RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 NPC1L1Q9UHC9 1359 aa8.5□□□□□ -1.05
CACNA1D-227ENST00000637844 CPS1P31327 1500 aa8.5□□□□□ -1.05
CACNA1D-227ENST00000637844 SRPK2P78362 688 aaKnown RBP8.5□□□□□ -1.05
CACNA1D-227ENST00000637844 TXNDC2Q86VQ3 553 aa8.5□□□□□ -1.05
CACNA1D-227ENST00000637844 ARHGAP23Q9P227 1491 aa8.5□□□□□ -1.05
CACNA1D-227ENST00000637844 FAM135BQ49AJ0 1406 aa8.49□□□□□ -1.05
CACNA1D-227ENST00000637844 SAFB2Q14151 953 aaKnown RBP eCLIP8.49□□□□□ -1.05
CACNA1D-227ENST00000637844 SIRT1Q96EB6 747 aa8.49□□□□□ -1.05
CACNA1D-227ENST00000637844 MINK1Q8N4C8 1332 aaPredicted RBP8.49□□□□□ -1.05
CACNA1D-227ENST00000637844 ANKRD36BQ8N2N9 1353 aa8.48□□□□□ -1.05
CACNA1D-227ENST00000637844 TECPR2O15040 1411 aa8.47□□□□□ -1.05
CACNA1D-227ENST00000637844 NSD3Q9BZ95 1437 aa8.47□□□□□ -1.05
CACNA1D-227ENST00000637844 CCDC184Q52MB2 194 aa8.47□□□□□ -1.05
CACNA1D-227ENST00000637844 TERF2IPQ9NYB0 399 aa8.47□□□□□ -1.05
CACNA1D-227ENST00000637844 NSD2O96028 1365 aa8.47□□□□□ -1.05
CACNA1D-227ENST00000637844 AMER1Q5JTC6 1135 aaPredicted RBP8.46□□□□□ -1.06
CACNA1D-227ENST00000637844 HDGFL2Q7Z4V5 671 aaPredicted RBP8.46□□□□□ -1.06
CACNA1D-227ENST00000637844 CABP2Q9NPB3 220 aa8.46□□□□□ -1.06
CACNA1D-227ENST00000637844 GTF3C3Q9Y5Q9 886 aa8.46□□□□□ -1.06
CACNA1D-227ENST00000637844 CGNL1Q0VF96 1302 aa8.46□□□□□ -1.06
CACNA1D-227ENST00000637844 METP08581 1390 aa8.46□□□□□ -1.06
CACNA1D-227ENST00000637844 ADAMTS13Q76LX8 1427 aa8.46□□□□□ -1.06
CACNA1D-227ENST00000637844 LTKP29376 864 aa8.45□□□□□ -1.06
CACNA1D-227ENST00000637844 PNISRQ8TF01 805 aaKnown RBP8.45□□□□□ -1.06
CACNA1D-227ENST00000637844 CDK19Q9BWU1 502 aa8.45□□□□□ -1.06
CACNA1D-227ENST00000637844 SLC12A5Q9H2X9 1139 aa8.45□□□□□ -1.06
CACNA1D-227ENST00000637844 TBX22Q9Y458 520 aa8.45□□□□□ -1.06
CACNA1D-227ENST00000637844 ZBED9Q6R2W3 1325 aa8.45□□□□□ -1.06
CACNA1D-227ENST00000637844 ITSN1Q15811 1721 aa8.45□□□□□ -1.06
CACNA1D-227ENST00000637844 ANKRD26Q9UPS8 1709 aa8.45□□□□□ -1.06
CACNA1D-227ENST00000637844 KIF20BQ96Q89 1820 aa8.45□□□□□ -1.06
CACNA1D-227ENST00000637844 ADGRB2O60241 1585 aa8.44□□□□□ -1.06
CACNA1D-227ENST00000637844 PPP2R1AP30153 589 aa8.44□□□□□ -1.06
CACNA1D-227ENST00000637844 WDR43Q15061 677 aaKnown RBP eCLIP8.44□□□□□ -1.06
CACNA1D-227ENST00000637844 WAPLQ7Z5K2 1190 aa8.44□□□□□ -1.06
CACNA1D-227ENST00000637844 MORC1Q86VD1 984 aa8.44□□□□□ -1.06
CACNA1D-227ENST00000637844 ANKLE2Q86XL3 938 aa8.44□□□□□ -1.06
CACNA1D-227ENST00000637844 SCAF1Q9H7N4 1312 aaKnown RBP8.44□□□□□ -1.06
CACNA1D-227ENST00000637844 INSRP06213 1382 aa8.44□□□□□ -1.06
CACNA1D-227ENST00000637844 PIK3R4Q99570 1358 aa8.44□□□□□ -1.06
CACNA1D-227ENST00000637844 SETD1BQ9UPS6 1966 aaKnown RBP8.44□□□□□ -1.06
CACNA1D-227ENST00000637844 MED14O60244 1454 aa8.44□□□□□ -1.06
CACNA1D-227ENST00000637844 ATP7BP35670 1465 aa8.44□□□□□ -1.06
CACNA1D-227ENST00000637844 WASLO00401 505 aaPredicted RBP8.43□□□□□ -1.06
CACNA1D-227ENST00000637844 NEFLP07196 543 aa8.43□□□□□ -1.06
CACNA1D-227ENST00000637844 SLC26A8Q96RN1 970 aa8.43□□□□□ -1.06
CACNA1D-227ENST00000637844 CARD14Q9BXL6 1004 aa8.43□□□□□ -1.06
CACNA1D-227ENST00000637844 PTCH1Q13635 1447 aa8.43□□□□□ -1.06
CACNA1D-227ENST00000637844 A0A1W2PP64 1363 aa8.42□□□□□ -1.06
CACNA1D-227ENST00000637844 PLEKHH1Q9ULM0 1364 aa8.42□□□□□ -1.06
CACNA1D-227ENST00000637844 XRN1Q8IZH2 1706 aaKnown RBP8.42□□□□□ -1.06
CACNA1D-227ENST00000637844 PPIP5K1Q6PFW1 1433 aa8.41□□□□□ -1.06
CACNA1D-227ENST00000637844 CFAP53Q96M91 514 aa8.41□□□□□ -1.06
CACNA1D-227ENST00000637844 AMOTL2Q9Y2J4 779 aa8.41□□□□□ -1.06
CACNA1D-227ENST00000637844 AKAP12Q02952 1782 aa8.4□□□□□ -1.06
CACNA1D-227ENST00000637844 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.4□□□□□ -1.06
CACNA1D-227ENST00000637844 CDC42BPGQ6DT37 1551 aa8.4□□□□□ -1.06
CACNA1D-227ENST00000637844 BLMP54132 1417 aaPredicted RBP8.4□□□□□ -1.06
CACNA1D-227ENST00000637844 ROBO2Q9HCK4 1378 aa8.4□□□□□ -1.06
CACNA1D-227ENST00000637844 CABP1Q9NZU7 370 aa8.4□□□□□ -1.06
CACNA1D-227ENST00000637844 CHD2O14647 1828 aaKnown RBP8.4□□□□□ -1.07
CACNA1D-227ENST00000637844 MON2Q7Z3U7 1717 aa8.4□□□□□ -1.07
CACNA1D-227ENST00000637844 TOPAZ1Q8N9V7 1692 aa8.4□□□□□ -1.07
CACNA1D-227ENST00000637844 NUDT16Q96DE0 195 aaKnown RBP8.39□□□□□ -1.07
CACNA1D-227ENST00000637844 CCDC61Q9Y6R9 512 aa8.39□□□□□ -1.07
CACNA1D-227ENST00000637844 CD163L1Q9NR16 1453 aa8.38□□□□□ -1.07
CACNA1D-227ENST00000637844 NPHP4O75161 1426 aaPredicted RBP8.38□□□□□ -1.07
CACNA1D-227ENST00000637844 EDC4Q6P2E9 1401 aaKnown RBP8.38□□□□□ -1.07
CACNA1D-227ENST00000637844 PTPRUQ92729 1446 aa8.38□□□□□ -1.07
CACNA1D-227ENST00000637844 POLR3AO14802 1390 aaPredicted RBP8.38□□□□□ -1.07
CACNA1D-227ENST00000637844 ZNF692Q9BU19 519 aaPredicted RBP8.38□□□□□ -1.07
CACNA1D-227ENST00000637844 PDE3BQ13370 1112 aa8.37□□□□□ -1.07
CACNA1D-227ENST00000637844 TNNT2P45379 298 aaPredicted RBP8.36□□□□□ -1.07
CACNA1D-227ENST00000637844 FMN2Q9NZ56 1722 aa8.36□□□□□ -1.07
CACNA1D-227ENST00000637844 CPSF1Q10570 1443 aaKnown RBP8.36□□□□□ -1.07
CACNA1D-227ENST00000637844 SMG6Q86US8 1419 aaKnown RBP8.36□□□□□ -1.07
CACNA1D-227ENST00000637844 SHPRHQ149N8 1683 aa8.35□□□□□ -1.07
CACNA1D-227ENST00000637844 NGEFQ8N5V2 710 aa8.35□□□□□ -1.07
CACNA1D-227ENST00000637844 GGNBP2Q9H3C7 697 aa8.35□□□□□ -1.07
CACNA1D-227ENST00000637844 NUDCQ9Y266 331 aa8.35□□□□□ -1.07
CACNA1D-227ENST00000637844 ANKARQ7Z5J8 1434 aa8.35□□□□□ -1.07
CACNA1D-227ENST00000637844 NALCNQ8IZF0 1738 aa8.34□□□□□ -1.07
CACNA1D-227ENST00000637844 FYB1O15117 783 aa8.34□□□□□ -1.07
CACNA1D-227ENST00000637844 KCNA6P17658 529 aa8.34□□□□□ -1.07
CACNA1D-227ENST00000637844 MTHFSP49914 203 aa8.34□□□□□ -1.07
CACNA1D-227ENST00000637844 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.34□□□□□ -1.07
CACNA1D-227ENST00000637844 ADAMTS8Q9UP79 889 aa8.34□□□□□ -1.07
CACNA1D-227ENST00000637844 NWD1Q149M9 1564 aa8.34□□□□□ -1.07
CACNA1D-227ENST00000637844 NRKQ7Z2Y5 1582 aa8.34□□□□□ -1.07
CACNA1D-227ENST00000637844 PLEKHG3A1L390 1219 aa8.33□□□□□ -1.08
CACNA1D-227ENST00000637844 PELP1Q8IZL8 1130 aaKnown RBP8.33□□□□□ -1.08
CACNA1D-227ENST00000637844 COG3Q96JB2 828 aa8.33□□□□□ -1.08
CACNA1D-227ENST00000637844 PNNQ9H307 717 aaKnown RBP8.33□□□□□ -1.08
CACNA1D-227ENST00000637844 AEBP2Q6ZN18 517 aaPredicted RBP8.32□□□□□ -1.08
CACNA1D-227ENST00000637844 C14orf37Q86TY3 774 aa8.32□□□□□ -1.08
CACNA1D-227ENST00000637844 NGDNQ8NEJ9 315 aaKnown RBP8.32□□□□□ -1.08
CACNA1D-227ENST00000637844 SALL2Q9Y467 1007 aaPredicted RBP8.32□□□□□ -1.08
CACNA1D-227ENST00000637844 SUPT16HQ9Y5B9 1047 aaKnown RBP8.32□□□□□ -1.08
CACNA1D-227ENST00000637844 RGPD8O14715 1765 aaPredicted RBP8.32□□□□□ -1.08
CACNA1D-227ENST00000637844 NKTRP30414 1462 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms