RNA–Protein interactions for RNA: ENST00000637568.1

ARID1B-227, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 5

Gene ARID1B, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-227ENST00000637568 SDF4Q9BRK5 362 aa15.38■□□□□ 0.05
ARID1B-227ENST00000637568 COG3Q96JB2 828 aa15.37■□□□□ 0.05
ARID1B-227ENST00000637568 VGFO15240 615 aaPredicted RBP15.37■□□□□ 0.05
ARID1B-227ENST00000637568 TRIM29Q14134 588 aa15.37■□□□□ 0.05
ARID1B-227ENST00000637568 CUX1P39880 1505 aa15.37■□□□□ 0.05
ARID1B-227ENST00000637568 AK7Q96M32 723 aa15.36■□□□□ 0.05
ARID1B-227ENST00000637568 ZNF330Q9Y3S2 320 aaPredicted RBP15.36■□□□□ 0.05
ARID1B-227ENST00000637568 ERC2O15083 957 aa15.36■□□□□ 0.05
ARID1B-227ENST00000637568 AKAP17AQ02040 695 aaKnown RBP15.36■□□□□ 0.05
ARID1B-227ENST00000637568 FKBP5Q13451 457 aaPredicted RBP15.36■□□□□ 0.05
ARID1B-227ENST00000637568 RUFY1Q96T51 708 aa15.36■□□□□ 0.05
ARID1B-227ENST00000637568 TAF3Q5VWG9 929 aa15.35■□□□□ 0.05
ARID1B-227ENST00000637568 SYNE3Q6ZMZ3 975 aa15.35■□□□□ 0.05
ARID1B-227ENST00000637568 C9orf78Q9NZ63 289 aaPredicted RBP15.35■□□□□ 0.05
ARID1B-227ENST00000637568 MLECQ14165 292 aa15.35■□□□□ 0.05
ARID1B-227ENST00000637568 ERCC4Q92889 916 aaPredicted RBP15.35■□□□□ 0.05
ARID1B-227ENST00000637568 CADPSQ9ULU8 1353 aa15.35■□□□□ 0.05
ARID1B-227ENST00000637568 CCDC192P0DO97 292 aa15.35■□□□□ 0.05
ARID1B-227ENST00000637568 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.35■□□□□ 0.05
ARID1B-227ENST00000637568 NBPF8Q3BBV2 869 aa15.34■□□□□ 0.05
ARID1B-227ENST00000637568 CCP110O43303 1012 aa15.34■□□□□ 0.05
ARID1B-227ENST00000637568 FIBPO43427 364 aa15.34■□□□□ 0.05
ARID1B-227ENST00000637568 NUTM2DQ5VT03 806 aaPredicted RBP15.34■□□□□ 0.05
ARID1B-227ENST00000637568 PDCL2Q8N4E4 241 aa15.34■□□□□ 0.05
ARID1B-227ENST00000637568 IGF1RP08069 1367 aa15.34■□□□□ 0.05
ARID1B-227ENST00000637568 BCL11BQ9C0K0 894 aaPredicted RBP15.34■□□□□ 0.05
ARID1B-227ENST00000637568 WDR97A6NE52 1622 aa15.34■□□□□ 0.05
ARID1B-227ENST00000637568 PDS5BQ9NTI5 1447 aa15.34■□□□□ 0.05
ARID1B-227ENST00000637568 NGDNQ8NEJ9 315 aaKnown RBP15.34■□□□□ 0.05
ARID1B-227ENST00000637568 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.33■□□□□ 0.05
ARID1B-227ENST00000637568 CT47B1P0C2W7 299 aaPredicted RBP15.33■□□□□ 0.05
ARID1B-227ENST00000637568 WDR33Q9C0J8 1336 aaKnown RBP15.33■□□□□ 0.05
ARID1B-227ENST00000637568 DHX8Q14562 1220 aaKnown RBP15.33■□□□□ 0.04
ARID1B-227ENST00000637568 MTHFSP49914 203 aa15.33■□□□□ 0.04
ARID1B-227ENST00000637568 CDR1P51861 262 aa15.33■□□□□ 0.04
ARID1B-227ENST00000637568 KINO60870 393 aaKnown RBP15.32■□□□□ 0.04
ARID1B-227ENST00000637568 LEKR1Q6ZMV7 388 aa15.32■□□□□ 0.04
ARID1B-227ENST00000637568 SPC24Q8NBT2 197 aa15.32■□□□□ 0.04
ARID1B-227ENST00000637568 H0YHG0 523 aa15.32■□□□□ 0.04
ARID1B-227ENST00000637568 EXOSC9Q06265 439 aaKnown RBP15.32■□□□□ 0.04
ARID1B-227ENST00000637568 PSMA5P28066 241 aa15.32■□□□□ 0.04
ARID1B-227ENST00000637568 NEXNQ0ZGT2 675 aa15.32■□□□□ 0.04
ARID1B-227ENST00000637568 FBXW7Q969H0 707 aa15.32■□□□□ 0.04
ARID1B-227ENST00000637568 CCDC27Q2M243 656 aa15.31■□□□□ 0.04
ARID1B-227ENST00000637568 ERCC6Q03468 1493 aa15.31■□□□□ 0.04
ARID1B-227ENST00000637568 CSB-PGBD3P0DP91 1061 aa15.31■□□□□ 0.04
ARID1B-227ENST00000637568 TEFQ10587 303 aa15.31■□□□□ 0.04
ARID1B-227ENST00000637568 MVPQ14764 893 aaKnown RBP15.31■□□□□ 0.04
ARID1B-227ENST00000637568 ANKRD50Q9ULJ7 1429 aa15.31■□□□□ 0.04
ARID1B-227ENST00000637568 G3BP1Q13283 466 aaKnown RBP eCLIP15.3■□□□□ 0.044e-8■□□□□ 9.8
ARID1B-227ENST00000637568 LTV1Q96GA3 475 aaPredicted RBP15.3■□□□□ 0.04
ARID1B-227ENST00000637568 TRDNQ13061 729 aa15.3■□□□□ 0.04
ARID1B-227ENST00000637568 MPNDQ8N594 471 aa15.3■□□□□ 0.04
ARID1B-227ENST00000637568 ZMYND15Q9H091 742 aa15.3■□□□□ 0.04
ARID1B-227ENST00000637568 ARAP1Q96P48 1450 aa15.3■□□□□ 0.04
ARID1B-227ENST00000637568 CCDC47Q96A33 483 aaKnown RBP15.29■□□□□ 0.04
ARID1B-227ENST00000637568 JPH4Q96JJ6 628 aa15.29■□□□□ 0.04
ARID1B-227ENST00000637568 PCMTD1Q96MG8 357 aaPredicted RBP15.29■□□□□ 0.04
ARID1B-227ENST00000637568 OLFM4Q6UX06 510 aa15.29■□□□□ 0.04
ARID1B-227ENST00000637568 APPP05067 770 aa15.29■□□□□ 0.04
ARID1B-227ENST00000637568 ATF7IPQ6VMQ6 1270 aa15.29■□□□□ 0.04
ARID1B-227ENST00000637568 WDR63Q8IWG1 891 aa15.29■□□□□ 0.04
ARID1B-227ENST00000637568 ZNF644Q9H582 1327 aaPredicted RBP15.29■□□□□ 0.04
ARID1B-227ENST00000637568 GNAI3P08754 354 aa15.28■□□□□ 0.04
ARID1B-227ENST00000637568 CNTROBQ8N137 903 aa15.28■□□□□ 0.04
ARID1B-227ENST00000637568 HFM1A2PYH4 1435 aa15.28■□□□□ 0.04
ARID1B-227ENST00000637568 CHD1LQ86WJ1 897 aa15.28■□□□□ 0.04
ARID1B-227ENST00000637568 C11orf95C9JLR9 678 aaPredicted RBP15.27■□□□□ 0.04
ARID1B-227ENST00000637568 MARCH6O60337 910 aa15.27■□□□□ 0.04
ARID1B-227ENST00000637568 CCDC9Q9Y3X0 531 aaKnown RBP15.27■□□□□ 0.04
ARID1B-227ENST00000637568 NCOA2Q15596 1464 aa15.27■□□□□ 0.04
ARID1B-227ENST00000637568 FYCO1Q9BQS8 1478 aa15.27■□□□□ 0.04
ARID1B-227ENST00000637568 MINK1Q8N4C8 1332 aaPredicted RBP15.27■□□□□ 0.04
ARID1B-227ENST00000637568 CASKIN1Q8WXD9 1431 aa15.27■□□□□ 0.04
ARID1B-227ENST00000637568 ATAD2BQ9ULI0 1458 aa15.27■□□□□ 0.04
ARID1B-227ENST00000637568 EIF2S2P20042 333 aaKnown RBP15.27■□□□□ 0.03
ARID1B-227ENST00000637568 CALRP27797 417 aaKnown RBP15.27■□□□□ 0.03
ARID1B-227ENST00000637568 RDXP35241 583 aaKnown RBP15.27■□□□□ 0.03
ARID1B-227ENST00000637568 CLCN1P35523 988 aa15.27■□□□□ 0.03
ARID1B-227ENST00000637568 PDE4CQ08493 712 aa15.27■□□□□ 0.03
ARID1B-227ENST00000637568 PDILTQ8N807 584 aa15.27■□□□□ 0.03
ARID1B-227ENST00000637568 PATL2C9JE40 543 aaKnown RBP15.26■□□□□ 0.03
ARID1B-227ENST00000637568 SMC2O95347 1197 aa15.26■□□□□ 0.03
ARID1B-227ENST00000637568 SAFBQ15424 915 aaKnown RBP eCLIP15.26■□□□□ 0.03
ARID1B-227ENST00000637568 KRT85P78386 507 aa15.26■□□□□ 0.03
ARID1B-227ENST00000637568 CLASRPQ8N2M8 674 aaKnown RBP15.26■□□□□ 0.03
ARID1B-227ENST00000637568 UBTFL1P0CB47 393 aaPredicted RBP15.26■□□□□ 0.03
ARID1B-227ENST00000637568 AEBP1Q8IUX7 1158 aa15.25■□□□□ 0.03
ARID1B-227ENST00000637568 TBC1D2Q9BYX2 928 aa15.25■□□□□ 0.03
ARID1B-227ENST00000637568 NOB1Q9ULX3 412 aaKnown RBP15.25■□□□□ 0.03
ARID1B-227ENST00000637568 DDX58O95786 925 aaKnown RBP15.25■□□□□ 0.03
ARID1B-227ENST00000637568 SLFN5Q08AF3 891 aa15.25■□□□□ 0.03
ARID1B-227ENST00000637568 FMNL2Q96PY5 1086 aa15.25■□□□□ 0.03
ARID1B-227ENST00000637568 TNMDQ9H2S6 317 aa15.25■□□□□ 0.03
ARID1B-227ENST00000637568 TSPYL4Q9UJ04 414 aa15.25■□□□□ 0.03
ARID1B-227ENST00000637568 SMARCA4P51532 1647 aa15.25■□□□□ 0.03
ARID1B-227ENST00000637568 GGNBP2Q9H3C7 697 aa15.24■□□□□ 0.03
ARID1B-227ENST00000637568 HMOX1P09601 288 aa15.24■□□□□ 0.03
ARID1B-227ENST00000637568 MCM5P33992 734 aa15.24■□□□□ 0.03
ARID1B-227ENST00000637568 SYCE3A1L190 88 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms