMP07197 916 aa13.18□□□□□ -0.3
HNRNPU-224ENST00000640056 C14orf37Q86TY3 774 aa13.18□□□□□ -0.3
HNRNPU-224ENST00000640056 PER1O15534 1290 aaPredicted RBP13.18□□□□□ -0.3
HNRNPU-224ENST00000640056 ATF3P18847 181 aa13.18□□□□□ -0.3
HNRNPU-224ENST00000640056 SALL2Q9Y467 1007 aaPredicted RBP13.18□□□□□ -0.3
HNRNPU-224ENST00000640056 PTPRUQ92729 1446 aa13.18□□□□□ -0.3
HNRNPU-224ENST00000640056 CCDC144AA2RUR9 1427 aa13.17□□□□□ -0.3
HNRNPU-224ENST00000640056 NRXN3Q9Y4C0 1643 aa13.17□□□□□ -0.3
HNRNPU-224ENST00000640056 PRAG1Q86YV5 1406 aa13.16□□□□□ -0.3
HNRNPU-224ENST00000640056 ZNF772Q68DY9 489 aaPredicted RBP13.16□□□□□ -0.3
HNRNPU-224ENST00000640056 CDCA7LQ96GN5 454 aa13.16□□□□□ -0.3
HNRNPU-224ENST00000640056 METP08581 1390 aa13.15□□□□□ -0.3
HNRNPU-224ENST00000640056 YY1P25490 414 aa13.15□□□□□ -0.3
HNRNPU-224ENST00000640056 DDRGK1Q96HY6 314 aa13.15□□□□□ -0.3
HNRNPU-224ENST00000640056 LAS1LQ9Y4W2 734 aaKnown RBP13.15□□□□□ -0.3
HNRNPU-224ENST00000640056 CDK12Q9NYV4 1490 aaPredicted RBP13.15□□□□□ -0.3
HNRNPU-224ENST00000640056 XRN1Q8IZH2 1706 aaKnown RBP13.15□□□□□ -0.3
HNRNPU-224ENST00000640056 ROBO1Q9Y6N7 1651 aa13.15□□□□□ -0.3
HNRNPU-224ENST00000640056 KIF1BO60333 1816 aa13.14□□□□□ -0.31
HNRNPU-224ENST00000640056 PTCH1Q13635 1447 aa13.14□□□□□ -0.31
HNRNPU-224ENST00000640056 RXRBP28702 533 aa13.13□□□□□ -0.31
HNRNPU-224ENST00000640056 BLMP54132 1417 aaPredicted RBP13.12□□□□□ -0.31
HNRNPU-224ENST00000640056 ADGRL3Q9HAR2 1447 aa13.12□□□□□ -0.31
HNRNPU-224ENST00000640056 JCADQ9P266 1359 aa13.12□□□□□ -0.31
HNRNPU-224ENST00000640056 PLIN1O60240 522 aa13.12□□□□□ -0.31
HNRNPU-224ENST00000640056 CRBNQ96SW2 442 aa13.12□□□□□ -0.31
HNRNPU-224ENST00000640056 IL27Q8NEV9 243 aa13.11□□□□□ -0.31
HNRNPU-224ENST00000640056 GPRASP1Q5JY77 1395 aa13.1□□□□□ -0.31
HNRNPU-224ENST00000640056 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.1□□□□□ -0.31
HNRNPU-224ENST00000640056 AHDC1Q5TGY3 1603 aaPredicted RBP13.09□□□□□ -0.31
HNRNPU-224ENST00000640056 NBPF1Q3BBV0 1214 aa13.08□□□□□ -0.31
HNRNPU-224ENST00000640056 TRPM1Q7Z4N2 1603 aa13.08□□□□□ -0.32
HNRNPU-224ENST00000640056 MST1RQ04912 1400 aa13.08□□□□□ -0.32
HNRNPU-224ENST00000640056 SPATA31A6Q5VVP1 1343 aa13.08□□□□□ -0.32
HNRNPU-224ENST00000640056 CC2D1BQ5T0F9 858 aaKnown RBP13.08□□□□□ -0.32
HNRNPU-224ENST00000640056 BRINP3Q76B58 766 aa13.08□□□□□ -0.32
HNRNPU-224ENST00000640056 TESK2Q96S53 571 aa13.08□□□□□ -0.32
HNRNPU-224ENST00000640056 KDM2BQ8NHM5 1336 aa13.07□□□□□ -0.32
HNRNPU-224ENST00000640056 PANK3Q9H999 370 aa13.07□□□□□ -0.32
HNRNPU-224ENST00000640056 SLC34A2O95436 690 aa13.06□□□□□ -0.32
HNRNPU-224ENST00000640056 ANO8Q9HCE9 1232 aaPredicted RBP13.06□□□□□ -0.32
HNRNPU-224ENST00000640056 CENPQQ7L2Z9 268 aaPredicted RBP13.06□□□□□ -0.32
HNRNPU-224ENST00000640056 PPLO60437 1756 aa13.06□□□□□ -0.32
HNRNPU-224ENST00000640056 COL16A1Q07092 1604 aaPredicted RBP13.06□□□□□ -0.32
HNRNPU-224ENST00000640056 TECPR2O15040 1411 aa13.05□□□□□ -0.32
HNRNPU-224ENST00000640056 GSE1Q14687 1217 aa13.05□□□□□ -0.32
HNRNPU-224ENST00000640056 PCDH10Q9P2E7 1040 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms