RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 AMER1Q5JTC6 1135 aaPredicted RBP29.48■■■□□ 2.31
SCARB2-212ENST00000638663 WAPLQ7Z5K2 1190 aa29.48■■■□□ 2.31
SCARB2-212ENST00000638663 SLC12A5Q9H2X9 1139 aa29.48■■■□□ 2.31
SCARB2-212ENST00000638663 PLEKHH1Q9ULM0 1364 aa29.46■■■□□ 2.31
SCARB2-212ENST00000638663 CARD14Q9BXL6 1004 aa29.45■■■□□ 2.31
SCARB2-212ENST00000638663 BRD4O60885 1362 aaPredicted RBP29.45■■■□□ 2.3
SCARB2-212ENST00000638663 SRPK2P78362 688 aaKnown RBP29.45■■■□□ 2.3
SCARB2-212ENST00000638663 NLRP13Q86W25 1043 aa29.43■■■□□ 2.3
SCARB2-212ENST00000638663 HNRNPUQ00839 825 aaKnown RBP eCLIP29.42■■■□□ 2.3
SCARB2-212ENST00000638663 SLC26A8Q96RN1 970 aa29.42■■■□□ 2.3
SCARB2-212ENST00000638663 KNDC1Q76NI1 1749 aa29.41■■■□□ 2.3
SCARB2-212ENST00000638663 TECPR2O15040 1411 aa29.41■■■□□ 2.3
SCARB2-212ENST00000638663 MED14O60244 1454 aa29.41■■■□□ 2.3
SCARB2-212ENST00000638663 NPC1L1Q9UHC9 1359 aa29.4■■■□□ 2.3
SCARB2-212ENST00000638663 CDK19Q9BWU1 502 aa29.39■■■□□ 2.3
SCARB2-212ENST00000638663 PNISRQ8TF01 805 aaKnown RBP29.37■■■□□ 2.29
SCARB2-212ENST00000638663 SIRT1Q96EB6 747 aa29.37■■■□□ 2.29
SCARB2-212ENST00000638663 CPS1P31327 1500 aa29.37■■■□□ 2.29
SCARB2-212ENST00000638663 FAM135BQ49AJ0 1406 aa29.37■■■□□ 2.29
SCARB2-212ENST00000638663 ATAD2Q6PL18 1390 aa29.36■■■□□ 2.29
SCARB2-212ENST00000638663 ZNF142P52746 1687 aaPredicted RBP29.36■■■□□ 2.29
SCARB2-212ENST00000638663 NSD3Q9BZ95 1437 aa29.36■■■□□ 2.29
SCARB2-212ENST00000638663 SETD1BQ9UPS6 1966 aaKnown RBP29.35■■■□□ 2.29
SCARB2-212ENST00000638663 TBX22Q9Y458 520 aa29.34■■■□□ 2.29
SCARB2-212ENST00000638663 ANKRD36BQ8N2N9 1353 aa29.33■■■□□ 2.29
SCARB2-212ENST00000638663 ROBO2Q9HCK4 1378 aa29.33■■■□□ 2.29
SCARB2-212ENST00000638663 NINLQ9Y2I6 1382 aa29.33■■■□□ 2.29
SCARB2-212ENST00000638663 SCAF1Q9H7N4 1312 aaKnown RBP29.32■■■□□ 2.28
SCARB2-212ENST00000638663 PTPRUQ92729 1446 aa29.32■■■□□ 2.28
SCARB2-212ENST00000638663 PPP2R1AP30153 589 aa29.3■■■□□ 2.28
SCARB2-212ENST00000638663 DIP2AQ14689 1571 aa29.29■■■□□ 2.28
SCARB2-212ENST00000638663 ANKLE2Q86XL3 938 aa29.28■■■□□ 2.28
SCARB2-212ENST00000638663 GTF3C3Q9Y5Q9 886 aa29.28■■■□□ 2.28
SCARB2-212ENST00000638663 WASLO00401 505 aaPredicted RBP29.27■■■□□ 2.28
SCARB2-212ENST00000638663 AMOTL2Q9Y2J4 779 aa29.27■■■□□ 2.28
SCARB2-212ENST00000638663 A0A1W2PP64 1363 aa29.26■■■□□ 2.27
SCARB2-212ENST00000638663 USP32Q8NFA0 1604 aa29.24■■■□□ 2.27
SCARB2-212ENST00000638663 TERF2IPQ9NYB0 399 aa29.24■■■□□ 2.27
SCARB2-212ENST00000638663 CABP1Q9NZU7 370 aa29.24■■■□□ 2.27
SCARB2-212ENST00000638663 CGNL1Q0VF96 1302 aa29.24■■■□□ 2.27
SCARB2-212ENST00000638663 CD163L1Q9NR16 1453 aa29.22■■■□□ 2.27
SCARB2-212ENST00000638663 MORC1Q86VD1 984 aa29.19■■■□□ 2.26
SCARB2-212ENST00000638663 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.19■■■□□ 2.26
SCARB2-212ENST00000638663 HDGFL2Q7Z4V5 671 aaPredicted RBP29.18■■■□□ 2.26
SCARB2-212ENST00000638663 PTCH1Q13635 1447 aa29.17■■■□□ 2.26
SCARB2-212ENST00000638663 ZBED9Q6R2W3 1325 aa29.17■■■□□ 2.26
SCARB2-212ENST00000638663 NUDT16Q96DE0 195 aaKnown RBP29.16■■■□□ 2.26
SCARB2-212ENST00000638663 PIK3R4Q99570 1358 aa29.15■■■□□ 2.26
SCARB2-212ENST00000638663 ADGRB2O60241 1585 aa29.15■■■□□ 2.26
SCARB2-212ENST00000638663 XRN1Q8IZH2 1706 aaKnown RBP29.14■■■□□ 2.26
SCARB2-212ENST00000638663 NSD2O96028 1365 aa29.14■■■□□ 2.26
SCARB2-212ENST00000638663 PPIP5K1Q6PFW1 1433 aa29.13■■■□□ 2.25
SCARB2-212ENST00000638663 TNNT2P45379 298 aaPredicted RBP29.13■■■□□ 2.25
SCARB2-212ENST00000638663 ATP7BP35670 1465 aa29.12■■■□□ 2.25
SCARB2-212ENST00000638663 KCNA6P17658 529 aa29.12■■■□□ 2.25
SCARB2-212ENST00000638663 NCKAP5LQ9HCH0 1330 aa29.11■■■□□ 2.25
SCARB2-212ENST00000638663 SENP3-EIF4A1A0A087X0R7 540 aa29.1■■■□□ 2.25
SCARB2-212ENST00000638663 CCDC61Q9Y6R9 512 aa29.1■■■□□ 2.25
SCARB2-212ENST00000638663 PRR36Q9H6K5 1346 aa29.09■■■□□ 2.25
SCARB2-212ENST00000638663 NPHP4O75161 1426 aaPredicted RBP29.09■■■□□ 2.25
SCARB2-212ENST00000638663 GGNBP2Q9H3C7 697 aa29.07■■■□□ 2.24
SCARB2-212ENST00000638663 FYB1O15117 783 aa29.06■■■□□ 2.24
SCARB2-212ENST00000638663 NUTM2FA1L443 756 aa29.05■■■□□ 2.24
SCARB2-212ENST00000638663 CPSF1Q10570 1443 aaKnown RBP29.05■■■□□ 2.24
SCARB2-212ENST00000638663 WDR43Q15061 677 aaKnown RBP eCLIP29.05■■■□□ 2.24
SCARB2-212ENST00000638663 ADAMTS8Q9UP79 889 aa29.04■■■□□ 2.24
SCARB2-212ENST00000638663 CDC42BPGQ6DT37 1551 aa29.03■■■□□ 2.24
SCARB2-212ENST00000638663 INSRP06213 1382 aa29.03■■■□□ 2.24
SCARB2-212ENST00000638663 CHD2O14647 1828 aaKnown RBP29.03■■■□□ 2.24
SCARB2-212ENST00000638663 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.02■■■□□ 2.24
SCARB2-212ENST00000638663 BLMP54132 1417 aaPredicted RBP29.02■■■□□ 2.24
SCARB2-212ENST00000638663 POLR3AO14802 1390 aaPredicted RBP29■■■□□ 2.23
SCARB2-212ENST00000638663 ANKRD26Q9UPS8 1709 aa28.99■■■□□ 2.23
SCARB2-212ENST00000638663 KIF20BQ96Q89 1820 aa28.99■■■□□ 2.23
SCARB2-212ENST00000638663 EDC4Q6P2E9 1401 aaKnown RBP28.98■■■□□ 2.23
SCARB2-212ENST00000638663 MTHFSP49914 203 aa28.98■■■□□ 2.23
SCARB2-212ENST00000638663 TOPAZ1Q8N9V7 1692 aa28.97■■■□□ 2.23
SCARB2-212ENST00000638663 KDM4FA0A1W2PPD8 638 aa28.96■■■□□ 2.23
SCARB2-212ENST00000638663 ITSN1Q15811 1721 aa28.96■■■□□ 2.23
SCARB2-212ENST00000638663 AKAP12Q02952 1782 aa28.95■■■□□ 2.22
SCARB2-212ENST00000638663 ZNF692Q9BU19 519 aaPredicted RBP28.94■■■□□ 2.22
SCARB2-212ENST00000638663 SALL2Q9Y467 1007 aaPredicted RBP28.94■■■□□ 2.22
SCARB2-212ENST00000638663 MON2Q7Z3U7 1717 aa28.94■■■□□ 2.22
SCARB2-212ENST00000638663 PLEKHG3A1L390 1219 aa28.94■■■□□ 2.22
SCARB2-212ENST00000638663 NKTRP30414 1462 aaKnown RBP28.92■■■□□ 2.22
SCARB2-212ENST00000638663 ACEP12821 1306 aa28.92■■■□□ 2.22
SCARB2-212ENST00000638663 RBM33Q96EV2 1170 aaKnown RBP28.92■■■□□ 2.22
SCARB2-212ENST00000638663 CFAP53Q96M91 514 aa28.91■■■□□ 2.22
SCARB2-212ENST00000638663 NME9Q86XW9 330 aa28.9■■■□□ 2.22
SCARB2-212ENST00000638663 NALCNQ8IZF0 1738 aa28.87■■■□□ 2.21
SCARB2-212ENST00000638663 HSPA2P54652 639 aa28.87■■■□□ 2.21
SCARB2-212ENST00000638663 PMFBP1Q8TBY8 1022 aa28.87■■■□□ 2.21
SCARB2-212ENST00000638663 SHPRHQ149N8 1683 aa28.87■■■□□ 2.21
SCARB2-212ENST00000638663 RGPD8O14715 1765 aaPredicted RBP28.86■■■□□ 2.21
SCARB2-212ENST00000638663 ZRANB1Q9UGI0 708 aa28.86■■■□□ 2.21
SCARB2-212ENST00000638663 ANKARQ7Z5J8 1434 aa28.85■■■□□ 2.21
SCARB2-212ENST00000638663 CCDC146Q8IYE0 955 aa28.85■■■□□ 2.21
SCARB2-212ENST00000638663 FMN2Q9NZ56 1722 aa28.85■■■□□ 2.21
SCARB2-212ENST00000638663 SMG6Q86US8 1419 aaKnown RBP28.84■■■□□ 2.21
SCARB2-212ENST00000638663 USP6P35125 1406 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms