RNA–Protein interactions for RNA: ENST00000639548.1

PAX6-258, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-258ENST00000639548 TRAK1Q9UPV9 953 aa16.42■□□□□ 0.22
PAX6-258ENST00000639548 MED14O60244 1454 aa16.41■□□□□ 0.22
PAX6-258ENST00000639548 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.41■□□□□ 0.22
PAX6-258ENST00000639548 KNDC1Q76NI1 1749 aa16.41■□□□□ 0.22
PAX6-258ENST00000639548 NRXN3Q9Y4C0 1643 aa16.41■□□□□ 0.22
PAX6-258ENST00000639548 SUPT16HQ9Y5B9 1047 aaKnown RBP16.4■□□□□ 0.22
PAX6-258ENST00000639548 EVC2Q86UK5 1308 aa16.39■□□□□ 0.21
PAX6-258ENST00000639548 TMEM132EQ6IEE7 984 aa16.39■□□□□ 0.21
PAX6-258ENST00000639548 STAG3Q9UJ98 1225 aa16.39■□□□□ 0.21
PAX6-258ENST00000639548 CPS1P31327 1500 aa16.38■□□□□ 0.21
PAX6-258ENST00000639548 HDGFP51858 240 aaKnown RBP16.37■□□□□ 0.21
PAX6-258ENST00000639548 CC2D1BQ5T0F9 858 aaKnown RBP16.37■□□□□ 0.21
PAX6-258ENST00000639548 NPHP4O75161 1426 aaPredicted RBP16.37■□□□□ 0.21
PAX6-258ENST00000639548 BLMP54132 1417 aaPredicted RBP16.37■□□□□ 0.21
PAX6-258ENST00000639548 UBAP1LF5GYI3 381 aa16.36■□□□□ 0.21
PAX6-258ENST00000639548 SMG6Q86US8 1419 aaKnown RBP16.36■□□□□ 0.21
PAX6-258ENST00000639548 NEFLP07196 543 aa16.35■□□□□ 0.21
PAX6-258ENST00000639548 ANKRD36BQ8N2N9 1353 aa16.34■□□□□ 0.21
PAX6-258ENST00000639548 ABCC11Q96J66 1382 aa16.34■□□□□ 0.21
PAX6-258ENST00000639548 PPP2R1AP30153 589 aa16.34■□□□□ 0.21
PAX6-258ENST00000639548 NUTM2DQ5VT03 806 aaPredicted RBP16.34■□□□□ 0.21
PAX6-258ENST00000639548 NSD2O96028 1365 aa16.34■□□□□ 0.21
PAX6-258ENST00000639548 ATAD2Q6PL18 1390 aa16.34■□□□□ 0.21
PAX6-258ENST00000639548 TECPR2O15040 1411 aa16.33■□□□□ 0.2
PAX6-258ENST00000639548 ERICH6BQ5W0A0 696 aa16.33■□□□□ 0.2
PAX6-258ENST00000639548 SIRT1Q96EB6 747 aa16.33■□□□□ 0.2
PAX6-258ENST00000639548 CARD14Q9BXL6 1004 aa16.32■□□□□ 0.2
PAX6-258ENST00000639548 TMEM2Q9UHN6 1383 aa16.32■□□□□ 0.2
PAX6-258ENST00000639548 SLIT1O75093 1534 aa16.32■□□□□ 0.2
PAX6-258ENST00000639548 ARHGAP23Q9P227 1491 aa16.31■□□□□ 0.2
PAX6-258ENST00000639548 FAM135BQ49AJ0 1406 aa16.31■□□□□ 0.2
PAX6-258ENST00000639548 PDE3BQ13370 1112 aa16.3■□□□□ 0.2
PAX6-258ENST00000639548 CNGB1Q14028 1251 aaPredicted RBP16.3■□□□□ 0.2
PAX6-258ENST00000639548 ANKRD26Q9UPS8 1709 aa16.3■□□□□ 0.2
PAX6-258ENST00000639548 NSD3Q9BZ95 1437 aa16.3■□□□□ 0.2
PAX6-258ENST00000639548 LTKP29376 864 aa16.28■□□□□ 0.2
PAX6-258ENST00000639548 TOM1O60784 492 aa16.28■□□□□ 0.2
PAX6-258ENST00000639548 NUDCQ9Y266 331 aa16.28■□□□□ 0.2
PAX6-258ENST00000639548 POLR3AO14802 1390 aaPredicted RBP16.27■□□□□ 0.2
PAX6-258ENST00000639548 PLEKHG1Q9ULL1 1385 aa16.27■□□□□ 0.2
PAX6-258ENST00000639548 STRCP1A6NGW2 1772 aa16.27■□□□□ 0.19
PAX6-258ENST00000639548 CGNL1Q0VF96 1302 aa16.26■□□□□ 0.19
PAX6-258ENST00000639548 FKBP8Q14318 412 aa16.26■□□□□ 0.19
PAX6-258ENST00000639548 PRAM1Q96QH2 718 aa16.26■□□□□ 0.19
PAX6-258ENST00000639548 DIP2AQ14689 1571 aa16.25■□□□□ 0.19
PAX6-258ENST00000639548 TXNDC2Q86VQ3 553 aa16.25■□□□□ 0.19
PAX6-258ENST00000639548 SLC12A5Q9H2X9 1139 aa16.25■□□□□ 0.19
PAX6-258ENST00000639548 POGKQ9P215 609 aa16.25■□□□□ 0.19
PAX6-258ENST00000639548 ADGRB2O60241 1585 aa16.25■□□□□ 0.19
PAX6-258ENST00000639548 ADAMTS13Q76LX8 1427 aa16.24■□□□□ 0.19
PAX6-258ENST00000639548 ATP7BP35670 1465 aa16.24■□□□□ 0.19
PAX6-258ENST00000639548 LRRC7Q96NW7 1537 aa16.24■□□□□ 0.19
PAX6-258ENST00000639548 ILDR2Q71H61 639 aa16.24■□□□□ 0.19
PAX6-258ENST00000639548 EID1Q9Y6B2 187 aa16.24■□□□□ 0.19
PAX6-258ENST00000639548 RNF123Q5XPI4 1314 aa16.24■□□□□ 0.19
PAX6-258ENST00000639548 CD163L1Q9NR16 1453 aa16.23■□□□□ 0.19
PAX6-258ENST00000639548 PELP1Q8IZL8 1130 aaKnown RBP16.23■□□□□ 0.19
PAX6-258ENST00000639548 STK26Q9P289 416 aa16.23■□□□□ 0.19
PAX6-258ENST00000639548 PIP4K2BP78356 416 aa16.22■□□□□ 0.19
PAX6-258ENST00000639548 NGEFQ8N5V2 710 aa16.22■□□□□ 0.19
PAX6-258ENST00000639548 METP08581 1390 aa16.22■□□□□ 0.19
PAX6-258ENST00000639548 SHPRHQ149N8 1683 aa16.22■□□□□ 0.19
PAX6-258ENST00000639548 KIF20BQ96Q89 1820 aa16.21■□□□□ 0.19
PAX6-258ENST00000639548 A0A1W2PP64 1363 aa16.21■□□□□ 0.19
PAX6-258ENST00000639548 HSPA1LP34931 641 aa16.2■□□□□ 0.18
PAX6-258ENST00000639548 WDR43Q15061 677 aaKnown RBP eCLIP16.2■□□□□ 0.18
PAX6-258ENST00000639548 CABP2Q9NPB3 220 aa16.2■□□□□ 0.18
PAX6-258ENST00000639548 TERF2IPQ9NYB0 399 aa16.2■□□□□ 0.18
PAX6-258ENST00000639548 SRPK2P78362 688 aaKnown RBP16.19■□□□□ 0.18
PAX6-258ENST00000639548 MINK1Q8N4C8 1332 aaPredicted RBP16.19■□□□□ 0.18
PAX6-258ENST00000639548 ADAMTS8Q9UP79 889 aa16.19■□□□□ 0.18
PAX6-258ENST00000639548 MORC1Q86VD1 984 aa16.18■□□□□ 0.18
PAX6-258ENST00000639548 CDK19Q9BWU1 502 aa16.18■□□□□ 0.18
PAX6-258ENST00000639548 PLEKHH1Q9ULM0 1364 aa16.16■□□□□ 0.18
PAX6-258ENST00000639548 SAFB2Q14151 953 aaKnown RBP eCLIP16.16■□□□□ 0.18
PAX6-258ENST00000639548 AKAP12Q02952 1782 aa16.16■□□□□ 0.18
PAX6-258ENST00000639548 MON2Q7Z3U7 1717 aa16.16■□□□□ 0.18
PAX6-258ENST00000639548 CDC42BPGQ6DT37 1551 aa16.15■□□□□ 0.18
PAX6-258ENST00000639548 HDGFL2Q7Z4V5 671 aaPredicted RBP16.15■□□□□ 0.18
PAX6-258ENST00000639548 TOPAZ1Q8N9V7 1692 aa16.15■□□□□ 0.18
PAX6-258ENST00000639548 CPSF1Q10570 1443 aaKnown RBP16.15■□□□□ 0.18
PAX6-258ENST00000639548 PTCH1Q13635 1447 aa16.15■□□□□ 0.18
PAX6-258ENST00000639548 WASLO00401 505 aaPredicted RBP16.14■□□□□ 0.17
PAX6-258ENST00000639548 SOCS7O14512 581 aa16.14■□□□□ 0.17
PAX6-258ENST00000639548 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
PAX6-258ENST00000639548 XIRP1Q702N8 1843 aaKnown RBP16.14■□□□□ 0.17
PAX6-258ENST00000639548 XRN1Q8IZH2 1706 aaKnown RBP16.14■□□□□ 0.17
PAX6-258ENST00000639548 ZNF521Q96K83 1311 aa16.13■□□□□ 0.17
PAX6-258ENST00000639548 TBX22Q9Y458 520 aa16.13■□□□□ 0.17
PAX6-258ENST00000639548 ITSN1Q15811 1721 aa16.13■□□□□ 0.17
PAX6-258ENST00000639548 PIK3R4Q99570 1358 aa16.13■□□□□ 0.17
PAX6-258ENST00000639548 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.12■□□□□ 0.17
PAX6-258ENST00000639548 EDC4Q6P2E9 1401 aaKnown RBP16.12■□□□□ 0.17
PAX6-258ENST00000639548 KCNA6P17658 529 aa16.11■□□□□ 0.17
PAX6-258ENST00000639548 WAPLQ7Z5K2 1190 aa16.11■□□□□ 0.17
PAX6-258ENST00000639548 CFAP53Q96M91 514 aa16.11■□□□□ 0.17
PAX6-258ENST00000639548 SLC26A8Q96RN1 970 aa16.11■□□□□ 0.17
PAX6-258ENST00000639548 MED1Q15648 1581 aaPredicted RBP16.1■□□□□ 0.17
PAX6-258ENST00000639548 ROBO2Q9HCK4 1378 aa16.1■□□□□ 0.17
PAX6-258ENST00000639548 PPIP5K1Q6PFW1 1433 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms