RNA–Protein interactions for RNA: ENST00000638786.1

ATM-227, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 1,140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-227ENST00000638786 BAZ1BQ9UIG0 1483 aaKnown RBP11.83□□□□□ -0.52
ATM-227ENST00000638786 WIZO95785 1651 aa11.82□□□□□ -0.52
ATM-227ENST00000638786 ZPR1O75312 459 aa11.82□□□□□ -0.52
ATM-227ENST00000638786 ITGBL1O95965 494 aaPredicted RBP11.82□□□□□ -0.52
ATM-227ENST00000638786 GUCA2AQ02747 115 aa11.82□□□□□ -0.52
ATM-227ENST00000638786 FDX1P10109 184 aa11.81□□□□□ -0.52
ATM-227ENST00000638786 MYSM1Q5VVJ2 828 aa11.81□□□□□ -0.52
ATM-227ENST00000638786 RIC3Q7Z5B4 369 aa11.8□□□□□ -0.52
ATM-227ENST00000638786 POLR3EQ9NVU0 708 aa11.8□□□□□ -0.52
ATM-227ENST00000638786 ATP1B4Q9UN42 357 aaPredicted RBP11.8□□□□□ -0.52
ATM-227ENST00000638786 HMGXB3Q12766 1538 aa11.8□□□□□ -0.52
ATM-227ENST00000638786 PEG3Q9GZU2 1588 aa11.79□□□□□ -0.52
ATM-227ENST00000638786 RSBN1LQ6PCB5 846 aaPredicted RBP11.78□□□□□ -0.52
ATM-227ENST00000638786 Q3C1V9 767 aa11.77□□□□□ -0.53
ATM-227ENST00000638786 NKX2-3Q8TAU0 364 aa11.77□□□□□ -0.53
ATM-227ENST00000638786 RSF1Q96T23 1441 aaPredicted RBP11.77□□□□□ -0.53
ATM-227ENST00000638786 SPTLC1O15269 473 aa11.76□□□□□ -0.53
ATM-227ENST00000638786 TLL1O43897 1013 aa11.76□□□□□ -0.53
ATM-227ENST00000638786 FMNL1O95466 1100 aaPredicted RBP11.76□□□□□ -0.53
ATM-227ENST00000638786 PCDHGC3Q9UN70 934 aa11.76□□□□□ -0.53
ATM-227ENST00000638786 CLK2P49760 499 aaKnown RBP11.75□□□□□ -0.53
ATM-227ENST00000638786 SKIV2LQ15477 1246 aaKnown RBP11.75□□□□□ -0.53
ATM-227ENST00000638786 CSPP1Q1MSJ5 1256 aa11.75□□□□□ -0.53
ATM-227ENST00000638786 SH3D19Q5HYK7 790 aa11.75□□□□□ -0.53
ATM-227ENST00000638786 RNF19BQ6ZMZ0 732 aa11.75□□□□□ -0.53
ATM-227ENST00000638786 SPSB2Q99619 263 aa11.75□□□□□ -0.53
ATM-227ENST00000638786 LIMD1Q9UGP4 676 aa11.75□□□□□ -0.53
ATM-227ENST00000638786 GJA5P36382 358 aa11.74□□□□□ -0.53
ATM-227ENST00000638786 BRICD5Q6PL45 260 aa11.74□□□□□ -0.53
ATM-227ENST00000638786 SYMPKQ92797 1274 aaKnown RBP11.74□□□□□ -0.53
ATM-227ENST00000638786 SALL2Q9Y467 1007 aaPredicted RBP11.74□□□□□ -0.53
ATM-227ENST00000638786 PCDHB15Q9Y5E8 787 aa11.74□□□□□ -0.53
ATM-227ENST00000638786 C6orf229H3BNL8 230 aa11.73□□□□□ -0.53
ATM-227ENST00000638786 THAP11Q96EK4 314 aa11.73□□□□□ -0.53
ATM-227ENST00000638786 NESP48681 1621 aa11.71□□□□□ -0.53
ATM-227ENST00000638786 ADH1BP00325 375 aa11.71□□□□□ -0.53
ATM-227ENST00000638786 IFFO2Q5TF58 517 aa11.71□□□□□ -0.53
ATM-227ENST00000638786 PROCA1Q8NCQ7 364 aaPredicted RBP11.71□□□□□ -0.53
ATM-227ENST00000638786 PCMTD1Q96MG8 357 aaPredicted RBP11.7□□□□□ -0.54
ATM-227ENST00000638786 USB1Q9BQ65 265 aaKnown RBP11.7□□□□□ -0.54
ATM-227ENST00000638786 NUTM2BA6NNL0 878 aaPredicted RBP11.69□□□□□ -0.54
ATM-227ENST00000638786 NUTM2EB1AL46 878 aaPredicted RBP11.69□□□□□ -0.54
ATM-227ENST00000638786 MTMR2Q13614 643 aa11.69□□□□□ -0.54
ATM-227ENST00000638786 NUTM2DQ5VT03 806 aaPredicted RBP11.69□□□□□ -0.54
ATM-227ENST00000638786 NUTM2AQ8IVF1 878 aaPredicted RBP11.69□□□□□ -0.54
ATM-227ENST00000638786 GOPCQ9HD26 462 aa11.69□□□□□ -0.54
ATM-227ENST00000638786 TUSC1Q2TAM9 212 aa11.68□□□□□ -0.54
ATM-227ENST00000638786 CABLES1Q8TDN4 633 aa11.68□□□□□ -0.54
ATM-227ENST00000638786 SLC6A16Q9GZN6 736 aa11.68□□□□□ -0.54
ATM-227ENST00000638786 ZBTB3Q9H5J0 574 aa11.68□□□□□ -0.54
ATM-227ENST00000638786 HRCP23327 699 aa11.67□□□□□ -0.54
ATM-227ENST00000638786 FAM160A2Q8N612 972 aaPredicted RBP11.67□□□□□ -0.54
ATM-227ENST00000638786 QPCTQ16769 361 aa11.66□□□□□ -0.54
ATM-227ENST00000638786 PRPF38BQ5VTL8 546 aaKnown RBP11.66□□□□□ -0.54
ATM-227ENST00000638786 RETREG3Q86VR2 466 aa11.66□□□□□ -0.54
ATM-227ENST00000638786 SPDYE5A6NIY4 337 aa11.65□□□□□ -0.54
ATM-227ENST00000638786 S1PR4O95977 384 aa11.65□□□□□ -0.54
ATM-227ENST00000638786 GGCXP38435 758 aa11.65□□□□□ -0.54
ATM-227ENST00000638786 PPP1R18Q6NYC8 613 aa11.65□□□□□ -0.54
ATM-227ENST00000638786 LILRB3O75022 631 aa11.64□□□□□ -0.55
ATM-227ENST00000638786 MSS51Q4VC12 460 aa11.63□□□□□ -0.55
ATM-227ENST00000638786 PRR7Q8TB68 274 aa11.63□□□□□ -0.55
ATM-227ENST00000638786 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.63□□□□□ -0.55
ATM-227ENST00000638786 ERCC6Q03468 1493 aa11.63□□□□□ -0.55
ATM-227ENST00000638786 TOP2AP11388 1531 aaKnown RBP11.62□□□□□ -0.55
ATM-227ENST00000638786 RTL5Q5HYW3 569 aaPredicted RBP11.62□□□□□ -0.55
ATM-227ENST00000638786 PRDM9Q9NQV7 894 aa11.62□□□□□ -0.55
ATM-227ENST00000638786 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.62□□□□□ -0.55
ATM-227ENST00000638786 A0A0G2JS52 829 aa11.61□□□□□ -0.55
ATM-227ENST00000638786 IRX2Q9BZI1 471 aaPredicted RBP11.61□□□□□ -0.55
ATM-227ENST00000638786 PPEF1O14829 653 aaPredicted RBP11.6□□□□□ -0.55
ATM-227ENST00000638786 TMEM132AQ24JP5 1023 aa11.6□□□□□ -0.55
ATM-227ENST00000638786 TSC1Q92574 1164 aa11.6□□□□□ -0.55
ATM-227ENST00000638786 CFAP99D6REC4 459 aa11.59□□□□□ -0.55
ATM-227ENST00000638786 RNF223E7ERA6 249 aa11.58□□□□□ -0.56
ATM-227ENST00000638786 JUNDP17535 347 aa11.57□□□□□ -0.56
ATM-227ENST00000638786 MMP16P51512 607 aa11.57□□□□□ -0.56
ATM-227ENST00000638786 FBXO31Q5XUX0 539 aaPredicted RBP11.57□□□□□ -0.56
ATM-227ENST00000638786 SUPT5HO00267 1087 aaKnown RBP11.56□□□□□ -0.56
ATM-227ENST00000638786 DXOO77932 396 aaKnown RBP11.56□□□□□ -0.56
ATM-227ENST00000638786 PPP2R2DQ66LE6 453 aa11.56□□□□□ -0.56
ATM-227ENST00000638786 LAMC3Q9Y6N6 1575 aa11.56□□□□□ -0.56
ATM-227ENST00000638786 KIF21AQ7Z4S6 1674 aa11.55□□□□□ -0.56
ATM-227ENST00000638786 CADPSQ9ULU8 1353 aa11.55□□□□□ -0.56
ATM-227ENST00000638786 RFC5P40937 340 aa11.54□□□□□ -0.56
ATM-227ENST00000638786 DESI1Q6ICB0 168 aa11.54□□□□□ -0.56
ATM-227ENST00000638786 ANKLE1Q8NAG6 615 aa11.54□□□□□ -0.56
ATM-227ENST00000638786 HELBQ8NG08 1087 aaPredicted RBP11.54□□□□□ -0.56
ATM-227ENST00000638786 FCF1Q9Y324 198 aaKnown RBP11.54□□□□□ -0.56
ATM-227ENST00000638786 CCDC88BA6NC98 1476 aa11.53□□□□□ -0.56
ATM-227ENST00000638786 CCDC24Q8N4L8 307 aa11.53□□□□□ -0.56
ATM-227ENST00000638786 AP1G2O75843 785 aa11.51□□□□□ -0.57
ATM-227ENST00000638786 RGS20O76081 388 aa11.51□□□□□ -0.57
ATM-227ENST00000638786 CTDSPL2Q05D32 466 aa11.5□□□□□ -0.57
ATM-227ENST00000638786 LYPD8Q6UX82 237 aa11.5□□□□□ -0.57
ATM-227ENST00000638786 NUDT12Q9BQG2 462 aa11.5□□□□□ -0.57
ATM-227ENST00000638786 PDS5BQ9NTI5 1447 aa11.5□□□□□ -0.57
ATM-227ENST00000638786 PTPRNQ16849 979 aa11.49□□□□□ -0.57
ATM-227ENST00000638786 PER1O15534 1290 aaPredicted RBP11.48□□□□□ -0.57
ATM-227ENST00000638786 TMEM259Q4ZIN3 620 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms